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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0642800 |
Transcript ID | LotjaGi1g1v0642800.9 |
Related isoforms 10 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Glutamate dehydrogenase; TAIR: AT5G18170.1 glutamate dehydrogenase 1; Swiss-Prot: sp|Q43314|DHE1_ARATH Glutamate dehydrogenase 1; TrEMBL-Plants: tr|V7CUX4|V7CUX4_PHAVU Glutamate dehydrogenase; Found in the gene: LotjaGi1g1v0642800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120004472..120009813) extracted from Lotus japonicus Gifu genome v1.2.
AATTTTTTAATTGGTACATGAACTTGTGATAAAATATAATATTGTGTAGAAAGAAAGAAGTCATGATGCACAGTACTACC CTGGGACTTGTATTTGTCTTTTTTGGTGTGCTGTCAAGGTGATCATGTTTGAGTTAGAGACATCAATGGTGGGGTTAACT CTCCTACTAGAGGTTTTCTTCATTTACAAAACTCAAATCCGAGACATTAGTTAAAAGGAATTAAACATGTACCACATGAA CCAACCACATGTTTATTGGTAGGATTGTATTTGTCTAAATGAATAATTTATGTTCCTAGCCATTTCGTAGCCATATTGAC AACTATGAAGTTGTGGAAGCAATGAATTTAACTCTCAAAGTGCAATGAACGTAATTAAATATCAGGCCAAGTTACATTAA AACTTGCTAATGGACGGTAGAGATTTGCCTCTTGGATAGAGTATTTTGCTGTCTAGTTCCTACCTCACCTGGATTGTGCC TCTTCAGAAAATTTTGGAGCCAATGAAACTGCCAATTCATACAATTTCTGTTTCATAGAGGTTCCAAAAGAGTTGGACCT TCTTGACGTTGTAGAAAGGTGATTTTCCTTAGATTCTTTTTCTTTTGGAACCTTTAGCAAACGCTTGGCCAGTAGTATCC CATAAGTGTCAAACTGTCAATAAAAGTGGCTACCCAGTTCATTCATAAGCTGTTTAATAAAAGTATATAGTTAAGGCTTC CTGAACATCACAACCGCATTGTAATCTTAAGGAGTTTGATAGGTTTCTGTAACATTTTTTCTTCATGGAGATGTGAAAGA AGGTAAAACACAAAACAGGCACACTATACTGCTGAAGAAGGTAATTAGTAAGCTTCAATGTTCTCATTGTATATTGCACT TTAGAGGCAACTGGGTGATTTATGACATGGCCTTGTATGTGAATACAACAAAATTATATTAAGCTTTTCAAAGAGAGGGT GGTTCACGTTCTTCATTTTCGTTGTCATCCTGATCTTTAGTCATTAACTGCTGAGATTGATCCACATGGCGTTGGTATGA CACATTGGTGGCACTTATCCATTTTGATTTTTGCATATGTGCTTTACCAAACTTTTACTAGTTTATATTTGTTGACGTTT GACTCTAGCAGCTGGCTCTTGTATATCTCTTGATATAAATATTAGTAAAGATGGATCTATTTTCATCTTCCATTGATTTC TAAAGTTCCAATAATAGTAACACTTTACAAGATCTGTTCTCCGCGTCTCTTATATCTCTGTCTGAAAAAGATTGAATATT TTGTCAGGTCTTTCAACCATGAATGCACTAGCAGCCACCAACAGGAACTTTAGGTTGGCCTCTCGGCTTCTTGGATTGGA TTCCAAGCTTGAGAAAAGTTTGCTGATTCCATTCAGGGAAATCAAGGCAAGCAGAACTGTTCCTTGTGTTTCTCAATACT TTGTTCTTGAAAATTAGTTTAGTTTACTACTCTTGTTTTCCATGTTCTGTTCCATTTAGCTCACCAACTCTGGTTTCTAA