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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0642800 |
| Transcript ID | LotjaGi1g1v0642800.3 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamate dehydrogenase; TAIR: AT5G18170.1 glutamate dehydrogenase 1; Swiss-Prot: sp|Q43314|DHE1_ARATH Glutamate dehydrogenase 1; TrEMBL-Plants: tr|A0A142F3D2|A0A142F3D2_ARAHY Glutamate dehydrogenase; Found in the gene: LotjaGi1g1v0642800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120003902..120008515) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATGCACTAGCAGCCACCAACAGGAACTTTAGGTTGGCCTCTCGGCTTCTTGGATTGGATTCCAAGCTTGAGAAAAG TTTGCTGATTCCATTCAGGGAAATCAAGGCAAGCAGAACTGTTCCTTGTGTTTCTCAATACTTTGTTCTTGAAAATTAGT TTAGTTTACTACTCTTGTTTTCCATGTTCTGTTCCATTTAGCTCACCAACTCTGGTTTCTAAACATTGTTTCATGAAAAT ACAGGTGGAATGTACCATACCTAAAGACGACGGCACGTTGCAATCTTATGTTGGGTTCAGGATTCAACATGATAATGCAA GAGGCCCTATGAAAGGAGGAATCAGATACCATCCTGAGGTTATTTCTATTTCAACACTGAAAATTTTCAGTTACTAATTA CTTAAGGGTTTAGTTATGGTTCTTGTAAGGATAGGCATTCTTTTGATTGAATGAGTCCAGCACTGAGTTGCTATCAGGTT TTTGTAAATGATGATAATTTGGTTTGCTTTTCTAAAATTTATATACCTTGGACAGAAATAAAACAAGTTGTAGGAATAAT TTCTACTGAACAACCATATAATGATTACAGACATTTAGAATTAAGCACTAAACATTGCATTTTTTTATGAACTAGTCACA GGAAGTGTTTTAGGTACTATTCTGTTAGCTTTAGGCTTTCAGTTCTCATTCTGAATCATTTATTGGATTAAGTAGGTTGA CCCAGATGAAGTGAATGCTTTAGCACAACTAATGACATGGAAAACAGCTGTAGCAAATATACCATATGGTGGTGCCAAAG GAGGAATTGGCTGTAACCCAGGAGAGTTAAGCATATCTGAGTTAGAAAGACTTACAAGAGTTTTTACCCAGAAAATTCAT GATCTGATTGGAACTCACACTGATGTTCCAGCACCTGATATGGGGACAGGGCCACAGGTCAGTAAAGAGATGTGGAACTT GGAAGTGAATCTGCTGCTGTTTGATTAAGATTATACTTTTGATTATGTCTTAGTTAATTTATATTTGACTTGAATATGTT ATTGGCTAGTATTGTTTATGGTTTCATATGATTCTATTGTGTTGTTGTGCATGCAGACCATGGCATGGATACTAGATGAG TATTCCAAATTTCATGGTTATTCTCCTGCTGTAGTGACTGGAAAACCAATAGTAAGTAATTGTTTGTGTTTGTGTTTGTG TTTGTATTTCATTTTAATAGTCATTGAACTTATAACACCAAACCACGATTAATTAAACATTCCCTTTGCTATATCTTTTT CAAACCAGGATCTTGGTGGGTCTCTAGGAAGAGACGCAGCAACAGGACGAGGAGTCCTCTTTGCAACAGAGGCTTTGCTT AATGAGCATGGGAAGAGTGTATCGGGACAACGGTTTGTCATACAGGTACTACTTTTGCCTTGTATATTACTCCCATTGAT CTCTATGCAAGTGAAAGTAGCATGCATGCAGCCGAAATTGCTGTCACAATGCCAATGCTTGAACCCCAAAACCCTTTACG TTGCGGTCGCAATTGCGGTTGCGGATGACAATTTAAAACTATGAGCTCCCAAGAGTTGATGAACACACATAATAATAACA ATTGGAATATTGCATTATATCTTATAGCATGCATGCTTCTACAATTGATTCTAGAGTCATAGTCAATTGTGGAGAAGCTT TTGTGAGTAGCTTTTGGGTGCCACAATTGATTTAGAGGAAAAAGAAGCCGATCCAAGCATGCTAATAAGAAGTTCTACGA TATGGTATTTTGATGAATTCGATATATACTCATGGTATCATATATTCATATTGTGTACTTTTCTTCAGGGTTTTGGAAAT GTGGGGTCTTGGGCTGCCCAATTGATTAGTGAGAAAGGTGGAAAAGTTGTTGCTGTGAGTGATGTAACTGGAGCCATTAA GAACAGCGAAGGCATTGACATACCAAGCCTACTCCAGCATTCCAAAGAGCACAAAGGTGTAAAAGGATTCCACGGTGGTG ATACAATTGATCCTCAATCAATTTTGGTTGAAGATTGTGATGTTCTAATCCCAGCAGCACTTGGGGGTGTCATCAATAGG