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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0013800 |
Transcript ID | LotjaGi2g1v0013800.6 |
Related isoforms 7 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Zinc finger protein, putative; TAIR: AT2G02080.1 indeterminate(ID)-domain 4; Swiss-Prot: sp|Q8GYC1|IDD4_ARATH Protein indeterminate-domain 4, chloroplastic; TrEMBL-Plants: tr|A0A1J7HHK3|A0A1J7HHK3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0013800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:5010873..5021546) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTATGCATAAGAAAACAATAGCTATAGCTTGAGAGAAGATGAGTAGGTCTACAGAGTGATTGTTTTCTTCTCTTTTA TCTCAGGATTGTTGGTGTCTCCTAATTAGATAAACTCTCCTTGGTGTTTTCTAGATTTAATCAGAAAAGCTTTCAAAGGG ACAAGAAAAAGCAGGTAAAATGAAACATATATAGATTTCAGGTCTTTTTATTTCCTTCTTTTTTCTTATGCCTTTTTGTT TCCCTTTTTTATTTTATGGTGTCCAAGAGACAAGAAAGCATGGAATTTAGTTTTTCTATTTGCTAAGGAATTTGATAACA TTCTATATAACAGGTTTCAAATTTAAGAAATCCCAGGGTTGCATCTCAAGTTTGCAAAACAACAACATGGCTGCTTCTTC CTCACCATTCTTGGAAATCAGACAAGAAAATCAAAGTCAGAATACACAACAACACCAGTCCTCTTCATCAACTGCTGCTC CACCTGTAGTTCCTCAGAAGAAGAGGAGGAATCATCAACCTGGAACACCATGCAAGTAGCTCTATGCATTCTTCATTATT TGATTACTTAAAAGCATTTATATGTACTTGAAAAATACCCCTCTTGAAATTGTTTGCTGGATTTCTTCTCCAGAAACATA CTTGACAAGAAAACCCTATTATTGCTGGATTTCCTCTATGTTTATCTACTGTACTAATAAATTTTTTGTCATTGTTTTTT TTTTTAAATCCTTAATATTTATTAACTCCTCAATGCTCATTGAAGCATAGAATTGTCCAAAATTTTGCTTTAATTAGTGA CATATTTTTATTTTTCTTTCAATGGTGACAACAGATCCAGATTCTGAGGTGATAGCACTATCTCCCAAGACACTAATGGC AACAAACAGGTTCATATGTGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAAAATTTACAGCTCCACAGAAGAGGACACA ACTTGCCTTGGAAACTAAAGCAGAAGAATACAAAAGAGCAGGCAAAGAGAAAGGTTTATCTCTGTCCTGAACCCACTTGT GTCCACCATGACCCTTCACGGGCTCTTGGAGACCTCACTGGGATCAAGAAGCACTTCTCTCGGAAGCACGGTGAGAAGAA GTGGAAGTGTGAAAAGTGCTCTAAGAAGTATGCTGTTCAATCAGATTGGAAAGCACATTCTAAGACTTGTGGTACAAGAG AGTATAGATGTGACTGTGGCACTCTCTTCTCCAGGTACCAAAATCTATGTCCAACTTAGTTGAGTTTAGTTTTGTTGAAT GTTTGGTGTACTTACATGAGTACGTTTTAAGAAAAATTATTTGAGCTTATCTTAAGAATGCTTAATAGCTTATGACATAA TTATAAGCTGATTTGATCAGCTTATTTTGATAAACTATTTAACTTAAAAATAAGACCTTATACCTACAAATACGATATTT