ACATTGTTTCATGAAAATACAGGTGGAATGTACCATACCTAAAGACGACGGCACGTTGCAATCTTATGTTGGGTTCAGGA TTCAACATGATAATGCAAGAGGCCCTATGAAAGGAGGAATCAGATACCATCCTGAGGTTATTTCTATTTCAACACTGAAA ATTTTCAGTTACTAATTACTTAAGGGTTTAGTTATGGTTCTTGTAAGGATAGGCATTCTTTTGATTGAATGAGTCCAGCA CTGAGTTGCTATCAGGTTTTTGTAAATGATGATAATTTGGTTTGCTTTTCTAAAATTTATATACCTTGGACAGAAATAAA ACAAGTTGTAGGAATAATTTCTACTGAACAACCATATAATGATTACAGACATTTAGAATTAAGCACTAAACATTGCATTT TTTTATGAACTAGTCACAGGAAGTGTTTTAGGTACTATTCTGTTAGCTTTAGGCTTTCAGTTCTCATTCTGAATCATTTA TTGGATTAAGTAGGTTGACCCAGATGAAGTGAATGCTTTAGCACAACTAATGACATGGAAAACAGCTGTAGCAAATATAC CATATGGTGGTGCCAAAGGAGGAATTGGCTGTAACCCAGGAGAGTTAAGCATATCTGAGTTAGAAAGACTTACAAGAGTT TTTACCCAGAAAATTCATGATCTGATTGGAACTCACACTGATGTTCCAGCACCTGATATGGGGACAGGGCCACAGGTCAG TAAAGAGATGTGGAACTTGGAAGTGAATCTGCTGCTGTTTGATTAAGATTATACTTTTGATTATGTCTTAGTTAATTTAT ATTTGACTTGAATATGTTATTGGCTAGTATTGTTTATGGTTTCATATGATTCTATTGTGTTGTTGTGCATGCAGACCATG GCATGGATACTAGATGAGTATTCCAAATTTCATGGTTATTCTCCTGCTGTAGTGACTGGAAAACCAATAGTAAGTAATTG TTTGTGTTTGTGTTTGTGTTTGTATTTCATTTTAATAGTCATTGAACTTATAACACCAAACCACGATTAATTAAACATTC CCTTTGCTATATCTTTTTCAAACCAGGATCTTGGTGGGTCTCTAGGAAGAGACGCAGCAACAGGACGAGGAGTCCTCTTT GCAACAGAGGCTTTGCTTAATGAGCATGGGAAGAGTGTATCGGGACAACGGTTTGTCATACAGGTACTACTTTTGCCTTG TATATTACTCCCATTGATCTCTATGCAAGTGAAAGTAGCATGCATGCAGCCGAAATTGCTGTCACAATGCCAATGCTTGA ACCCCAAAACCCTTTACGTTGCGGTCGCAATTGCGGTTGCGGATGACAATTTAAAACTATGAGCTCCCAAGAGTTGATGA ACACACATAATAATAACAATTGGAATATTGCATTATATCTTATAGCATGCATGCTTCTACAATTGATTCTAGAGTCATAG TCAATTGTGGAGAAGCTTTTGTGAGTAGCTTTTGGGTGCCACAATTGATTTAGAGGAAAAAGAAGCCGATCCAAGCATGC TAATAAGAAGTTCTACGATATGGTATTTTGATGAATTCGATATATACTCATGGTATCATATATTCATATTGTGTACTTTT CTTCAGGGTTTTGGAAATGTGGGGTCTTGGGCTGCCCAATTGATTAGTGAGAAAGGTGGAAAAGTTGTTGCTGTGAGTGA TGTAACTGGAGCCATTAAGAACAGCGAAGGCATTGACATACCAAGCCTACTCCAGCATTCCAAAGAGCACAAAGGTGTAA AAGGATTCCACGGTGGTGATACAATTGATCCTCAATCAATTTTGGTTGAAGATTGTGATGTTCTAATCCCAGCAGCACTT GGGGGTGTCATCAATAGGTACTTTTCTTTACTTGTAGAAAATTTTTGTCCTTAACTCAGACAAAAAAGAGGGCACCTCAA ATATTAGATTATTTTAACAAAGTGAAGAGTACTGTATTTATCATCATAGCTGACTCTGAAAGCAGACATCAAACTGGACC ACCACCCTTTACTCTTTATTAATTGAGTAAAATACACTCTTCTCCCTTAAGGTTTGTCAAAATGACACCCAACCCCATTC TTAATCAAATTCTACACTCCACCCCACTAAATCTAACAAGTTAACTACATGTTAAAAGATGCTAACGGAATATTCTCTTT