TACTTTTCTTTACTTGTAGAAAATTTTTGTCCTTAACTCAGACAAAAAAGAGGGCACCTCAAATATTAGATTATTTTAAC AAAGTGAAGAGTACTGTATTTATCATCATAGCTGACTCTGAAAGCAGACATCAAACTGGACCACCACCCTTTACTCTTTA TTAATTGAGTAAAATACACTCTTCTCCCTTAAGGTTTGTCAAAATGACACCCAACCCCATTCTTAATCAAATTCTACACT CCACCCCACTAAATCTAACAAGTTAACTACATGTTAAAAGATGCTAACGGAATATTCTCTTTAATTCCAAACTAATAAAT TTAAATATTTAAATAATTATAAATTAAAAAAAATCCCTTTATTATTTTTTATTTCAAGAAGTTTAAGATATTTACAATTA AATATTTTCACAATATTGTATAGGAATATCAATAACATTTAAGTTTACAAATATAAATTTAGACTAAACAAATACTTCTA TTTTTCTTTTAACCTATTTTCATGATTAATTGTACTAACAAAATTCCATGATTAATTAGATGACATTGATTCCAATTAAA AGCCCGAAAAAAAATTATGATTGTTCTGGTCACCTTCTCAATTAGTATATTATTAGCTTCATAGATTGGTTGCACTTGCA ACATGCAATATTATCTTAGCAAATAAAATGGAAAATGCAACAAATAAGAGATGGTTGTTACTTGAACTGTTTGGTCTACT AGAATAACTGAATAAGGTATAGTTTCATATCTCAAAAAAAATGGATTTAAATTCTTAATAATCTCAATCACATGATGTTG TATGTCCTCGAATGATAGCTCAAGTGGTAAAAGCTTTGAGATATATGAATTGGGTGTGGGAAGTCTTAGATGATGCAATT TATCTTTTCAATTTACCAATAAAAAATTAAAATATAATTTATATATCTTAAAATTATATAATCCAAGATGAATTTTATGA AGAAAAAAGTCATCTAATATTATAAATTATATTGTGAGAATATTTGTAGCTTTCCTCAACATACATATAATACAGTAAAT AGTTTTAAATAGATTATTACAAAAATATTAATCGTAAATTTCTTAAACTTTTTTAAATAAAAATAACATTAAAATATTTT TTATATTATTTGAAAATTTAAATCTATTAGTTTGGAATGAAAAAGAATATTCCGTGAGCATCTTTTAAGATATACTTAAC TTGGTAAAGTAAGTGGGGTGGAGTGTAGATTTTGATTAAGAATGGGGCTGAGTGTCATATTAGCAAACCTCAAGGGAGGG GAGTGTATTTTACTCTTGTTAATTTAGTACCTTTCTGACAAATGCAAATTGAATTTTATGGTCTGCTCTCCCTAAATGCA TGTTTAGAAATCCTTCTACAATTAATTCTGAAGTCAAAATCAATTCTTGGAAGAAGCTTATGTGAGTAGCTTTTGAGTAT CAGAATTGACTTTGAGAAAAAAGAAGTTTATACAAACATGCATTTAGTCTCTTAAAGCAATATTCTAAAGTTGAATTATA ATAGAGGGAAGTCCTAAAGCTAATTATTTTTTTTGTTTTAAACTTTTGTTCTTGCTATGGTTGAAGGGAAAACGCAAATG AAATCAAGGCCAAGTTTATTGTTGAAGCAGCCAACCACCCCACTGACCCAGAGGCTGATGAGGTTAGTAATATTTTCTCT TTCCTTCTATTTTTTAAAAAAAGAAAGAAGACATTTACACTTGCTAACTACTTTCCCAACATGCAGATCCTGAGGAAAAA AGGTGTTGTGATCCTCCCAGACATATATGCAAATTCAGGAGGCGTTACAGTTAGCTACTTTGAGTGGGTTCAGGTAAGTG TTTTTAGCATGTTTGAATTAACTTAGATCATGTTTGAATTAAATTAGAGCATGTCTGGAAACCATAATCAATTCTATAAA ATCAATTCTACTTTGTCAAAATCAATTCTAACTAGTTGAAATGATGTTTGGGCCACAACTGAATTTCATAGCATTACCCT AAGAAACTCACTTTTTTCATAAAGGTATCCGAACATACATCACATTATTCTAACTCACGTTTACCATACGCAATTATAGT AGAATCAACTTTGTACAAAATCAATTCTGCTTACGCTGATTTAAACACGCTAACTATTTTTTCCCATAATCAATTTTGAC AACCAAAAACTTTTATCCAGAATTGATTTTGGCCTTAGAATCCATTGTAGATGTATTTACGAACATGTACTAAATTTTAT AATGAACAGTGTGATTTAACATTGGCTATAGTATATGTGAAAGGCTTACATTACAATTCAATGAATCTACTCTATATAGT TCTTATATTGTGATTTTGTGGTGCACAGAACATTCAAGGGTTCATGTGGGAAGAGGAGAAAGTGAACAATGAGCTAAAGA AATACATGACCAGAGGTTTCAAAGATGTGAAGGAGATGTGCAAAACCCATGAATGTGATTTTCGTATGGGAGCTTTCACC CTGGGAGTTAACCGTGTGGCACGAGCTACTCTCCTTAGGGGTTGGGAAGCATGA