TGGGTTTATTTCATTAAATTTTTTAAATGAACTTATGAATAACTTTTTATAAAATAAGTTTTAACTTTCATATACACTTA ATTATGGTTTTTACTCAAACACACCATAAGAATAAGGCACCGGCAGCTACAGCAAATTTAAAAGTTAAAATGCATTGTAA TAATAATGAAAAGGCATTGAGTGCCTGTTTGAAAAACCTACGCCAAAATCAATTACTGGGAAAATCTTCTTTAAATAGTT CTCGTGTGTCATAATTGATTATAAAAAAAGATAAATGAACCAACATTCTATGAAGATTTCATTGAAGTTATTTTAAACAT TTAGTTAGTTGAACTAATTAACTATTGTAAGAACTTCTCTGGTGTAACTTAATTATTTATCATATAAAAGTTTCTGAACT AAAAGCACTCGATAGACAGCATTTTGTACCCTTCACCTAACTTAACTAGTGTGAACTAAGACTAGTAGATAGTTGAGTAA GTTTTAAAATGAAAAGAAAAGAATGTTAGCATGGATGGTAGCTGAAGAAAATGCTTCTAACAAAAGATAAACTGGAGCCA AAGCCGTTCTACCTTTTTCTTTTCTTTTGTTCGTTTATGTTTGGGTGTTACTGTGAGACTGTTCTCGCACGTGAGTGAAC ACACTAACAAATTGAAATGTTTTGAGAAGAAAAAAACAAGCAACTTCAACTTTGTTCTCGGGAACAACGTTCTCTATCGT TATTCCCATTCACGTGTAGTTTTAGCAACAATGTAATGGCCACAGTGATTTTTTATTTCTGGGGTTGTTGTCACATGATG ATAAGTTGGTCATATATTTATACGTGGTTCAAATCAAATATGGTACATTCTTGTTCATTAATGTCAGTGGCTCTCTTTCT TATATTTGTTCATTAATTTGGATATCTATAGTTCTTGTTTTCCCACAAGATTTGCCGAGAATTTAGTAACCCTTTGGTTG TACGATCGTTTTCACTAGAATTCACATGGTTCAAAATGGACATGCCTTGCATTTATTGAGGCTGGTCCCATGTTGCGGTA TTGATTTTAACTTTCATCAATTTTGTCAATAATTCTTTCGTTTTGGGTGATCAAATAAAGCCCTCAAAGTGGTAGTTAGA TAGGGAGTTGTTGGTGTGTTTCGGATTTTGGTATCATAATTTTTGTTTTGGATAGAGGTTTAATTCTAGTTTTCATTTAA GTAGAGGTGGATTTTATTTTTCTATTCTGAAATACCGAAATAGTATATCGAATTTCAACGAAAATATATCTCAAAATTAT TGAATGTTTTATCTTGACTTTTTAAATTAGGATAAAACTTATCTACTATTTTTTGGGTGTTGTTTGTGTGTGGTTGAATA ATAAAAAATTCAGTTATTCACTAATTTATTTGTCATTATTTCCTGAAAACTTATTTTAATCGTGTATCATACTCTAATTG GTTAATAGTAAAAATTGCACATATAAAATATAAAATTGTAACTAAGTGTAAATTGTGTGACTAGAATTGTACCTAATGCT TTCTATAACATCTTATGCAAATTAATTAATTTGCTAGTAAAATTATTGTTCATGATTTGAAAGTACAGAGGGCTATATAT GAGGGTGCGATTTAATTCAGACAAATTCCAACACTCTTATTTATAAAGTATAAACTATTATTATCATTTCATATTATCTA ACGTGGGACTATATATCAGTTTAAACACATACAATAGTTAAGCTCATATCTTATACTTGGATGAATTATGTGACTAGAAT TGTATTGATAATCCTATCTATACTACCATACTTATCCAAATTAATTAATTCTCTTTGTTGCAGGCGTGACAGTTTTATTA CTCATAGAGCCTTTTGTGATGCGTTAGCACATGAGAGTGCAAGGCACCCTTCCAACCTGAACCCTCTGGGAACTCATCTC TATGGCACCAACCACATGAGCTTATTCAAGAAGGGGTCTATATGGTGGAGGGATTTGGGGAAGGTTAGTGAGGGGGGAGG TAATGGGGGATGGTTTGTGAGTGGGGTAAGAAGGAAGATTGGGATGGGTCATGACATAAAATTCTGGAAAGAGTGAAGTA