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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0021800 |
| Transcript ID | LotjaGi2g1v0021800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | G-patch domain-containing protein; TAIR: AT1G33520.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9C801|MOS2_ARATH Protein MOS2; TrEMBL-Plants: tr|K7L2Q5|K7L2Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0021800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:7707378..7713898) extracted from Lotus japonicus Gifu genome v1.2.
GATTTTGTGAAATTACCTAATAATTAATTAAAGATTAAGAAAATATATTTTTGATTTTTTTTAAAAAAACTTGCTATTGT GGGTCAAAAGAAGGTGATGCAACTTTGCACCACCCAAAAGTGGTCCATAATAAATTTTTCCCAGATGGGGGACCCAACAC ACTAGTTGAAAACCAAGACGCTCTGCTCTTTCTTTCCCTTGTAGTCCCTCTCTAACCATGAAACTCTCATTCTCCCTCCC TTCCTCCAAATCCTCCAAGCACACCAACAAGCCCGATCACGGCGGCGACGACGACGGCGCCGGCGCCACCAAACATTTAA TCACCGAATTCGACCCTTCCAAACCCCCACCTCTTTCCCAACCCAAAACCCTAATTCCCCCAATCCAAAACCAATGGCGT CCCCTCAAGAAACCCAAGATGAACAACCTCCTCCTCCCCCTCACCGAACCCCAGCACCAACACTCCCTCGCCTTCGAACC TGACACCGCCGCCGCCGCGGAACCCGATTCCGACATCTCCTACGGCCTCAACCTCCGCCGCGACGCCAAGCAGACCGAAG ACAACGCCCATGATGATGATGCCGCTGCTCCGCGGCGCCGTTTTCAGCCTGAAGCGATGATGCTGCAGAAGCTTAAGGAT GATCTGGAGAAGCTGCCGGATGACCAGGGGTTTGACGAGTTCAAGGATATCCCTGTCGAGGGCTTCGGCGCCGCGCTGCT CGCTGGTTACGGCTGGTCGGAAGGGATGGGGATTGGGAAGAACCCTAAGGAGGATGTTAAGGTGGTGGAGTACAAACGAC GGGCTGGAAAGGAAGGATTGGGATTCGTCGGTGATGCACCGGTTTCCCGTCACCAGAAGAAGGAGGGTGGAGCAGCAGAG AATGGCAAGGAAAAGAAAGAGAAGGAGAAGGAGAAGGTTGTGAGAATTGTTGGGGGAAGAGATGCGGGGTTGAAGGGCAG TGTCGTGTCGAGAATTGGGGATGATTTTCTTGTGCTGAAACTCGTAGAGAGCGGGGAGCAAGTGAAGGTCAAGATGGGTG ATGTTGCTGAATTGGGTTCTGTGGAAGAAGAGAGGTGCTTGAGAAAATTGAAGGACTTGAAGATTCGGCGTCGCAATGAG GACAAAGGGGCTAAGAGTAAACGTGGAAGGGATGGAGTTGAGGATATGAGAGGGGATCGCGGCAGGGAAGAGCAGGGGAA GAAGCAGGCTTCTTGGCTTACAAGTCATATTCGGGTTAGGGTTGTCAGCCGAGATTTAAAAGGGGGGAGGTTGTATTTAA AGAAAGGAGAGATTTTGGATGTAGTTGGGCCTGCTACTTGTGATCTATCTTTGGATGACAGCAGGGAGATCATTCAAGGA GTGTCTCAAGATCTTCTCGAGACAGTTATCCCGCGACGTGGGGGACCAGTTCTAGTGTTGTCTGGTAAACACAAGGGAGC