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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR041330
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.911s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0037800.1
n.a. DNA/RNA-binding protein KIN17; TAIR: AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region; Swiss-Prot: sp|Q9ZVU5|KIN17_ARATH KIN17-like protein; TrEMBL-Plants: tr|A0A151U225|A0A151U225_CAJCA DNA/RNA-binding protein KIN17; Found in the gene: LotjaGi1g1v0037800 LjG1.1_chr1 5273762 5277563 +
2 domain predictions
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LotjaGi1g1v0037800.2
n.a. DNA/RNA-binding protein KIN17; TAIR: AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region; Swiss-Prot: sp|Q9ZVU5|KIN17_ARATH KIN17-like protein; TrEMBL-Plants: tr|A0A151U225|A0A151U225_CAJCA DNA/RNA-binding protein KIN17; Found in the gene: LotjaGi1g1v0037800 LjG1.1_chr1 5275492 5276688 +
2 domain predictions
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LotjaGi2g1v0021800.1
n.a. G-patch domain-containing protein; TAIR: AT1G33520.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9C801|MOS2_ARATH Protein MOS2; TrEMBL-Plants: tr|K7L2Q5|K7L2Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0021800 LjG1.1_chr2 7707378 7713898 -
2 domain predictions
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LotjaGi2g1v0021800.2
n.a. G-patch domain-containing protein; TAIR: AT1G33520.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9C801|MOS2_ARATH Protein MOS2; TrEMBL-Plants: tr|K7L2Q5|K7L2Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0021800 LjG1.1_chr2 7707378 7715116 -
2 domain predictions
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LotjaGi2g1v0021800.3
n.a. G-patch domain-containing protein; TAIR: AT1G33520.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9C801|MOS2_ARATH Protein MOS2; TrEMBL-Plants: tr|K7L2Q5|K7L2Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0021800 LjG1.1_chr2 7707821 7713769 -
2 domain predictions
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LotjaGi3g1v0313800.1
n.a. DNA/RNA-binding protein KIN17; TAIR: AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region; Swiss-Prot: sp|Q9ZVU5|KIN17_ARATH KIN17-like protein; TrEMBL-Plants: tr|A0A151U225|A0A151U225_CAJCA DNA/RNA-binding protein KIN17; Found in the gene: LotjaGi3g1v0313800 LjG1.1_chr3 66417413 66427911 +
2 domain predictions
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LotjaGi3g1v0313800.2
n.a. DNA/RNA-binding protein KIN17; TAIR: AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region; Swiss-Prot: sp|Q9ZVU5|KIN17_ARATH KIN17-like protein; TrEMBL-Plants: tr|A0A151U225|A0A151U225_CAJCA DNA/RNA-binding protein KIN17; Found in the gene: LotjaGi3g1v0313800 LjG1.1_chr3 66419911 66423298 +
2 domain predictions
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LotjaGi3g1v0313800.3
n.a. DNA/RNA-binding protein KIN17; TAIR: AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region; Swiss-Prot: sp|Q9ZVU5|KIN17_ARATH KIN17-like protein; TrEMBL-Plants: tr|A0A151U225|A0A151U225_CAJCA DNA/RNA-binding protein KIN17; Found in the gene: LotjaGi3g1v0313800 LjG1.1_chr3 66419947 66423371 +
2 domain predictions
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LotjaGi3g1v0313800.4
n.a. DNA/RNA-binding protein KIN17; TAIR: AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region; Swiss-Prot: sp|Q9ZVU5|KIN17_ARATH KIN17-like protein; TrEMBL-Plants: tr|A0A151U225|A0A151U225_CAJCA DNA/RNA-binding protein KIN17; Found in the gene: LotjaGi3g1v0313800 LjG1.1_chr3 66421854 66423050 +
2 domain predictions
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LotjaGi3g1v0527700.1
n.a. DNA/RNA-binding protein KIN17; TAIR: AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region; Swiss-Prot: sp|Q9ZVU5|KIN17_ARATH KIN17-like protein; TrEMBL-Plants: tr|A0A151U225|A0A151U225_CAJCA DNA/RNA-binding protein KIN17; Found in the gene: LotjaGi3g1v0527700 LjG1.1_chr3 94414825 94417588 -
2 domain predictions
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LotjaGi3g1v0527700.2
n.a. DNA/RNA-binding protein KIN17; TAIR: AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region; Swiss-Prot: sp|Q9ZVU5|KIN17_ARATH KIN17-like protein; TrEMBL-Plants: tr|A0A151U225|A0A151U225_CAJCA DNA/RNA-binding protein KIN17; Found in the gene: LotjaGi3g1v0527700 LjG1.1_chr3 94414962 94417588 -
2 domain predictions
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