AACACTAATTTCATTCCCCAAGCTTATCAAAATCTTTCATAAAAATAAGGGTTTACTCTTTATTCAAGTGAATAATATGT TTGTTTGATTAGAGAGGAAGAGATTGATTGATTACCTTTTGAATGAGATGGGTAGAACCCTTGCCAACTTGGATCGGAAC GGTGTCGTTTAAGACCACACAAGTTTCTCTCTGGCTCAGTTCTCCACACGTTCCACATTTCACCTAAAGAATTCGCAACA GAAAATCAAAACAACACCACCAGATGCAAAAACGAAAGAGAGATTGGAAGGGTTGAAGAGAAGAGAAAGAGAACCTTTCT TCCTGTGCGGCTCGCTCCGTCTCAGAATTCTCCGCACTAAATTCGCTGGTGGGAGAGAGGGATAGGTCGATGAAGAGTGG GAGGGAAGGACAGGGAAACGAGAGAGGGACGGGAACAGATCGGAGCTTCGTCGGCAGGTCGATGGTTTGCGAAGAGTAGG ATAGAGCGTGGGAGGGAGAGGGATTGCACAGCTTTAGGGTTTTCTTCTAAACAAAATTGGAGAAAATTTCTATTGTCACG GTCCCTCAAAAAAAAATAATAAAATATTATCTCATATTACCACGGTTCCGCTTATAACAGTGGCAATTGAGCTTTTGCTA CGGTTCCGCCTATAACCGTGACAATTGAGGCGTGGCAAAATGTCATTTCTGTAGTAGTGAGTTAGAAGGAAGTGTGTACG TGAAATATTATAATAGGGTGTATCAAACTTGAAATGAATCATTCATGATATAATATAAATATACTAAGATCTAGGGTTTT GGTCTTTAAAAGCTTCCTTGTGTTGCTTACCAACTTTTGTTGGTTAGGTTATTATACTCAAGTTGAAAGTTGAAAGGGGT TGTTTCTCAACAAGTTATATTTATATATATCTACTATTCCCCTTAAAAAAATAAATATACTAAGATATATATGATAGAGA ACGTATATCTAAAAGAATAACAAATCCTTTATGCAATTACGAGATATCACTTTAATTTAAAATATTTATCCTCACTTGCG CAAGACGTTGTTGTTAATATTGAACAAAAGTGCATTGGACCCATCATTTTATTTCGTAAAAAAAAAAATATAACTGGCAA TTCATGGTGGGCAGGGAAATGAGGATATAGAGCAACTTGTGTGTGCATGTTGGCAATAAGATATGAAACAAGAGAAGGAG AGATAAGGAGACTGTAAGGCCTACGGGGTCGGTGGCCCCGAACTATCACCCTGCTAAGGACACAGTAGCCTGTGCTGTGC AAGAGCTGCACAATAGTGACACAAATTACCTTCTATTAATTTGTTACTTCACCACACCAAATTATTTTCCATTACAAATT ACACAACAAGGATGAGGGAATAAATGCATACAAGTAAAGGAAGTAGCTAAGAGAAACAGACAAAAAAGGGAGAGAAAGGG ATATGGGTATGCGTATGGGTGGACAAGTATGCCTAGTATTATTTATGTATAGAAGACATCAAATGATTGAGGAATAAAAG AAGAGGGTGAAGCAAAGTTTTATGCATAAGAAAACAATAGCTATAGCTTGAGAGAAGATGAGTAGGTCTACAGAGTGATT GTTTTCTTCTCTTTTATCTCAGGATTGTTGGTGTCTCCTAATTAGATAAACTCTCCTTGGTGTTTTCTAGATTTAATCAG AAAAGCTTTCAAAGGGACAAGAAAAAGCAGGTAAAATGAAACATATATAGATTTCAGGTCTTTTTATTTCCTTCTTTTTT CTTATGCCTTTTTGTTTCCCTTTTTTATTTTATGGTGTCCAAGAGACAAGAAAGCATGGAATTTAGTTTTTCTATTTGCT AAGGAATTTGATAACATTCTATATAACAGGTTTCAAATTTAAGAAATCCCAGGGTTGCATCTCAAGTTTGCAAAACAACA ACATGGCTGCTTCTTCCTCACCATTCTTGGAAATCAGACAAGAAAATCAAAGTCAGAATACACAACAACACCAGTCCTCT TCATCAACTGCTGCTCCACCTGTAGTTCCTCAGAAGAAGAGGAGGAATCATCAACCTGGAACACCATGCAAGTAGCTCTA