AATTCCAAACTAATAAATTTAAATATTTAAATAATTATAAATTAAAAAAAATCCCTTTATTATTTTTTATTTCAAGAAGT TTAAGATATTTACAATTAAATATTTTCACAATATTGTATAGGAATATCAATAACATTTAAGTTTACAAATATAAATTTAG ACTAAACAAATACTTCTATTTTTCTTTTAACCTATTTTCATGATTAATTGTACTAACAAAATTCCATGATTAATTAGATG ACATTGATTCCAATTAAAAGCCCGAAAAAAAATTATGATTGTTCTGGTCACCTTCTCAATTAGTATATTATTAGCTTCAT AGATTGGTTGCACTTGCAACATGCAATATTATCTTAGCAAATAAAATGGAAAATGCAACAAATAAGAGATGGTTGTTACT TGAACTGTTTGGTCTACTAGAATAACTGAATAAGGTATAGTTTCATATCTCAAAAAAAATGGATTTAAATTCTTAATAAT CTCAATCACATGATGTTGTATGTCCTCGAATGATAGCTCAAGTGGTAAAAGCTTTGAGATATATGAATTGGGTGTGGGAA GTCTTAGATGATGCAATTTATCTTTTCAATTTACCAATAAAAAATTAAAATATAATTTATATATCTTAAAATTATATAAT CCAAGATGAATTTTATGAAGAAAAAAGTCATCTAATATTATAAATTATATTGTGAGAATATTTGTAGCTTTCCTCAACAT ACATATAATACAGTAAATAGTTTTAAATAGATTATTACAAAAATATTAATCGTAAATTTCTTAAACTTTTTTAAATAAAA ATAACATTAAAATATTTTTTATATTATTTGAAAATTTAAATCTATTAGTTTGGAATGAAAAAGAATATTCCGTGAGCATC TTTTAAGATATACTTAACTTGGTAAAGTAAGTGGGGTGGAGTGTAGATTTTGATTAAGAATGGGGCTGAGTGTCATATTA GCAAACCTCAAGGGAGGGGAGTGTATTTTACTCTTGTTAATTTAGTACCTTTCTGACAAATGCAAATTGAATTTTATGGT CTGCTCTCCCTAAATGCATGTTTAGAAATCCTTCTACAATTAATTCTGAAGTCAAAATCAATTCTTGGAAGAAGCTTATG TGAGTAGCTTTTGAGTATCAGAATTGACTTTGAGAAAAAAGAAGTTTATACAAACATGCATTTAGTCTCTTAAAGCAATA TTCTAAAGTTGAATTATAATAGAGGGAAGTCCTAAAGCTAATTATTTTTTTTGTTTTAAACTTTTGTTCTTGCTATGGTT GAAGGGAAAACGCAAATGAAATCAAGGCCAAGTTTATTGTTGAAGCAGCCAACCACCCCACTGACCCAGAGGCTGATGAG GTTAGTAATATTTTCTCTTTCCTTCTATTTTTTAAAAAAAGAAAGAAGACATTTACACTTGCTAACTACTTTCCCAACAT GCAGATCCTGAGGAAAAAAGGTGTTGTGATCCTCCCAGACATATATGCAAATTCAGGAGGCGTTACAGTTAGCTACTTTG AGTGGGTTCAGGTAAGTGTTTTTAGCATGTTTGAATTAACTTAGATCATGTTTGAATTAAATTAGAGCATGTCTGGAAAC CATAATCAATTCTATAAAATCAATTCTACTTTGTCAAAATCAATTCTAACTAGTTGAAATGA
CDS sequence (LotjaGi1g1v0642800.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGCACTAGCAGCCACCAACAGGAACTTTAGGTTGGCCTCTCGGCTTCTTGGATTGGATTCCAAGCTTGAGAAAAG TTTGCTGATTCCATTCAGGGAAATCAAGGTGGAATGTACCATACCTAAAGACGACGGCACGTTGCAATCTTATGTTGGGT TCAGGATTCAACATGATAATGCAAGAGGCCCTATGAAAGGAGGAATCAGATACCATCCTGAGGTTGACCCAGATGAAGTG AATGCTTTAGCACAACTAATGACATGGAAAACAGCTGTAGCAAATATACCATATGGTGGTGCCAAAGGAGGAATTGGCTG TAACCCAGGAGAGTTAAGCATATCTGAGTTAGAAAGACTTACAAGAGTTTTTACCCAGAAAATTCATGATCTGATTGGAA