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IPR005824

Source: InterPro

Description

IPR005824 is a KOW.

<p>The KOW (Kyprides, Ouzounis, Woese) motif is found in a variety of ribosomal proteins and the bacterial transcription antitermination proteins NusG [[cite:PUB00005458]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 43

Transcript Name Description Predicted domains Domain count
Lj0g3v0002439.1
– PREDICTED: protein MOS2-like isoform X1 [Cicer arietinum] gi|502123464|ref|XP_004498120.1|
Domains
10
Lj0g3v0139769.1
– Global transcription factor group [Medicago truncatula] gi|357463691|ref|XP_003602127.1|
Domains
17
Lj0g3v0164819.1
– PREDICTED: 60S ribosomal protein L26-1-like [Glycine max] gi|356555056|ref|XP_003545855.1|
Domains
15
Lj0g3v0258039.1
– Putative transcription elongation factor SPT5-1-like protein [Aegilops tauschii] gi|475569805|gb|EMT15857.1|
Domains
18
Lj0g3v0258109.1
– PREDICTED: protein MOS2-like [Glycine max] gi|356521374|ref|XP_003529331.1|
Domains
10
Lj0g3v0272389.1
– PREDICTED: 50S ribosomal protein L24, chloroplastic-like [Cicer arietinum] gi|502083995|ref|XP_004487627.1|
Domains
21
Lj0g3v0293459.1
– 40S ribosomal protein S4 [Medicago truncatula] gi|357468567|ref|XP_003604568.1|
Domains
22
Lj0g3v0333779.1
– Plastid transcriptionally active isoform 1 [Theobroma cacao] gi|508715430|gb|EOY07327.1|
Domains
18
Lj0g3v0353419.1
– Global transcription factor group [Medicago truncatula] gi|357463691|ref|XP_003602127.1|
Domains
16
Lj0g3v0364329.1
– Putative transcription elongation factor SPT5-1-like protein [Aegilops tauschii] gi|475569805|gb|EMT15857.1|
Domains
18
Lj1g3v3028300.1
– PREDICTED: 50S ribosomal protein L24-like isoform X1 [Cicer arietinum] gi|502082834|ref|XP_004487287.1|
Domains
15
Lj2g3v1968310.1
– Translation protein SH3-like family protein [Theobroma cacao] gi|508717912|gb|EOY09809.1|
Domains
17
Lj2g3v2806670.1
– PREDICTED: 40S ribosomal protein S4-1-like [Glycine max] gi|356559288|ref|XP_003547932.1|
Domains
21
Lj4g3v2691780.1
– PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus] gi|449460010|ref|XP_004147739.1|
Domains
9
Lj5g3v2220290.1
– PREDICTED: transcription elongation factor SPT5-like [Fragaria vesca subsp]. vesca] gi|470146293|ref|XP_004308761.1|
Domains
10
LotjaGi1g1v0074400.1
– 40S ribosomal protein S4; TAIR: AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein; Swiss-Prot: sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1; TrEMBL-Plants: tr|A0A0S3R4D4|A0A0S3R4D4_PHAAN 40S ribosomal protein S4; Found in the gene: LotjaGi1g1v0074400
Domains
27
LotjaGi1g1v0074400.2
– 40S ribosomal protein S4; TAIR: AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein; Swiss-Prot: sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1; TrEMBL-Plants: tr|A0A0R4J5K4|A0A0R4J5K4_SOYBN 40S ribosomal protein S4; Found in the gene: LotjaGi1g1v0074400
Domains
24
LotjaGi1g1v0074400.3
– 40S ribosomal protein S4; TAIR: AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein; Swiss-Prot: sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1; TrEMBL-Plants: tr|A0A0L9UWB5|A0A0L9UWB5_PHAAN 40S ribosomal protein S4; Found in the gene: LotjaGi1g1v0074400
Domains
25
LotjaGi1g1v0273000.1
– Transcription elongation factor SPT5; TAIR: AT4G08350.1 global transcription factor group A2; Swiss-Prot: sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1; TrEMBL-Plants: tr|I1JYX6|I1JYX6_SOYBN Transcription elongation factor SPT5; Found in the gene: LotjaGi1g1v0273000
Domains
37
LotjaGi1g1v0445300.1
– 40S ribosomal protein S4; TAIR: AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein; Swiss-Prot: sp|P49204|RS42_ARATH 40S ribosomal protein S4-2; TrEMBL-Plants: tr|G7JLT2|G7JLT2_MEDTR 40S ribosomal protein S4; Found in the gene: LotjaGi1g1v0445300
Domains
28
LotjaGi1g1v0445300.2
– 40S ribosomal protein S4; TAIR: AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein; Swiss-Prot: sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3; TrEMBL-Plants: tr|G7JLT2|G7JLT2_MEDTR 40S ribosomal protein S4; Found in the gene: LotjaGi1g1v0445300
Domains
26
LotjaGi1g1v0445300.3
– 40S ribosomal protein S4; TAIR: AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein; Swiss-Prot: sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3; TrEMBL-Plants: tr|G7JLT2|G7JLT2_MEDTR 40S ribosomal protein S4; Found in the gene: LotjaGi1g1v0445300