TGCATTCTTCATTATTTGATTACTTAAAAGCATTTATATGTACTTGAAAAATACCCCTCTTGAAATTGTTTGCTGGATTT CTTCTCCAGAAACATACTTGACAAGAAAACCCTATTATTGCTGGATTTCCTCTATGTTTATCTACTGTACTAATAAATTT TTTGTCATTGTTTTTTTTTTTAAATCCTTAATATTTATTAACTCCTCAATGCTCATTGAAGCATAGAATTGTCCAAAATT TTGCTTTAATTAGTGACATATTTTTATTTTTCTTTCAATGGTGACAACAGATCCAGATTCTGAGGTGATAGCACTATCTC CCAAGACACTAATGGCAACAAACAGGTTCATATGTGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAAAATTTACAGCTC CACAGAAGAGGACACAACTTGCCTTGGAAACTAAAGCAGAAGAATACAAAAGAGCAGGCAAAGAGAAAGGTTTATCTCTG TCCTGAACCCACTTGTGTCCACCATGACCCTTCACGGGCTCTTGGAGACCTCACTGGGATCAAGAAGCACTTCTCTCGGA AGCACGGTGAGAAGAAGTGGAAGTGTGAAAAGTGCTCTAAGAAGTATGCTGTTCAATCAGATTGGAAAGCACATTCTAAG ACTTGTGGTACAAGAGAGTATAGATGTGACTGTGGCACTCTCTTCTCCAGGTACCAAAATCTATGTCCAACTTAGTTGAG TTTAGTTTTGTTGAATGTTTGGTGTACTTACATGAGTACGTTTTAAGAAAAATTATTTGAGCTTATCTTAAGAATGCTTA ATAGCTTATGACATAATTATAAGCTGATTTGATCAGCTTATTTTGATAAACTATTTAACTTAAAAATAAGACCTTATACC TACAAATACGATATTTTGGGTTTATTTCATTAAATTTTTTAAATGAACTTATGAATAACTTTTTATAAAATAAGTTTTAA CTTTCATATACACTTAATTATGGTTTTTACTCAAACACACCATAAGAATAAGGCACCGGCAGCTACAGCAAATTTAAAAG TTAAAATGCATTGTAATAATAATGAAAAGGCATTGAGTGCCTGTTTGAAAAACCTACGCCAAAATCAATTACTGGGAAAA TCTTCTTTAAATAGTTCTCGTGTGTCATAATTGATTATAAAAAAAGATAAATGAACCAACATTCTATGAAGATTTCATTG AAGTTATTTTAAACATTTAGTTAGTTGAACTAATTAACTATTGTAAGAACTTCTCTGGTGTAACTTAATTATTTATCATA TAAAAGTTTCTGAACTAAAAGCACTCGATAGACAGCATTTTGTACCCTTCACCTAACTTAACTAGTGTGAACTAAGACTA GTAGATAGTTGAGTAAGTTTTAAAATGAAAAGAAAAGAATGTTAGCATGGATGGTAGCTGAAGAAAATGCTTCTAACAAA AGATAAACTGGAGCCAAAGCCGTTCTACCTTTTTCTTTTCTTTTGTTCGTTTATGTTTGGGTGTTACTGTGAGACTGTTC TCGCACGTGAGTGAACACACTAACAAATTGAAATGTTTTGAGAAGAAAAAAACAAGCAACTTCAACTTTGTTCTCGGGAA CAACGTTCTCTATCGTTATTCCCATTCACGTGTAGTTTTAGCAACAATGTAATGGCCACAGTGATTTTTTATTTCTGGGG TTGTTGTCACATGATGATAAGTTGGTCATATATTTATACGTGGTTCAAATCAAATATGGTACATTCTTGTTCATTAATGT CAGTGGCTCTCTTTCTTATATTTGTTCATTAATTTGGATATCTATAGTTCTTGTTTTCCCACAAGATTTGCCGAGAATTT AGTAACCCTTTGGTTGTACGATCGTTTTCACTAGAATTCACATGGTTCAAAATGGACATGCCTTGCATTTATTGAGGCTG GTCCCATGTTGCGGTATTGATTTTAACTTTCATCAATTTTGTCAATAATTCTTTCGTTTTGGGTGATCAAATAAAGCCCT CAAAGTGGTAGTTAGATAGGGAGTTGTTGGTGTGTTTCGGATTTTGGTATCATAATTTTTGTTTTGGATAGAGGTTTAAT