CTCACACTGATGTTCCAGCACCTGATATGGGGACAGGGCCACAGACCATGGCATGGATACTAGATGAGTATTCCAAATTT CATGGTTATTCTCCTGCTGTAGTGACTGGAAAACCAATAGATCTTGGTGGGTCTCTAGGAAGAGACGCAGCAACAGGACG AGGAGTCCTCTTTGCAACAGAGGCTTTGCTTAATGAGCATGGGAAGAGTGTATCGGGACAACGGTTTGTCATACAGGGTT TTGGAAATGTGGGGTCTTGGGCTGCCCAATTGATTAGTGAGAAAGGTGGAAAAGTTGTTGCTGTGAGTGATGTAACTGGA GCCATTAAGAACAGCGAAGGCATTGACATACCAAGCCTACTCCAGCATTCCAAAGAGCACAAAGGTGTAAAAGGATTCCA CGGTGGTGATACAATTGATCCTCAATCAATTTTGGTTGAAGATTGTGATGTTCTAATCCCAGCAGCACTTGGGGGTGTCA TCAATAGGGAAAACGCAAATGAAATCAAGGCCAAGTTTATTGTTGAAGCAGCCAACCACCCCACTGACCCAGAGGCTGAT GAGATCCTGAGGAAAAAAGGTGTTGTGATCCTCCCAGACATATATGCAAATTCAGGAGGCGTTACAGTTAGCTACTTTGA GTGGGTTCAGTTGAAATGA
Protein sequence (LotjaGi1g1v0642800.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNALAATNRNFRLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYVGFRIQHDNARGPMKGGIRYHPEVDPDEV NALAQLMTWKTAVANIPYGGAKGGIGCNPGELSISELERLTRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKF HGYSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTG AIKNSEGIDIPSLLQHSKEHKGVKGFHGGDTIDPQSILVEDCDVLIPAALGGVINRENANEIKAKFIVEAANHPTDPEAD EILRKKGVVILPDIYANSGGVTVSYFEWVQLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 350 | 350 | 3.0E-231 | – | |
PIRSF | 1 | 352 | 352 | 7.5E-149 | ||
PANTHER | 1 | 350 | 350 | 3.0E-231 | – | |
SUPERFAMILY | 6 | 178 | 173 | 2.59E-59 | – | |
Pfam | 33 | 159 | 127 | 8.0E-50 | ||
Gene3D | 33 | 175 | 143 | 4.8E-59 | – | |
PRINTS | 88 | 102 | 15 | 6.0E-36 | ||
ProSitePatterns | 96 | 109 | 14 | - | ||
PRINTS | 167 | 189 | 23 | 6.0E-36 | ||
CDD | 176 | 350 | 175 | 1.23972E-101 | ||
Pfam | 176 | 350 | 175 | 2.6E-59 | ||
SUPERFAMILY | 176 | 350 | 175 | 4.78E-62 | ||
Gene3D | 176 | 352 | 177 | 2.9E-72 | – | |
SMART | 178 | 352 | 175 | 1.1E-62 | ||
PRINTS | 209 | 229 | 21 | 6.0E-36 | ||
PRINTS | 336 | 347 | 12 | 6.0E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. | ||
Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
Molecular function | Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0642800.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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