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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0548100 |
| Transcript ID | LotjaGi1g1v0548100.3 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT5G16150.1 plastidic GLC translocator; Swiss-Prot: sp|Q56ZZ7|PLST4_ARATH Plastidic glucose transporter 4; TrEMBL-Plants: tr|G7KUB8|G7KUB8_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi1g1v0548100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107795601..107800977) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTTTTATATTATCTGTTGATGGCTCTTCATTTCATATGTATGTTATCAATGTGTTTATTTCCGTCTAATTATGCTA AGCGAAATTGCATTGCAGATGAAGATGTAGAGGATCTTCTCCCCACTAATACCCTAGGCAAACCTTCTGGAACTGTTCTG CCCTATGTTGGCGTTTCTTGCCTTGGAGCCATTTTATTTGGTTATCATCTTGGGTATGAATTTCATCTCCATTTAGGGTG CATTTGGATAAACAAATTAATTAAGTGCTTATTCATAAGCAGTTATTGCATAAGCGCTTATTCATAAGCTAACTTGATAA GCTTACAAAAATAAGTTCAAAATAGATTATAGGTAGGTATAAGCACTGGTTCATAAGTTAACCAGAGCAGCTTATGAGAA TAAACTCAAAACAACTTATAGGTAGGTTATAGGCTATTTATATAAGCTCTCACAAACACTTGCGTAAACGCTTATGCTAT AAGAGAAGTTCAAATAAGCTCTTCCAAACAGGGTTTTAGTATGTAGTTCAATGGACTTATAATGCAGTGTATCATTTTCT TTATACTGCCATCCAAGTTAAGTGAATGGTGTAAGCCACTTCTTGAAGTTGTAAGTTATAGGCTGCATGATACATACTGG AGTCTTATTTTGAGTTTTTTTTTGTTGTAATGCTGAATTTCATTGGTTATTATTCTTAGGTGGGAAACTCTGATAATGCC CTGTTTGGTGTAGGGTGGTAAATGGTGCTCTTGAGTACCTTGCGAAGGATCTTGGAATCACTCAAAACACTGTACTACAA GGTCTTTTAACTTTGTTGGTTGTAGTTGCAAATGAGCTTCAAGTTTGATTGATTTTATCAGCAAAGACATTGGAGATGTT TGCACAAACACTCTTTCTTATTTTTTACCTCTTATGTTTTCATTTGTAGTGTGTAACAATGAAAGCTTTCAGGATACATG TAAACATAGATTTTTTACTTGTTAATGCTACATTTATATCAACAAGAAAAAGTTTTATGGCATGGAGTTTAGGTAGATTT ATTTATCACTATTAAATGTTTGGCTTATCAAAAAAAACTATTGAATGTTTGTGGAAAATCTACATGTCACTGATCTTTAA ACTCTATATCTCAAAATTTTGTATGCTCCTGCATTTGTTTTTTTCATGATTTTAATGAGTTAAATCCATGAACAGGGTGG ATTGTCAGCACACTACTTGCTGGTGCTACTGTCGGTTCATTCACTGGTGGAGCATTGGCTGACAAATTCGGCCGAACTAG GACTTTTCAGTTGGACGCAATCCCTCTGGCAATCGGAGGATTTCTTTGGTCTGTCATTTGTCCTCAATGTATTGTTTGAT CTTTTATGCAATTTTGAAATCTGACTCTTGAAATTTTAATACATTTACAGTGCTACAGCCCAGAGTGTTCAAACATTAAT CATCGGTCGCTTGCTAGCTGGTATAGGAATTGGTGTTACATCTGCAATTGTACCACTGTACATATCTGAGGTTGTCTCTT TGTAAATTATTTAACCCTTTGTGACAATGTTTGCATATTTTAGAAGAACTACATGCTCATGGTGACTCCTTGTGATTTAC AGATTTCTCCTACTGAAATTCGTGGTGCTCTTGGATCTGTTAATCAACTTTTTATATGTATTGGGATTCTTGCAGCACTA GTGGCTGGTTTACCTCTGGCAGGAAATCCTACATGGTATTGGGTTGTTTCATCTTGCCATTTTTTTCAGCTGTTTGTTTC TTCTGAGGATAATGATCATCTAGAGAGCTTGTATATTCATTATATAAGTTAGTCAAATTACTATATTATTAGCTTATTCT ATGTAAAATTTTAGAAGTCAAAGAAATCATTATGAGAAAGAGAGTGGAGAAATATGTATTAGTCATTGTTAATTTTCTTT AATGTGTGTAAATTTTCGCTCCCTTTATCATTTTTTTCTTCTGATTCTGTCCCTGTCTCATCAGTAGTATGTGCATTGTA TTACTTGGAGGATCTGGAATAATTTGTTGATTTGTTTCTTATAAATTTGTTGTTGTCGTACTAGAGGTGGTAGAAACCAT