CTTTGGGAGTCTGGTTGAGAAGGATTTGGACAGAGAAATTGCCATTGTTAGGGATGCTGACACCCATGAGCTGCTCAAAG TCAAACTTGAACAAGTTGCAGAATATATGGGGGACCCAAGCTTATTGGGACATTGATTCTGTTGAAGCAACAGATTTACA AGTATGCATCTTGTGAATCCTTAATGCTTTTTCCTATTCTTTTATCACCCCTAGATAATATAATAATGGCACTGTATGTG TTGCTTGAGAAGTTTGCAGTTTGTTGATGTTTAACATGATATTCTATCCAAATTCCAATTGAAGCTTTAAGTTTTAGGGT GGATTTCAGACATTGATTGAACTGTACTACGTGAATGAATAATAGATACCTTTGTAGCAATAGTCTATTTCATTGTTTAG TTACATAGCAACAACCTATGCAAAAAGGGGGTCATGTCTTCTTTTATATTCTTTATCATGTGATTAACCCTGTTTAATTT GGATTAATTTCATCTCAACCTATTTAGGCTGCAGCAGAGCTATGATTTGTGTTATTGCGCTTATTGTATATTTTAATTGA ACAGTGAGAACCTAAGCTGGAAAGTTCTGTTCTGTATGATTCTTGTGGATGAAATACCCTTCAGAATTCAGAACCTTCAA CTCAGATAAATAAGACATGATTGATAACTTGCATGCACGTGTTATAATTGTCTAGACTAGAGAGACTGAATCATTTAAAA ATTTGTGTAGTTCAGTAGGCCTTATCTGTTAAGTAGGTATTTGTAAGCATTTTAATTCCCTCTTTTTTTTTTTTTGTAAA TCTGGCATGCAATTATTTTTTATTCATCTTTAAGCTGTGTGTACTTGACTACTTGTTCAGTTCAGGCTTTACTTAGTATA TGGCCAACTTGCACCTTCTGGCCTTTTAATGTTTTGGTTACAAATAATGAATGAAACCATCACGGAGTAGAGAAGGAAAA TGGTTTGGGATGGACTTACGGTGATGCTTTTCAGTCGCTTCACACTTTAAACTCTAATTTACCTTTCTAAATCTTGTGGT ATTTCTTTTTGTGCTGGTGAATCCCTGGGGGAGGTTGGTTTTTGGAAAATGGAAAGTGAGGTTTTGTCTTACCTCTTTTT TGGCTGGGGTAATATTTTTTAAATCATTTCCTGTTGATAATGTAGTGACAATGAAAATTCAGCCGCCCAGACCAGAATAT CTCTTCCTTCAATAGATCCAATTCCCTTTGCTGAATTTTAGTTATTTGTGGCTGTGCCATCATATTTAGATAAAGCTTTC TTTCAAAACTAACATTTAGATGAATAGTATAGTATTTGTGTATGTCTATGTGCCTATGGTTGTACTTTGATTAATTGGTC TTGTTTTGCTTTTACTCTTTGTGCTTTGAGTTTGAATTTTCTTCAATATTCTTTTCCAGTGTTAGATTACATTTTACTGT TAATAGTGTCAATATGGTCCAATTCCATGACATTATGATTTGCTTTCTGCAATATCTGATATAGCAATCAGTGACTCAAC CAGTCATATAATAGAAGTGTAAATAATTACTGAAGCATGTAGTAGTAATTATGAATCCTCAACTGGAATGGACCCTGCTG TAAGTTATCTTTGCCCGATTATAGGAAATATTCTGTGTAATCTCTTACAATCTTGCACTCAAGATCTGTACTTGAATTGC CATGATTCATGTTTATCTAGATTTTGGGCTTTTCACTAGGCTTTTCTTTGTCCAATTTGCCATTTTTTTATGTCAAAAGC ATAATATGTTGGATCATTCTCTCCAATTCTGATGCATTTAACTTCCAATTTTCTTACTTCTTAGTCATTATTTCTAGTTA CTTAATATGCTCGAGTACAATATCTTGTACTATACCATCTTGGGTGATTGTTTAAGGGCCTTTTCAAGTTGCCAAAAGGA