Domains
25
LotjaGi1g1v0516200.1
– 50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp|Q47LK4|RL24_THEFY 50S ribosomal protein L24; TrEMBL-Plants: tr|I3S275|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0516200
Domains
16
LotjaGi1g1v0516200.2
– 50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp|Q47LK4|RL24_THEFY 50S ribosomal protein L24; TrEMBL-Plants: tr|I3S275|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0516200
Domains
16
LotjaGi2g1v0021800.1
– G-patch domain-containing protein; TAIR: AT1G33520.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9C801|MOS2_ARATH Protein MOS2; TrEMBL-Plants: tr|K7L2Q5|K7L2Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0021800
Domains
11
LotjaGi2g1v0021800.2
– G-patch domain-containing protein; TAIR: AT1G33520.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9C801|MOS2_ARATH Protein MOS2; TrEMBL-Plants: tr|K7L2Q5|K7L2Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0021800
Domains
11
LotjaGi2g1v0021800.3
– G-patch domain-containing protein; TAIR: AT1G33520.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9C801|MOS2_ARATH Protein MOS2; TrEMBL-Plants: tr|K7L2Q5|K7L2Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0021800
Domains
11
LotjaGi2g1v0409300.1
– Ribosomal protein L24; TAIR: AT3G49910.1 Translation protein SH3-like family protein; Swiss-Prot: sp|P51414|RL261_ARATH 60S ribosomal protein L26-1; TrEMBL-Plants: tr|I3SSN9|I3SSN9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0409300
Domains
19
LotjaGi3g1v0218100.1
– Transcription termination/antitermination protein NusG; TAIR: AT3G09210.1 plastid transcriptionally active 13; Swiss-Prot: sp|Q9HWC4|NUSG_PSEAE Transcription termination/antitermination protein NusG; TrEMBL-Plants: tr|A0A151TKX6|A0A151TKX6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0218100
Domains
20
LotjaGi3g1v0233600.1
– 50S ribosomal L24-like protein; TAIR: AT5G54600.1 Translation protein SH3-like family protein; Swiss-Prot: sp|P11893|RK24_PEA 50S ribosomal protein L24, chloroplastic; TrEMBL-Plants: tr|C6T0A2|C6T0A2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0233600
Domains
22
LotjaGi5g1v0169700.1
– 50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp|A9VP88|RL24_BACWK 50S ribosomal protein L24; TrEMBL-Plants: tr|I3S275|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0169700
Domains
16
LotjaGi5g1v0169700.2
– 50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp|A9VP88|RL24_BACWK 50S ribosomal protein L24; TrEMBL-Plants: tr|I3S275|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0169700
Domains
16
LotjaGi5g1v0169700.3
– 50S ribosomal L24-like protein; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp|A9VP88|RL24_BACWK 50S ribosomal protein L24; TrEMBL-Plants: tr|I3S275|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0169700
Domains
16
LotjaGi5g1v0342300_LC.1
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.2
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.3
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.4
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.5
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.6
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.7
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi6g1v0243000.1
– 60S ribosomal protein L27; TAIR: AT4G15000.1 Ribosomal L27e protein family; Swiss-Prot: sp|Q05462|RL27_PEA 60S ribosomal protein L27; TrEMBL-Plants: tr|I1MGV6|I1MGV6_SOYBN 60S ribosomal protein L27; Found in the gene: LotjaGi6g1v0243000
Domains
15
LotjaGi6g1v0337500.1
– 60S ribosomal protein L26, putative; TAIR: AT3G49910.1 Translation protein SH3-like family protein; Swiss-Prot: sp|P51414|RL261_ARATH 60S ribosomal protein L26-1; TrEMBL-Plants: tr|A0A151T7I3|A0A151T7I3_CAJCA 60S ribosomal protein L26-1; Found in the gene: LotjaGi6g1v0337500
Domains
19
LotjaGi6g1v0363100.1
– 60S ribosomal protein L27; TAIR: AT4G15000.1 Ribosomal L27e protein family; Swiss-Prot: sp|Q05462|RL27_PEA 60S ribosomal protein L27; TrEMBL-Plants: tr|I3SZQ1|I3SZQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0363100
Domains
13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd06090 CDD 1 2.33