GGAATTTGTTTTTCATTGTGAACACTAAGTTGGTTCCCTGTAATTGGCTTTGTGAATTTATGTTCGTTAACATGTGCTCT CTTCTACCTTATGTAACTTTTATTAGGTGGAGGACAATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTTGG AATGGCAATTTCTCCAGAAAGCCCCCGGTGGCTTTATCAGGTAAGGCTGTCCTTCAATACTATGTTTTCTTTTGTCATGG GAACAATACACTTAGATGACAAGGAAAACTACTGTTGCAAAATGATAGGTACGTGGTTTAGTTAGTTAAGTGAGGTAGTT ATCATATAATTAGATAGTTAGTTAAGAGGGTTAGTAAGGCTTGCTGCCTATAAATAAGAAGGGGTTAGGGAACATTAATC ATCTTTTGTATTCTGTTGGAATTGGGGTTTAGGGAGAGCATTGGGTTTCTCTCTAGGTTTTGGAAGAGTGTTTGGCATTT CTGCTCTAATTCCCAAATTAGGGATTAGGGTTCTTCAATAATACATCTACAATTTCTGGTTTCTATCACAAAACTATACA TTCTCTAAGTTTATTTCCTATTCATTTCACATGCCTATTTGCAAATACACTACTAGCTTTTTTAAAGAAAAGAGCACGTG TTACTTTCTAAGTCTCTATTGACATCCTTAAAAATTTTAAATGGATTAAAATTTAGAGTGATGGTAGTCGTGCACAATCT TAATCCAATGAAAAAGATATGAGCATTTATATGGTGTCGAGTTCTTTTGAAGCGTACATCATTAAGAGTTTAGCACAATA CAAATAATATTTTTGAATATTTTCTGAGAAGATGACATTTGTAATTTTACAGCAAGGGAAAATCTCTGAAGCTGAAAAGG CTATTAAAACACTGTATGGAAAAGAAAGAGTTGCTTCAGTTATGCATGACTTGGCAGCAGCAAGTCAAGGTTCTTCTGAA CCTGAAGCACGATGGTTTGATTTGTTTAGTAGCCGATATAGGAAAGGTATTCCAAAATCCAAATAGTTAAGACTAATTCC AGATTTGATTAACAATGAACAAAGGTTTTCTAGTTATAAGATCTGTTGCAAAGGACTGTTATTATTTATACCTTCATCAT TTAATTTTATATGCTTGTTTCTATCGGTGCTAATATGCAGCTTTTGAAGTTCTGATCATATATGTATATATAGGGGGCAT ATCAGGTGAGAGGAGTTTTTATTGTGAGAGATGAGAACATTTAATCTTGACGTACAACCATACGTTGGGGATTGAGATTA AAAAAGTCATGTGACCTTTTGTTTTAAGCTTAGCCATTCATGGTTAGATCTAATGGTCAATATTTACTCCTCTCATCTCT CACGATAAGAAGTTCTCTCACCTGATACATTTGCTATATATATGATAGCACAATCTTAGTGATAATTTTCATGGATGGTG ATTCATGGGACTATTGAAGTCAATAGTCTTGCTTCAACCTTAAAGCCAATGCTTAGTGATATATGATACCTCATGCATGA GACTGTCTTTTACTTTTTGAATTTGTTCACAACTTACTTTTCTTTTTAGTCTTTTGCCTGATAGCATAGAGGTATATCTT AAATAATATCTCAGCATATTTTATGTTTAAGTTCCACTGCTCAACTTCTTTTTAGTTTGTTCCGGAATTGATTCGTGGTT AATGAATTGGTGTAGCACTTCTCTGAAATATTCCTTGCTGCAGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAGCA GTTTGCTGGAATCAATGCCGTGGTATATTACTCAACTTCTGTTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCCGCAA GTGCCCTGGTTGGTGCATCAAATGTTTTTGGCAAGTACTTTGCATTCTAAAAAGTGAATTATGCTCAAACATTATATTGT TTCTCACTAATGTTTGATTTTGTTGCAGGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTCCT TATCACAAGCTTTAGTGGGATGGTAATGAATATTTTCGAATCACTTCTTTGAATCACATTCTTTGAGAATCATATTTTTG AATCACATTTGTCTTTCCCAGGCTGCTTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTCTC TGGCACACTAGAGGTCATCGGCACTGTCCTGTAAGTCATAAAATTTTGTCAATAAAACTAATTCCATTAACAGAGAAGCT ACCTGGTGTTGTTTGTTTTTCATTTCACCTCTAACTTTGTTATATGAATTTTGAGCAGCTATGTCTTATCTTTCTCTCTT GGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGATATTTGCATCTAGGATCAGAGCAAAAGCAATTTCTTTATCATT AGGCACACATTGGGTAAGTGACTTAATTGGAATCTTGTATCACCTGTAATTCCTTCCCTTATCCTGCTATTAAAAAACCT