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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0152900 |
Transcript ID | LotjaGi2g1v0152900.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT1G52540.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|A0A0S3TC73|A0A0S3TC73_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0152900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:55024285..55027574) extracted from Lotus japonicus Gifu genome v1.2.
GTCAAAAATGGCTGCTAATTGATGTGTTCGAAAAGTGTTACATGATTTTGAATGTCTATGTTAAAAATCTTATAATAAAA TAAAATGCTCAAGTGTGTAGTTGTTGCAACCCTAACAGGACTATAAATGTGACAGTTTCCAATGGAAGAGGTAGCTCGCC GAAGCCAGCAAACATTACCATTTTGTGTTTCTATCATTAACCTTCAGATTCTTCTTGGAAGAAATGTACTTGAAACGTTA TTGTTGTTTCCCCTCAGACAATGAGCAAAGCAAACTTAAGTATGGTAAATTTTTATCAAACATAATTGTATGTTTTATCA CAAATTAATATCAGTTTCACAAGTTATCTGTGGATTTTTTGTTTTTACTGACAATAGGTTTGACAGCAATAGGGACTATC CATGGGAAATGTACACCTTGAAGGAGTTGCTTCGTGCAACAAACAACTTTCATCACGATAATAAGATTGGAGAGGGTGGA TTTGGAAGTGTTTATTTTGGTCGAACAATTGAAGGCATTGAGGTTTGTGTTTGAGGTTATAGTTATACAATACAACCCAT CTTTTAGATCTCAATTTGAATTATGTTTGTGTTTAAAGTTAGCATTAGACATTTTTGAGCATGCATAACAGAGATTTTCA TGACTGAGTAATAATGGAATTTGCGCGCAGATTGCGGTGAAGCGGTTGAAGATGATGACGGCGAAGGCGGAGATGGAGTT TGCAGTAGAAGTGGAAGTACTTGGAAGAGTGAGGCATAAAAATTTGTTGGGATTGAGGGGTTACTATGCAGGGGAAAATG AAAGGTTAATTGTGTATGATTACATGCCAAATCATAGTTTGCTCACTCATTTGCATGGTCCACTCTCTAAGGAATGTCAT CTAGATTGGAGTAGAAGGATGAGTATTGCAATTGGAGCTGCTGAAGCTGTGGCGTAAGTGTAACTTACCCTCTCTGTATT TCCACTTTTGATCCACATCCTTCTCTGCTTTATAATGGAATGTTTTAGTTAAAATTCCTCACTGAAAGCACAACACCTGA GAAATCAAATACTATGATGGCATGATCTATTAAGTTTTAAAATCTTTAGTTTCAATTACTCAATGCTCAGATGAAGTGTG TAAATTGTGGTCTAAAACCACATTTAAAGCTGCAATTCTAATCATTCCTAAGAATGAAATTACTACCGATTTTCATTCAT TTCATTCTCATTAAATAGGTTGGGAATAAATTATCATTAGTAATTATATTCCTTGGAATGTAGCAATAACATTTTTCTAA GTGGAAGGAATCTGAGTCTCTTAAGCATGTGGTTCTGCCTTGATCCATGTTTATGAAAAAGAAAAAAACATTGTTGGAAA AGTCTTAGGAGATTAGTCACTCACTCACCTATAGAGTAGGAGAATACTCTGGTAAATCAAAAAGATATATTCCTTAGAAT ATTATTTCAGAGAACGTATTGTCAAATCTTAAAACAAATCCCCTTATGCTTTTAGAATGTTTGCAACTGCCCATTAGCTC CATTTGTACACATCTAAATCTCGAAGAGATTGGTTTCATTATTGCCGATTGTGAGATACGTTGCGGAAAAAAATTCTCCA ATTGATAATATTCCATTTATGCCATATGAGATAAATGTGGTATGTATAAATAAATGAACTATGTCATCAATTATCTATTT CCTTTTCATGTTAAGGTATTTGCACCATGAGTCAACTCCTCACATCATACACAGAGATATAAAGGCAAGCAATGTTCTTC TAGACACTGAATTTCAAGCAATGGTTGCTGATTTTGGCTTTGCAAAGCTAGTACCAGATGGTGTGACCCATCTCACCACA AAGGTTAAAGGCACATTAGGATATTTGGCACCAGAATACGCCATGTGGGGAAAAGTTTCTGAGAGCTGTGATGTTTACAG CTTTGGGATTTTGCTGTTGGAGATTGTCAGTGCCAAGAGACCAATTGAGAAATTCCCGGGGGGAGTGAAAAGGGATGTTG TTCAATGGGCCACACCATTATTGAAGAAGGGTTTGTTTTATAATATTGCAGATCCAAAGTTGAAGGGTGAATTTGATATG GAGCAATTGAAAATAGTGACTGCAATAGCTATGAAATGCACTGATAGCAGTGCGGAGAAGAGGCCTACCATGACAGAAGT AGTGGATATGCTGAAGGATGGTATAGGGAAGAGAAGTGATTATTCCAATTTTAAGAAGAATATTATTGACCAAAAAAGTA AGAAGAATATTGAAGATGAAGAAAATGAAAAAAACTATTTGTATTAGGAGACAGAAATGATGTAATCAAAGTTGAAAAAT ACCACCTGATATGTATGAAGTCTTTTTTTTTAACTTTAACCAATTCTATAAAATCAAGCAGCATAGACGCCAAAATGTTG GAACGAACAAAAGAGTCTAGACCAGGGCAAGAAAGTCTGCGGCACTATTGCCGGATCTACGAACAAAAGAAATATCCATG