TCTAGTTTTCATTTAAGTAGAGGTGGATTTTATTTTTCTATTCTGAAATACCGAAATAGTATATCGAATTTCAACGAAAA TATATCTCAAAATTATTGAATGTTTTATCTTGACTTTTTAAATTAGGATAAAACTTATCTACTATTTTTTGGGTGTTGTT TGTGTGTGGTTGAATAATAAAAAATTCAGTTATTCACTAATTTATTTGTCATTATTTCCTGAAAACTTATTTTAATCGTG TATCATACTCTAATTGGTTAATAGTAAAAATTGCACATATAAAATATAAAATTGTAACTAAGTGTAAATTGTGTGACTAG AATTGTACCTAATGCTTTCTATAACATCTTATGCAAATTAATTAATTTGCTAGTAAAATTATTGTTCATGATTTGAAAGT ACAGAGGGCTATATATGAGGGTGCGATTTAATTCAGACAAATTCCAACACTCTTATTTATAAAGTATAAACTATTATTAT CATTTCATATTATCTAACGTGGGACTATATATCAGTTTAAACACATACAATAGTTAAGCTCATATCTTATACTTGGATGA ATTATGTGACTAGAATTGTATTGATAATCCTATCTATACTACCATACTTATCCAAATTAATTAATTCTCTTTGTTGCAGG CGTGACAGTTTTATTACTCATAGAGCCTTTTGTGATGCGTTAGCACATGAGAGTGCAAGGCACCCTTCCAACCTGAACCC TCTGGGAACTCATCTCTATGGCACCAACCACATGAGCTTAGGCCTATCCCAAGTGGGTACCCAACTTCAGAACCAAAACA GTATCTTAACCCTAGGCAATGCTGCTGCAGGTGCACCAAAATTTGAGCACTTGATCTCACCTTTCCAACAGTCATCATTT GCGCACTCATCATCACCACAGTCATTGTCTTCCTCATCACCTTTCTTCATGGCTGACCCAAATCAAGGGATTCAAGACCT TCAATCTCATCATCACCAAGGACAATTCTCGAACAAGCAGCTGCATGGTCTTATGCAGCTCCCTGATTTTCAAGGTCCCA CCACCAACAACACCAGTACTTCTGCACCATCATCAGTTTCTGCTAATTCAGCTGCAAACTTTTTCAACCTCAGCTTCTTC CCAAATAGTAATAGCAACGACAGCACCATCCCTGATCAGTTCAACAGTATAACTGCAGGTAACTGAAGAACTGTAAAAAA AAAAGAAAAGATGAAGATTATAGAAAATGAGAAAATTAAATGTTATTATATATATTTGCTAGATTGCTACATGATGAGTT GGTCTATTATTTATATTTCTGCAGTAACAAGTACATTTCTAATCAATTTAAGTAATAATTAAGGGTGTTTTTCCGAGTTA TATTTTGGAGGAGAGAGTAGGGGAGGCCAGGAGAGGGAAGGGAAGGGAAGGGAAAGACTTTCAAGAAGTCCTCCCATTGT TTGTGACTTTTTAAGAAGGGAGGAAGGCTTTAGGGTATTCAAAGAAACCCTCTAACACCACCCAAACCCTCTCTTAGTTA TATTTTTAGTTCACCAAAATGAGGGATTTTGGAGTAGCAAATTCAAGAGCAGAGCTTACCCCCTCTTGCTCTCTCCTTCT CGGTCTTCAAAGTCATCCCTGCTCCTCCTCTATGTTTGTGAGTTTTTAGGGGAGGACAAGGGATACTTCGAAGGGAAGAC AAATTGAGAAGGAAATGGGTAAGTCTTTCCCTTGTTTACAAGTTCAGAATTGCACTAAACCCCTCAGTTTGGAGTGACAC TATAAAACAACTAAATCTTGTGGGTTTTGAAGGGTTTTAAAAAATTCTCCAAACCTTTCCCCCATCTTAAAAGCTCAAAA ATAAGGGGAGGACTTCTTGAAAGTCTTTCCCTTCCCTCAGCTCTCCTCCCGTTCAAAACTCAAATCGCAAACACACTCGA ACTTTGTTATTACCACTAACTTTTAGTACATATTATTTGCAGCACAGTCTTTATATATTAACACTAATTTGTAGAAAATT TCTTTTATCTTTTGAACTTGTTTTTCTTGATTCACGGTAAGACAGTACTAAAACTTTATTTTAAACAGGAACAACACTCT