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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0769800 |
| Transcript ID | LotjaGi1g1v0769800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT3G05580.1 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|P48490|PP1_PHAVU Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|V7BQZ7|V7BQZ7_PHAVU Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0769800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134210330..134212912) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTACAGTTGGGCCATCTATTCAGTTTCCCATTTCAACAACTAATTTTTCTTTATTTATCTTCTTCCCATTTTCCCCC AAATATTTTGCTTCATTTAATTCACCACCAAAAAGCCTTGTTTGTTTGTTTGTTTGTTCTTCACCTCTTCCATTTTGGGA AATCAAATCCAAAACAAAAGCCAAACCCACAAAACAAAAGCAAAAACAAATCTCAAATTGATTGAAGAAGAAGAAGAAGA GGATGATGATGATGACAATGGAGGGAATGATGGATAAGGGGGTTCTGGATGATGTGATAAGGAGGTTGCTGGAAGGGAAA GGAGGAAAACAGGTGCAGCTCTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCGAGACAAATCTTCCTCTCTCAGCC CAATCTCCTTGAGCTCCGTGCTCCCATTCGAATCTGCGGTTAGTTTTGGTTTCTCTTCCAATTCTCCACAATTTTTCCAC CTTCAAACAAATATCAAAATATATTTCCCTTTTATCTAACCCTTTCCTTTTCAGATTTGAGAGAGTTTCCATATATATCT ATTTACAATTTCACGAATTATGGATACGGAGGATGTGTAAAATATTATAATTATGTAAAAAAATCTATTGTAGATGTCTG TTCTTAATTCAAAAGTGAAGGAAAAATGCTTTGAAGATTTCAAAAAATGAAACTTTACGCTTTTAGGTGTTAGAACACTA TCAATCTTGTGGCAGACAAGCAAAATTGGTTAAAAAAAGGAAGAAGGAAGAGATGTTTGTTAAAAAAAATTGGTTCCTGT AATTGCTGTTCGAATTCTTCGATTCCGAATGCATTCTTTCCTCCATCTGCAATATATTGGGGGAAAATAAGCTTATGCAG ATTTTGTGGCCTATTGATATGAACCTTGTGATATAATATTGTAATTTGCATTCTGATGCAGAAATTGAAGTTGTTCACAA TGCCTTTGTTACGCAGAGTTTCGCTTGTTCCTAAATTTGAAGTTTTCTTTATTGCAGGTGATATACATGGTCAGTACCAA GACTTGCTGAGGCTTTTTGAATATGGTGGCTACCCTCCTTCTGCAAACTACTTGTTTCTGGGGGATTATGTGGACAGAGG GAAGCAAAGTTTAGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCGGACAAAATTTATCTCTTGAGAGGAA ACCATGAGGATGCGAAGATAAACCGGATATATGGCTTCTATGATGAATGCAAAAGGAGGTTCAATGTTAGGCTATGGAAG ATATTTACAGACTGCTTTAACTGTTTGCCGGTGGCTGCGCTCATTGACGAAAAGATAATTTGTATGCATGGAGGACTCTC TCCAGAGTTGCAAAATTTAGATCAGATAAGGGAGGTCACAAGGCCCACCGAAATTCCGGATAATGGTCTCCTTTGTGATC TTCTTTGGTCTGATCCTGATAATAGCATTGAGGGCTGGGCAGACAGTGACCGGGGCGTTTCAATGACTTTTGGACCTGAT GTTGTCGCGGATTTTCTGGAAAAGAATGATCTTGATCTTGTTTGCAGAGGTCATCAGGTAAAACTCTTCCTAATTAAATG AGCTAATTGATCAACTTATACAAGTTCAGAGTGCATGCTTGTATTGGTCCTATAATTCTCCTGATAGCATGTCTGGAAAT CCTTCTAGAATTGGTCCTATAGTGCCTCTAGGTGCTTGAATATATCTGGAAGTAAATAAGCTGATCCAAACATGCTATAT ATTGGTTTGATGAAACTTAAGAGGATCCACTGCATGACTGATAGGTCCTTAGGGCCTTAGCTTCCAGCATTTATCAATTT CTTTTGGAAACAGCTATATCCTTCCAGCACCAACCTATTCTACTTTTAGCTGGAAAAGTTTATAGAATAAATTTTAAGAG TTGAACTCATCTCGATTATTGATACACCTGTTGAAATCAGTTCATTTGCAAGTGCCATACTTTGGATAGTTGTAACTTGT AATGCTCATGATATTCACTGCAAAGCCAAAGACATAGGATTGAAATTAGGATATTTAGCATAACTTACATTGCACTTTTT ACTTTCACATGGCTATAAGCTATATAGACTTTCTTATCTGACATGCATATCGTGTCTAGACAGGGCTCAGTCAAACTATT CACAGGCATTCATTTTCCTTCCTCTTTGTTTTTAATCTTTTTCTTTTTTCGGTTACTTCTTCCAACTTCTACCGATTAAG GTCTCATTTTACTTTCCTTTTTTCTTTTAGGTTGTGGAGGATGGTTATGAGTTTTTTGCGAAACGAAGATTAGTCACGAT ATTTTCTGCTCCAAATTATGGTGGGGAATTTGACAATGCTGGTGCATTGTTGAGCGTGGATGAATCCCTTGTATGTTCCT TCGAGATATTGAAACCCCTTGACAGAGGATCAGGAAGTGGTTCAAAAATGACTCTTAAGAAGGTAAATATCATCTATCAG CTGTTGTAATTTTAAGAATCTTTATATTGTTTTAGATGTTTGTGTATCTTAGTCTCTCTTATTTAACTTTTTTCGGCAGC CCCCTAAACTTGGAAAGGTCTAG