CGAGTAAAAGATAAAGCTAAGGAACGACAATCCTCAAGAACCAAATCAAGATAAGAGTAGTCTCTACTGCGACGTCACCA CCACTGAAACAGCTGCAAAGAATCTGTCTCAAAACAAACGGAGAAGAACCCCAAATCAAGAGCAAGGCGCATCGCCCACC GCAAGCAAAGGGCCTCCGCTAAACCCGTTGATTGCATCATCACCGGAGTTAGAGTGGCCGCCGCAAGGAGCTCTCCTGCC TCATCCCTTGCTACCATGACAAACGATGCCAAGGATCGTCGGACCAACGCGTCCACATTGACTTTGATCCACCCAACCGG AGGCCTCGTCCATGTCACAGCATCAGACCCTGGAACACGCTGAAACGCTACTAGTCTAGGCAAGGCTTCAAGAGCTTCCA GCCGAGAGAAGATGTGGTGAACAGACAGCTCTCTCCCTTCAAAAACTCGAGCATTCTTGGCCTCCCATAACACATACACC AGTGTGAGAACCCTCGCGATTACCTCCTACCCACACCCTCCACGATTCGTGACACCTTTTTTTTTTTACTGAACGCTCAA TTTGCTCCCTGGAAATTTTTGTTGCGGACAAGTTAATCATTTTAAGGAAATTTGAAGGTTTCTAAATTCATAAAACGCAT GTAAGGGAGTAATTTGACAGTGAAAATTAATTTAACCGACATTTTAAACATTTAAAATTTTATAAATATATATGTTCCGG TGACTAATTTACCCATGGAAAATTCTTTCAAGTACCAAATTAACATTATATTATTTTTTAAGGGGATTGTTTATGAAATA TAGTCTATAC
CDS sequence (LotjaGi2g1v0152900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACTTGAAACGTTATTGTTGTTTCCCCTCAGACAATGAGCAAAGCAAACTTAAGTTTGACAGCAATAGGGACTATCC ATGGGAAATGTACACCTTGAAGGAGTTGCTTCGTGCAACAAACAACTTTCATCACGATAATAAGATTGGAGAGGGTGGAT TTGGAAGTGTTTATTTTGGTCGAACAATTGAAGGCATTGAGATTGCGGTGAAGCGGTTGAAGATGATGACGGCGAAGGCG GAGATGGAGTTTGCAGTAGAAGTGGAAGTACTTGGAAGAGTGAGGCATAAAAATTTGTTGGGATTGAGGGGTTACTATGC AGGGGAAAATGAAAGGTTAATTGTGTATGATTACATGCCAAATCATAGTTTGCTCACTCATTTGCATGGTCCACTCTCTA AGGAATGTCATCTAGATTGGAGTAGAAGGATGAGTATTGCAATTGGAGCTGCTGAAGCTGTGGCGTATTTGCACCATGAG TCAACTCCTCACATCATACACAGAGATATAAAGGCAAGCAATGTTCTTCTAGACACTGAATTTCAAGCAATGGTTGCTGA TTTTGGCTTTGCAAAGCTAGTACCAGATGGTGTGACCCATCTCACCACAAAGGTTAAAGGCACATTAGGATATTTGGCAC CAGAATACGCCATGTGGGGAAAAGTTTCTGAGAGCTGTGATGTTTACAGCTTTGGGATTTTGCTGTTGGAGATTGTCAGT GCCAAGAGACCAATTGAGAAATTCCCGGGGGGAGTGAAAAGGGATGTTGTTCAATGGGCCACACCATTATTGAAGAAGGG TTTGTTTTATAATATTGCAGATCCAAAGTTGAAGGGTGAATTTGATATGGAGCAATTGAAAATAGTGACTGCAATAGCTA TGAAATGCACTGATAGCAGTGCGGAGAAGAGGCCTACCATGACAGAAGTAGTGGATATGCTGAAGGATGGTATAGGGAAG AGAAGTGATTATTCCAATTTTAAGAAGAATATTATTGACCAAAAAAGTAAGAAGAATATTGAAGATGAAGAAAATGAAAA AAACTATTTGTATTAG
Protein sequence (LotjaGi2g1v0152900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYLKRYCCFPSDNEQSKLKFDSNRDYPWEMYTLKELLRATNNFHHDNKIGEGGFGSVYFGRTIEGIEIAVKRLKMMTAKA EMEFAVEVEVLGRVRHKNLLGLRGYYAGENERLIVYDYMPNHSLLTHLHGPLSKECHLDWSRRMSIAIGAAEAVAYLHHE STPHIIHRDIKASNVLLDTEFQAMVADFGFAKLVPDGVTHLTTKVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVS AKRPIEKFPGGVKRDVVQWATPLLKKGLFYNIADPKLKGEFDMEQLKIVTAIAMKCTDSSAEKRPTMTEVVDMLKDGIGK RSDYSNFKKNIIDQKSKKNIEDEENEKNYLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 9 | 118 | 110 | 1.3E-28 | – | |
SUPERFAMILY | 24 | 315 | 292 | 1.89E-77 | ||
PANTHER | 26 | 319 | 294 | 2.5E-124 | – | |
PANTHER | 26 | 319 | 294 | 2.5E-124 | – | |
ProSiteProfiles | 43 | 318 | 276 | 35.156 | ||
Pfam | 43 | 312 | 270 | 1.8E-42 | ||
SMART | 43 | 314 | 272 | 9.3E-28 | ||
ProSitePatterns | 49 | 71 | 23 | - | ||
Gene3D | 119 | 343 | 225 | 8.8E-60 | – | |
ProSitePatterns | 165 | 177 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0152900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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