ACACAAATAGCCCTGGCAGTAGCAATCATCACCAAGTTGGTTCAGCTTTGTCTTCAATCTTTGGCAATTCATCACTGCAA CAAGAGAACAACATGCCCCCGCACATGTCTGCAACTGCATTGCTTCAGAAAGCTTCACAAATGGGCTTATCCACAACAAC CATTAATAATGGTTCCTCTCTACTAAGACGAATGGAGAGCTCCTCCACCAATGGTTCAGAATCTGAACTCAACAATTTTG CTGCCACTTTTGGAAGTGATCATAGTAAGGGAGAAGGTATAAGATCAAGCATGGAAAATGACCACCAACATCATCTACAT GGGATAATGAACTCTCTTGCGAACCGAAACAACAATTCGATGTTTGGCCATGTGAAAGGGAATGAAAACAATAATGTTTC TCATTTTCACATCATGGAGGAGGCTAAAAGATTGTCATCACAAAATCTGGGTGGTGTGTGCTTTGGAGGATCTGATAAGT TGACTTTGGACTTTCTTGGTGTTAATGGAGGAATTGTGAGGAACATGAGCGGTGGGTTTTCACAAAGAGAGCAACTAGAC TCCATTTTGGATCCTAAACTTGAATCAACACAAGCAAATCAACAATTTGGAAGCTCATCATTGCAATAATAATTACCTAT GTTTGTTTATACATTCAACAACATGGCCACACATTCCAAATCATATATCAAAATATATATATGAAGGGAAGAAATTGTTC TTATTCCTTTTGATTGTGGCTAGACGTTAAATCAAACATACACTTAGCTGGGTAAATTTATCAAGTAGAGATAAACGTTT TTTACCTCTATGTGTTAGTTCTAAACTATAGTTTTCCTTTTCTTTTACAAATTTCCAATTGATATATAGGATATCAATTC TAAAATGGCGAGTTCAATTCTATAGTGGATATTG
CDS sequence (LotjaGi2g1v0013800.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCTTCTTCCTCACCATTCTTGGAAATCAGACAAGAAAATCAAAGTCAGAATACACAACAACACCAGTCCTCTTC ATCAACTGCTGCTCCACCTGTAGTTCCTCAGAAGAAGAGGAGGAATCATCAACCTGGAACACCATATCCAGATTCTGAGG TGATAGCACTATCTCCCAAGACACTAATGGCAACAAACAGGTTCATATGTGAGGTATGCAACAAAGGGTTCCAAAGGGAG CAAAATTTACAGCTCCACAGAAGAGGACACAACTTGCCTTGGAAACTAAAGCAGAAGAATACAAAAGAGCAGGCAAAGAG AAAGGTTTATCTCTGTCCTGAACCCACTTGTGTCCACCATGACCCTTCACGGGCTCTTGGAGACCTCACTGGGATCAAGA AGCACTTCTCTCGGAAGCACGGTGAGAAGAAGTGGAAGTGTGAAAAGTGCTCTAAGAAGTATGCTGTTCAATCAGATTGG AAAGCACATTCTAAGACTTGTGGTACAAGAGAGTATAGATGTGACTGTGGCACTCTCTTCTCCAGGCGTGACAGTTTTAT TACTCATAGAGCCTTTTGTGATGCGTTAGCACATGAGAGTGCAAGGCACCCTTCCAACCTGAACCCTCTGGGAACTCATC TCTATGGCACCAACCACATGAGCTTAGGCCTATCCCAAGTGGGTACCCAACTTCAGAACCAAAACAGTATCTTAACCCTA GGCAATGCTGCTGCAGGTGCACCAAAATTTGAGCACTTGATCTCACCTTTCCAACAGTCATCATTTGCGCACTCATCATC ACCACAGTCATTGTCTTCCTCATCACCTTTCTTCATGGCTGACCCAAATCAAGGGATTCAAGACCTTCAATCTCATCATC ACCAAGGACAATTCTCGAACAAGCAGCTGCATGGTCTTATGCAGCTCCCTGATTTTCAAGGTCCCACCACCAACAACACC AGTACTTCTGCACCATCATCAGTTTCTGCTAATTCAGCTGCAAACTTTTTCAACCTCAGCTTCTTCCCAAATAGTAATAG