AAGTAGCTTGTGAGATTACGGTTGGAAGTCCTACATTGGCTAGAGATACAACATAGATAGTCTTTATAAGGGTAGTGCAA ACCTCAACTCTTGAGCTAGCTTTTGTGGTGGAGTATAGGTCTCCCAATTTCTAATAATTACAATGTCCTGTAGTGTACTC ATTGCTTGAAATTATTTTGTACAATCCTTTTTTCTTGGGGATCATTTAGTTTTAACTCAAAATATCACATCACTCTCTTC TATTAAATAATAATAGCATATCTTCTGTAACACCATCCTTTACCTTTGAATCAAAAGGCTTGTGGTTTATGAGCTTTATT GTGCTGTTAGGTGCTAATATTAACTGTTTTTGTAATGGTGAAATTATAAGTTCAGTCCTTTCGTAGTAGGAAGTTGGAAC AAGTTTTAGCATTATGGGAGAGCAGAGCACTCAGCAACTCCCTCTTTACAAAATAACTTCTATTAAAAAATACATAAATT GCGATTGAATCCCTTTTTGATGTTCATGGCTTTCAGGCCACCTTTCTCTGTGACCTAAAGTTCCAATTTAATACCTCATT TTCCCTGAGCTCACTACGATTCACACCTAATTATTGACCTTGTTTATCCCAAACAATAGGAACCCTAAATCACTAAATCA GGGCGTGGTTACTCAACAAGGGTTGGGCACTGGAAAGCAATTGGTGATTATGTTTCTCAAGGGTTTAAGACGTTCAGTAA GCTTATTAAGCAGCATCAAGGCTGACAAGCAGTCCAACAACCACGATATTCTGAAGTTGTTGCTCTGATGATTCCTTTAT CCTATTATAATGTATTGTTGAGAAACTTTATTTTCTGCTTTCTTGATCTTGAATTTGATATATGTGGTTAAACTGGGAGA ATGCATGGCAAATACATTACATCATCTGAAGCTGGAATTGAAGTTTTAAATTTTGATATTTAATAGGCTTAAATACTCTA TAGGTCCCTGAAATTGTCTCCCGTACGAAAATAAGTCCCTGAAAAAAAAAATTCCGATTCCCAATCCCTACATTTTTTTT TTTAATCAGAATAGGTTCCTACTCGTGTTTCCAGCCTATGTGGCTTAATTTTTGTTGAGTCAATTATTCCACGTGGCTTT TATATTTTTTTTAAATACACATGGATTAAAAAAAATAAAATTAAACATTTAAAAAAAATAAAATTAAACATTTAAGTTTA ATTAGATTTAGGGATTTAGGGTTAATTACATTAAAATTTTTTTTTTAAATGTTTAATGTTATTTTTTTTAATCCATGTGT ATTTTTAAAAAAAATATAAAAGCCACGTGGAATAATTGACTTAGCAAAAATTAAGCCACATAGGCTGGAAACACGAGTAG GGACCTATTCTGATTAAAAAAATAATTTCAGGGATTCGGAATCGGAAAAAAAAATTTCAAGGACTTATTTTCATACGGGA GACAATTTCAAGGACTTCCAAAGTATTTAAGCCTATTTTTATTATAGATTTTGTTACATTTGTGGAGGGATTGTCATTTT CTGAATTGCTTGTAGTGAAGGTGATGGCTCTCCCGGCTGAAGATGGCAACATTGGGCGGTGAAGCAGATTATACAAGTCA AATTCTGAATTCCGGCAAGTCTGAGGTTGGTGCCCTCTATACAGAATTTTTTGATGGCAATGTAAAGAAAGGGGAAGATC AATATGTCAGTGACCTTGATGCTCTTTCTTATATTAGAATTTGGAAGTTCTGATTTATATGTAGAGCAGCCCTGATATGT CTCTCCAACATGTATAAAAAAGGAAAACAATGCCAGAATGCCGAAAATTGAGGCTTCACTAAGGCTATGAGGATATGCAT TTTTCTGCTAAGAACAAAGATCAAATGGACTTCTATTTTTCAGATTATCATTTTGTGGACAGTGAGATTGCCCATTTCTC GGTCTCTCAATAGCTAAGATGACATTTCTGATCTGGAATCACATTTCATGGGAGTTGAAATGACTAGGCCTTGGTACACT