GAGTGAATAGTCACTTTCGCCCTTAAAAGTTATGAGGTCGGTCGACTTAGTCTCGGAAATATGGAAATAGACAAAATAGT CACTGAAAGATAAAAGGCATTCAATTTATTCCTTGAAAGATGAAAATCACGATCAATATATTGAAAGATTAAATTGAAAT TTGATTTCTCATCTTTGAGGGACTATTTTGTTTATTTGCTTAGTAGGGGATGAAACTGACCGATCTTATATTCATGGACT AAAGTGACTATTTACTCAAAAAACTCACCATTGAGATGCTAAAATGATAGCTTAAGTGGTATTTTTAAATGGTAGGGTGG CATCCTAATTGTGAGCTTACCAAACCAAAATTTTGCTTCTTAGAGAATGAAGTAACCAAAAACCATAGAGAAGCCATACT AAACTCAGCCATACAACTTTGCTTGTGCCTGCTGCTACTCTTGAATGATACATAAATAAAGAAACATTTCCTAGAAAATA ACTTCTGCTGCTAGCTCTATTGTGCCTACAAAGTTTCTTGGACTTGTTGAGATGATATATACTGCATTAGTTTTATGGGC ACACTGATTTTATTGGTTACTTGAACATTATGCTAATGATGAAAAATGTGGAATTTTTGTTTTTATCTTATCAGATCTCC AACTTTGTCATCGGACTCTATTTCTTGAGTGTTGTAGACAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTACTGT GTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACGTTGTGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGTGCTC TTAGTCCTGCTAGTTAA
CDS sequence (LotjaGi1g1v0548100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTTCATTTCATATGTATGTTATCAATGTGTTTATTTCCGTCTAATTATGCTAAGCGAAATTGCATTGCAGATGA AGATGTAGAGGATCTTCTCCCCACTAATACCCTAGGCAAACCTTCTGGAACTGTTCTGCCCTATGTTGGCGTTTCTTGCC TTGGAGCCATTTTATTTGGTTATCATCTTGGGGTGGTAAATGGTGCTCTTGAGTACCTTGCGAAGGATCTTGGAATCACT CAAAACACTGTACTACAAGGGTGGATTGTCAGCACACTACTTGCTGGTGCTACTGTCGGTTCATTCACTGGTGGAGCATT GGCTGACAAATTCGGCCGAACTAGGACTTTTCATGCTACAGCCCAGAGTGTTCAAACATTAATCATCGGTCGCTTGCTAG CTGGTATAGGAATTGGTGTTACATCTGCAATTGTACCACTGTACATATCTGAGATTTCTCCTACTGAAATTCGTGGTGCT CTTGGATCTGTTAATCAACTTTTTATATGTATTGGGATTCTTGCAGCACTAGTGGCTGGTTTACCTCTGGCAGGAAATCC TACATGGTGGAGGACAATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTTGGAATGGCAATTTCTCCAGAAA GGAAAATCTCTGAAGCTGAAAAGGCTATTAAAACACTGTATGGAAAAGAAAGAGTTGCTTCAGTTATGCATGACTTGGCA GCAGCAAGTCAAGGTTCTTCTGAACCTGAAGCACGATGGTTTGATTTGTTTAGTAGCCGATATAGGAAAGTTGTCAGTGT AGGGGCAGCACTTTTCTTGTTCCAGCAGTTTGCTGGAATCAATGCCGTGGTATATTACTCAACTTCTGTTTTTCGCAGTG CTGGAATTGCTTCGGACGTTGCCGCAAGTGCCCTGGTTGGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAAGGAAGG AAAAGCCTCCTTATCACAAGCTTTAGTGGGATGGCTGCTTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAGGTCCT TGCACCATTCTCTGGCACACTAGAGGTCATCGGCACTGTCCTCTATGTCTTATCTTTCTCTCTTGGTGCCGGTCCCGTGC CTGCCCTTCTTCTACCAGAGATATTTGCATCTAGGATCAGAGCAAAAGCAATTTCTTTATCATTAGGCACACATTGGATC TCCAACTTTGTCATCGGACTCTATTTCTTGAGTGTTGTAGACAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTAC TGTGTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACGTTGTGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGTG CTCTTAGTCCTGCTAGTTAA