CAACGACAGCACCATCCCTGATCAGTTCAACAGTATAACTGCAGGAACAACACTCTACACAAATAGCCCTGGCAGTAGCA ATCATCACCAAGTTGGTTCAGCTTTGTCTTCAATCTTTGGCAATTCATCACTGCAACAAGAGAACAACATGCCCCCGCAC ATGTCTGCAACTGCATTGCTTCAGAAAGCTTCACAAATGGGCTTATCCACAACAACCATTAATAATGGTTCCTCTCTACT AAGACGAATGGAGAGCTCCTCCACCAATGGTTCAGAATCTGAACTCAACAATTTTGCTGCCACTTTTGGAAGTGATCATA GTAAGGGAGAAGGTATAAGATCAAGCATGGAAAATGACCACCAACATCATCTACATGGGATAATGAACTCTCTTGCGAAC CGAAACAACAATTCGATGTTTGGCCATGTGAAAGGGAATGAAAACAATAATGTTTCTCATTTTCACATCATGGAGGAGGC TAAAAGATTGTCATCACAAAATCTGGGTGGTGTGTGCTTTGGAGGATCTGATAAGTTGACTTTGGACTTTCTTGGTGTTA ATGGAGGAATTGTGAGGAACATGAGCGGTGGGTTTTCACAAAGAGAGCAACTAGACTCCATTTTGGATCCTAAACTTGAA TCAACACAAGCAAATCAACAATTTGGAAGCTCATCATTGCAATAA
Protein sequence (LotjaGi2g1v0013800.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASSSPFLEIRQENQSQNTQQHQSSSSTAAPPVVPQKKRRNHQPGTPYPDSEVIALSPKTLMATNRFICEVCNKGFQRE QNLQLHRRGHNLPWKLKQKNTKEQAKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDW KAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARHPSNLNPLGTHLYGTNHMSLGLSQVGTQLQNQNSILTL GNAAAGAPKFEHLISPFQQSSFAHSSSPQSLSSSSPFFMADPNQGIQDLQSHHHQGQFSNKQLHGLMQLPDFQGPTTNNT STSAPSSVSANSAANFFNLSFFPNSNSNDSTIPDQFNSITAGTTLYTNSPGSSNHHQVGSALSSIFGNSSLQQENNMPPH MSATALLQKASQMGLSTTTINNGSSLLRRMESSSTNGSESELNNFAATFGSDHSKGEGIRSSMENDHQHHLHGIMNSLAN RNNNSMFGHVKGNENNNVSHFHIMEEAKRLSSQNLGGVCFGGSDKLTLDFLGVNGGIVRNMSGGFSQREQLDSILDPKLE STQANQQFGSSSLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 553 | 553 | 1.4E-204 | – | |
MobiDBLite | 1 | 33 | 33 | - | – | |
PANTHER | 1 | 553 | 553 | 1.4E-204 | – | |
MobiDBLite | 1 | 53 | 53 | - | – | |
Gene3D | 51 | 117 | 67 | 1.5E-5 | – | |
SUPERFAMILY | 67 | 165 | 99 | 1.96E-7 | ||
SMART | 68 | 90 | 23 | 0.0052 | ||
Pfam | 68 | 90 | 23 | 3.0E-5 | ||
ProSiteProfiles | 68 | 90 | 23 | 10.99 | ||
ProSitePatterns | 70 | 90 | 21 | - | ||
SMART | 110 | 140 | 31 | 160.0 | ||
Gene3D | 123 | 202 | 80 | 3.6E-6 | – | |
SMART | 145 | 165 | 21 | 140.0 | ||
MobiDBLite | 264 | 284 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi2g1v0013800.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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