TCAAGAAACTATGAGTTGGTTTCCATGGTTGCTCATTAATCACTGGAGCATGTTCAGCACTGTGATCTGTCACCCCACAC TAGGCATTCTGGGAGAGAGCTGTCTTTCATAATTAGATCGTCCAGTTTCTGTTTTGAATCTCTTTTCGGAGGGGTTATGT CTTTGCATACTTTGTGATATGTACTATTAGCATGAAATGAGCAGCTGGAACAACTGGGATTGGATGACTAGTTTTGTCCA AACCAATACTGGAGATAAACAGAAGAAGTATTGGGGAAAAAGGAGAGAAGAGTCCTTGGGATTGTGACTTATATCACGGA TAACATACTTCTCATGTTGATTGATTAGTTGGTCATCTATATGCCCTTTTATCATACAAAGGCTCAACCCTTTCCATGCC TAACGTGTAGAGGATGCCCCCATCACCCCTTTCAGCTTCAGTAATCAGTAATAAGAAAAACAGATTACATGCTGAAAAAA GCACCAGCCTCAGCAACATCAGTAGAGCCGTTAAGTTAAAGAATGTGATTTGGTCTGGAGGTTGGTGCCAACAAGATCAA ATCTTCTAGGCTGCACAACAAAAGAAAATGCTTAAGCATGACAAATATAGTAGAACTTTGTGATGTTACTCATTATGAAA TTTAAGGCATTAGCCTGTTGTAGTTGGCATAAAACCATTTTTTTTAAAAACTAAATTCCATTAATCAAGAAAAAACAAGC TCATAGGTCAATACATCAGAATCAAACGAAACGAAACGAGATTAGCCAGGGAATCTGCTGCAGCACTATCGCCCATCGCC CCTCTATGAACAAAAGTAAACTCAATAAAATGAAAATGAAAGAAATGGTTGTTGGGAATCTTTCACAATTGTTCCCAAAG TTGTAAATCACAGACCGCAAAAAATAGTTGAGAGCCAATAGTGGTGATCTTTTAGAGCACTACGCTAGCGCGCTATAGCT TTGTTATATTAGTTATTTGAAAATAATTATCCTACCAAGGTAAGAACTACAACCAAGATCCAACAAACACTGCTTACAAA GATCCACTTGTGAGCACTACGCTAGCGCGCTATAGCTTTGTAAGAATCTTGAACCAAAGTTTTAGAATTCAGAATCTTGA ACATTATAGTTTAGTTTGTTTGCTATGTCACTAGTAGCCAC
CDS sequence (LotjaGi2g1v0021800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACTCTCATTCTCCCTCCCTTCCTCCAAATCCTCCAAGCACACCAACAAGCCCGATCACGGCGGCGACGACGACGG CGCCGGCGCCACCAAACATTTAATCACCGAATTCGACCCTTCCAAACCCCCACCTCTTTCCCAACCCAAAACCCTAATTC CCCCAATCCAAAACCAATGGCGTCCCCTCAAGAAACCCAAGATGAACAACCTCCTCCTCCCCCTCACCGAACCCCAGCAC CAACACTCCCTCGCCTTCGAACCTGACACCGCCGCCGCCGCGGAACCCGATTCCGACATCTCCTACGGCCTCAACCTCCG CCGCGACGCCAAGCAGACCGAAGACAACGCCCATGATGATGATGCCGCTGCTCCGCGGCGCCGTTTTCAGCCTGAAGCGA TGATGCTGCAGAAGCTTAAGGATGATCTGGAGAAGCTGCCGGATGACCAGGGGTTTGACGAGTTCAAGGATATCCCTGTC GAGGGCTTCGGCGCCGCGCTGCTCGCTGGTTACGGCTGGTCGGAAGGGATGGGGATTGGGAAGAACCCTAAGGAGGATGT TAAGGTGGTGGAGTACAAACGACGGGCTGGAAAGGAAGGATTGGGATTCGTCGGTGATGCACCGGTTTCCCGTCACCAGA AGAAGGAGGGTGGAGCAGCAGAGAATGGCAAGGAAAAGAAAGAGAAGGAGAAGGAGAAGGTTGTGAGAATTGTTGGGGGA