Protein sequence (LotjaGi1g1v0548100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALHFICMLSMCLFPSNYAKRNCIADEDVEDLLPTNTLGKPSGTVLPYVGVSCLGAILFGYHLGVVNGALEYLAKDLGIT QNTVLQGWIVSTLLAGATVGSFTGGALADKFGRTRTFHATAQSVQTLIIGRLLAGIGIGVTSAIVPLYISEISPTEIRGA LGSVNQLFICIGILAALVAGLPLAGNPTWWRTMFGITVVPSILLALGMAISPERKISEAEKAIKTLYGKERVASVMHDLA AASQGSSEPEARWFDLFSSRYRKVVSVGAALFLFQQFAGINAVVYYSTSVFRSAGIASDVAASALVGTIVASSLMDRQGR KSLLITSFSGMAASMLLLSLAFTWKVLAPFSGTLEVIGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAISLSLGTHWI SNFVIGLYFLSVVDKFGISTVYLGFSTVCLLAVLYIAGNVVETKGRSLEEIERALSPAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 19 | 19 | - | – | |
| Phobius | 2 | 13 | 12 | - | – | |
| Phobius | 14 | 21 | 8 | - | – | |
| PANTHER | 20 | 457 | 438 | 2.6E-246 | – | |
| PANTHER | 20 | 457 | 438 | 2.6E-246 | – | |
| Phobius | 22 | 44 | 23 | - | – | |
| TIGRFAM | 30 | 451 | 422 | 9.5E-78 | ||
| SUPERFAMILY | 34 | 452 | 419 | 5.89E-56 | ||
| Gene3D | 40 | 456 | 417 | 4.4E-104 | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 45 | 66 | 22 | - | – | |
| ProSiteProfiles | 48 | 444 | 397 | 28.541 | ||
| CDD | 51 | 442 | 392 | 8.88419E-123 | – | |
| Pfam | 52 | 454 | 403 | 1.5E-82 | ||
| PRINTS | 56 | 66 | 11 | 8.7E-24 | ||
| Phobius | 67 | 86 | 20 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 87 | 108 | 22 | - | – | |
| Phobius | 109 | 127 | 19 | - | – | |
| TMHMM | 127 | 149 | 23 | - | – | |
| Phobius | 128 | 149 | 22 | - | – | |
| PRINTS | 128 | 147 | 20 | 8.7E-24 | ||
| ProSitePatterns | 133 | 158 | 26 | - | ||
| Phobius | 150 | 160 | 11 | - | – | |
| Phobius | 161 | 183 | 23 | - | – | |
| TMHMM | 162 | 184 | 23 | - | – | |
| Phobius | 184 | 188 | 5 | - | – | |
| Phobius | 189 | 211 | 23 | - | – | |
| TMHMM | 189 | 211 | 23 | - | – | |
| Phobius | 212 | 263 | 52 | - | – | |
| Phobius | 264 | 284 | 21 | - | – | |
| TMHMM | 264 | 286 | 23 | - | – | |
| PRINTS | 275 | 285 | 11 | 8.7E-24 | ||
| Phobius | 285 | 289 | 5 | - | – | |
| Phobius | 290 | 311 | 22 | - | – | |
| TMHMM | 296 | 315 | 20 | - | – | |
| Phobius | 312 | 322 | 11 | - | – | |
| TMHMM | 322 | 344 | 23 | - | – | |
| Phobius | 323 | 344 | 22 | - | – | |
| Phobius | 345 | 355 | 11 | - | – | |
| TMHMM | 356 | 378 | 23 | - | – | |
| Phobius | 356 | 378 | 23 | - | – | |
| PRINTS | 356 | 377 | 22 | 8.7E-24 | ||
| PRINTS | 379 | 391 | 13 | 8.7E-24 | ||
| Phobius | 379 | 389 | 11 | - | – | |
| TMHMM | 390 | 412 | 23 | - | – | |
| Phobius | 390 | 410 | 21 | - | – | |
| Phobius | 411 | 415 | 5 | - | – | |
| Phobius | 416 | 437 | 22 | - | – | |
| TMHMM | 416 | 438 | 23 | - | – | |
| Phobius | 438 | 459 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0548100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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