CDS sequence (LotjaGi1g1v0642800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGCACTAGCAGCCACCAACAGGAACTTTAGGTTGGCCTCTCGGCTTCTTGGATTGGATTCCAAGCTTGAGAAAAG TTTGCTGATTCCATTCAGGGAAATCAAGGTGGAATGTACCATACCTAAAGACGACGGCACGTTGCAATCTTATGTTGGGT TCAGGATTCAACATGATAATGCAAGAGGCCCTATGAAAGGAGGAATCAGATACCATCCTGAGGTTGACCCAGATGAAGTG AATGCTTTAGCACAACTAATGACATGGAAAACAGCTGTAGCAAATATACCATATGGTGGTGCCAAAGGAGGAATTGGCTG TAACCCAGGAGAGTTAAGCATATCTGAGTTAGAAAGACTTACAAGAGTTTTTACCCAGAAAATTCATGATCTGATTGGAA CTCACACTGATGTTCCAGCACCTGATATGGGGACAGGGCCACAGACCATGGCATGGATACTAGATGAGTATTCCAAATTT CATGGTTATTCTCCTGCTGTAGTGACTGGAAAACCAATAGATCTTGGTGGGTCTCTAGGAAGAGACGCAGCAACAGGACG AGGAGTCCTCTTTGCAACAGAGGCTTTGCTTAATGAGCATGGGAAGAGTGTATCGGGACAACGGTTTGTCATACAGGGTT TTGGAAATGTGGGGTCTTGGGCTGCCCAATTGATTAGTGAGAAAGGTGGAAAAGTTGTTGCTGTGAGTGATGTAACTGGA GCCATTAAGAACAGCGAAGGCATTGACATACCAAGCCTACTCCAGCATTCCAAAGAGCACAAAGGTGTAAAAGGATTCCA CGGTGGTGATACAATTGATCCTCAGGAAAACGCAAATGAAATCAAGGCCAAGTTTATTGTTGAAGCAGCCAACCACCCCA CTGACCCAGAGGCTGATGAGATCCTGAGGAAAAAAGGTGTTGTGATCCTCCCAGACATATATGCAAATTCAGGAGGCGTT ACAAACATTCAAGGGTTCATGTGGGAAGAGGAGAAAGTGAACAATGAGCTAAAGAAATACATGACCAGAGGTTTCAAAGA TGTGAAGGAGATGTGCAAAACCCATGAATGTGATTTTCGTATGGGAGCTTTCACCCTGGGAGTTAACCGTGTGGCACGAG CTACTCTCCTTAGGGGTTGGGAAGCATGA
Protein sequence (LotjaGi1g1v0642800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNALAATNRNFRLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYVGFRIQHDNARGPMKGGIRYHPEVDPDEV NALAQLMTWKTAVANIPYGGAKGGIGCNPGELSISELERLTRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKF HGYSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTG AIKNSEGIDIPSLLQHSKEHKGVKGFHGGDTIDPQENANEIKAKFIVEAANHPTDPEADEILRKKGVVILPDIYANSGGV TNIQGFMWEEEKVNNELKKYMTRGFKDVKEMCKTHECDFRMGAFTLGVNRVARATLLRGWEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 276 | 276 | 2.2E-105 | ||
| PANTHER | 1 | 275 | 275 | 1.7E-239 | – | |
| PANTHER | 1 | 275 | 275 | 1.7E-239 | – | |
| SUPERFAMILY | 6 | 178 | 173 | 3.17E-59 | – | |
| Gene3D | 33 | 175 | 143 | 5.8E-59 | – | |
| Pfam | 33 | 159 | 127 | 9.5E-50 | ||
| PRINTS | 88 | 102 | 15 | 1.3E-30 | ||
| ProSitePatterns | 96 | 109 | 14 | - | ||
| PRINTS | 167 | 189 | 23 | 1.3E-30 | ||
| Pfam | 176 | 268 | 93 | 4.2E-26 | ||
| CDD | 176 | 373 | 198 | 2.61248E-95 | ||
| SUPERFAMILY | 176 | 380 | 205 | 1.34E-55 | ||
| Gene3D | 176 | 275 | 100 | 2.2E-30 | – | |
| SMART | 178 | 379 | 202 | 1.2E-58 | ||
| PRINTS | 209 | 229 | 21 | 1.3E-30 | ||
| PIRSF | 269 | 382 | 114 | 4.1E-34 | ||
| Pfam | 272 | 379 | 108 | 3.3E-25 | ||
| PANTHER | 275 | 382 | 108 | 1.7E-239 | – | |
| PANTHER | 275 | 382 | 108 | 1.7E-239 | – | |
| Gene3D | 276 | 381 | 106 | 3.0E-30 | – | |
| PRINTS | 315 | 326 | 12 | 1.3E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0642800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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