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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0566100 |
| Transcript ID | LotjaGi1g1v0566100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1K764|I1K764_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0566100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109958117..109959258) extracted from Lotus japonicus Gifu genome v1.2.
ATGCTAACCTTGCTCTTACAGAAGAGGTGGGTTCAAACGATTTACTGTTGGCATGTACTTTAACAGAATATTTATAGAAG ATATTGGCACAATATAATTCTCAATGTTATTCAATTTATTGAAACTAACATGTGCTTGATGATACTCTCTTGTAGAGTCC AAAGTTCAAATTCTATGATCCGAAGACACCCATTTTCACATCTCCAGGATTCCTTCCTCCTACAAAGATTGATAAATGTC GGGTATGATAATCTATCTTTCATCAAGCTAGTAGTGTCATGAGATGTCTTGCTTATTCTGTTTTGAATTGTTTTGGTAGG TTGTCGATGCCATTATCTCCCATGGATGTTTCCTGCGAGAATGCACTGTCCAACACTCCATTGTAGGTGAACGCTCACGT TTAGATTATGGTGTTGATCTTCAGGTAAAGTGGCATAAATTCTAGAATCTAGATCAGCACGCTTAAACATTTTATTTAAG ACACATCCTAACTGTAAAATCACCATTCACAGGACACCATAATGATGGGAGCAGATTATTACCAAACTGAATCTGAAATT GCTTCTCTGCTGGCAGAGGGGAAGGTCCCTATTGGGATCGGACGAAATACCAAAATCAGGTAACTTTTTTCTCCTGTAGC ATGTTTTGATCAGCTTCTATTTCCTTAGAATCAATTCTAAATCAGAACAGCTTCTCACCAGAATTGATTTTGACTTTAGA ATCAATTGAAAGAATTTTCAAACATGTCATGGGTCAATGATGAAAAATTAGCATTGTCACATACCAATTCTATTTATTAT TGCCAACTCATAGTCATGAAATTGTTACATTATGTATCATCTATGTTGAAGGAACTGTATTATAGACAAGAATGCAAAGA TTGGGAAAGATGTCATCATCACCAACAAAGATGTAAGCATGATTACTACTACTCTTTCTGACCATGCTATTTCAAGCAAC TAGTAGTTTTCTGGTTCAGTACCATTGTGTTGTACCTATGATAAGTATCCTATTTATGGTGTCAAACGCATTCTCTGCAG GGCGTTCAAGAAGCGGATAGATCAGAAGATGGGTTTTACATTCGATCAGGAATCACCATTGTAATGGAGAAGGCAACAAT AGAAGATGGCACAGTCATATAA
CDS sequence (LotjaGi1g1v0566100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGGAGCAGATTATTACCAAACTGAATCTGAAATTGCTTCTCTGCTGGCAGAGGGGAAGGTCCCTATTGGGATCGG ACGAAATACCAAAATCAGGAACTGTATTATAGACAAGAATGCAAAGATTGGGAAAGATGTCATCATCACCAACAAAGATG GCGTTCAAGAAGCGGATAGATCAGAAGATGGGTTTTACATTCGATCAGGAATCACCATTGTAATGGAGAAGGCAACAATA GAAGATGGCACAGTCATATAA
Protein sequence (LotjaGi1g1v0566100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMGADYYQTESEIASLLAEGKVPIGIGRNTKIRNCIIDKNAKIGKDVIITNKDGVQEADRSEDGFYIRSGITIVMEKATI EDGTVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 86 | 86 | 1.9E-51 | – | |
| Gene3D | 1 | 86 | 86 | 7.4E-30 | – | |
| PANTHER | 1 | 86 | 86 | 1.9E-51 | – | |
| SUPERFAMILY | 2 | 86 | 85 | 3.24E-14 | ||
| Pfam | 26 | 49 | 24 | 7.2E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0566100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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