CDS sequence (LotjaGi1g1v0769800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGATGACAATGGAGGGAATGATGGATAAGGGGGTTCTGGATGATGTGATAAGGAGGTTGCTGGAAGGGAAAGG AGGAAAACAGGTGCAGCTCTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCGAGACAAATCTTCCTCTCTCAGCCCA ATCTCCTTGAGCTCCGTGCTCCCATTCGAATCTGCGGTGATATACATGGTCAGTACCAAGACTTGCTGAGGCTTTTTGAA TATGGTGGCTACCCTCCTTCTGCAAACTACTTGTTTCTGGGGGATTATGTGGACAGAGGGAAGCAAAGTTTAGAGACTAT ATGTTTGCTTTTGGCCTACAAAATAAGATATCCGGACAAAATTTATCTCTTGAGAGGAAACCATGAGGATGCGAAGATAA ACCGGATATATGGCTTCTATGATGAATGCAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACAGACTGCTTTAAC TGTTTGCCGGTGGCTGCGCTCATTGACGAAAAGATAATTTGTATGCATGGAGGACTCTCTCCAGAGTTGCAAAATTTAGA TCAGATAAGGGAGGTCACAAGGCCCACCGAAATTCCGGATAATGGTCTCCTTTGTGATCTTCTTTGGTCTGATCCTGATA ATAGCATTGAGGGCTGGGCAGACAGTGACCGGGGCGTTTCAATGACTTTTGGACCTGATGTTGTCGCGGATTTTCTGGAA AAGAATGATCTTGATCTTGTTTGCAGAGGTCATCAGGTTGTGGAGGATGGTTATGAGTTTTTTGCGAAACGAAGATTAGT CACGATATTTTCTGCTCCAAATTATGGTGGGGAATTTGACAATGCTGGTGCATTGTTGAGCGTGGATGAATCCCTTGTAT GTTCCTTCGAGATATTGAAACCCCTTGACAGAGGATCAGGAAGTGGTTCAAAAATGACTCTTAAGAAGCCCCCTAAACTT GGAAAGGTCTAG
Protein sequence (LotjaGi1g1v0769800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMMTMEGMMDKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPNLLELRAPIRICGDIHGQYQDLLRLFE YGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFN CLPVAALIDEKIICMHGGLSPELQNLDQIREVTRPTEIPDNGLLCDLLWSDPDNSIEGWADSDRGVSMTFGPDVVADFLE KNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPLDRGSGSGSKMTLKKPPKL GKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 304 | 300 | 1.4E-131 | ||
| PANTHER | 7 | 322 | 316 | 3.0E-200 | – | |
| PANTHER | 7 | 322 | 316 | 3.0E-200 | – | |
| CDD | 14 | 301 | 288 | 0.0 | – | |
| Pfam | 15 | 58 | 44 | 8.2E-20 | ||
| SUPERFAMILY | 16 | 303 | 288 | 2.19E-117 | – | |
| SMART | 33 | 303 | 271 | 6.2E-165 | ||
| PRINTS | 61 | 88 | 28 | 5.4E-93 | ||
| Pfam | 62 | 253 | 192 | 4.7E-41 | ||
| PRINTS | 90 | 117 | 28 | 5.4E-93 | ||
| PRINTS | 123 | 147 | 25 | 5.4E-93 | ||
| ProSitePatterns | 124 | 129 | 6 | - | ||
| PRINTS | 157 | 183 | 27 | 5.4E-93 | ||
| PRINTS | 186 | 213 | 28 | 5.4E-93 | ||
| PRINTS | 243 | 263 | 21 | 5.4E-93 | ||
| PRINTS | 265 | 281 | 17 | 5.4E-93 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0769800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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