AGAGATGCGGGGTTGAAGGGCAGTGTCGTGTCGAGAATTGGGGATGATTTTCTTGTGCTGAAACTCGTAGAGAGCGGGGA GCAAGTGAAGGTCAAGATGGGTGATGTTGCTGAATTGGGTTCTGTGGAAGAAGAGAGGTGCTTGAGAAAATTGAAGGACT TGAAGATTCGGCGTCGCAATGAGGACAAAGGGGCTAAGAGTAAACGTGGAAGGGATGGAGTTGAGGATATGAGAGGGGAT CGCGGCAGGGAAGAGCAGGGGAAGAAGCAGGCTTCTTGGCTTACAAGTCATATTCGGGTTAGGGTTGTCAGCCGAGATTT AAAAGGGGGGAGGTTGTATTTAAAGAAAGGAGAGATTTTGGATGTAGTTGGGCCTGCTACTTGTGATCTATCTTTGGATG ACAGCAGGGAGATCATTCAAGGAGTGTCTCAAGATCTTCTCGAGACAGTTATCCCGCGACGTGGGGGACCAGTTCTAGTG TTGTCTGGTAAACACAAGGGAGCCTTTGGGAGTCTGGTTGAGAAGGATTTGGACAGAGAAATTGCCATTGTTAGGGATGC TGACACCCATGAGCTGCTCAAAGTCAAACTTGAACAAGTTGCAGAATATATGGGGGACCCAAGCTTATTGGGACATTGA
Protein sequence (LotjaGi2g1v0021800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSFSLPSSKSSKHTNKPDHGGDDDGAGATKHLITEFDPSKPPPLSQPKTLIPPIQNQWRPLKKPKMNNLLLPLTEPQH QHSLAFEPDTAAAAEPDSDISYGLNLRRDAKQTEDNAHDDDAAAPRRRFQPEAMMLQKLKDDLEKLPDDQGFDEFKDIPV EGFGAALLAGYGWSEGMGIGKNPKEDVKVVEYKRRAGKEGLGFVGDAPVSRHQKKEGGAAENGKEKKEKEKEKVVRIVGG RDAGLKGSVVSRIGDDFLVLKLVESGEQVKVKMGDVAELGSVEEERCLRKLKDLKIRRRNEDKGAKSKRGRDGVEDMRGD RGREEQGKKQASWLTSHIRVRVVSRDLKGGRLYLKKGEILDVVGPATCDLSLDDSREIIQGVSQDLLETVIPRRGGPVLV LSGKHKGAFGSLVEKDLDREIAIVRDADTHELLKVKLEQVAEYMGDPSLLGH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 448 | 448 | 1.9E-123 | – | |
| MobiDBLite | 1 | 62 | 62 | - | – | |
| MobiDBLite | 14 | 32 | 19 | - | – | |
| MobiDBLite | 84 | 133 | 50 | - | – | |
| MobiDBLite | 102 | 133 | 32 | - | – | |
| Pfam | 147 | 203 | 57 | 2.1E-19 | ||
| SMART | 158 | 204 | 47 | 2.0E-7 | ||
| ProSiteProfiles | 160 | 206 | 47 | 11.382 | ||
| MobiDBLite | 203 | 232 | 30 | - | – | |
| MobiDBLite | 209 | 232 | 24 | - | – | |
| SMART | 228 | 255 | 28 | 1.7 | ||
| MobiDBLite | 299 | 330 | 32 | - | – | |
| Pfam | 331 | 378 | 48 | 1.4E-5 | ||
| SMART | 391 | 418 | 28 | 0.58 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi2g1v0021800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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