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LotjaGi2g1v0152900.3

Overview

Field Value
Gene ID LotjaGi2g1v0152900
Transcript ID LotjaGi2g1v0152900.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G52540.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|A0A0S3TC73|A0A0S3TC73_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0152900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:55024524..55027458) extracted from Lotus japonicus Gifu genome v1.2.

AGGACTATAAATGTGACAGTTTCCAATGGAAGAGGTAGCTCGCCGAAGCCAGCAAACATTACCATTTTGTGTTTCTATCA TTAACCTTCAGATTCTTCTTGGAAGAAATGTACTTGAAACGTTATTGTTGTTTCCCCTCAGACAATGAGCAAAGCAAACT TAAGTATGGTAAATTTTTATCAAACATAATTGTATGTTTTATCACAAATTAATATCAGTTTCACAAGTTATCTGTGGATT TTTTGTTTTTACTGACAATAGGTTTGACAGCAATAGGGACTATCCATGGGAAATGTACACCTTGAAGGAGTTGCTTCGTG CAACAAACAACTTTCATCACGATAATAAGATTGGAGAGGGTGGATTTGGAAGTGTTTATTTTGGTCGAACAATTGAAGGC ATTGAGGTTTGTGTTTGAGGTTATAGTTATACAATACAACCCATCTTTTAGATCTCAATTTGAATTATGTTTGTGTTTAA AGTTAGCATTAGACATTTTTGAGCATGCATAACAGAGATTTTCATGACTGAGTAATAATGGAATTTGCGCGCAGATTGCG GTGAAGCGGTTGAAGATGATGACGGCGAAGGCGGAGATGGAGTTTGCAGTAGAAGTGGAAGTACTTGGAAGAGTGAGGCA TAAAAATTTGTTGGGATTGAGGGGTTACTATGCAGGGGAAAATGAAAGGTTAATTGTGTATGATTACATGCCAAATCATA GTTTGCTCACTCATTTGCATGGTCCACTCTCTAAGGAATGTCATCTAGATTGGAGTAGAAGGATGAGTATTGCAATTGGA GCTGCTGAAGCTGTGGCGTAAGTGTAACTTACCCTCTCTGTATTTCCACTTTTGATCCACATCCTTCTCTGCTTTATAAT GGAATGTTTTAGTTAAAATTCCTCACTGAAAGCACAACACCTGAGAAATCAAATACTATGATGGCATGATCTATTAAGTT TTAAAATCTTTAGTTTCAATTACTCAATGCTCAGATGAAGTGTGTAAATTGTGGTCTAAAACCACATTTAAAGCTGCAAT TCTAATCATTCCTAAGAATGAAATTACTACCGATTTTCATTCATTTCATTCTCATTAAATAGGTTGGGAATAAATTATCA TTAGTAATTATATTCCTTGGAATGTAGCAATAACATTTTTCTAAGTGGAAGGAATCTGAGTCTCTTAAGCATGTGGTTCT GCCTTGATCCATGTTTATGAAAAAGAAAAAAACATTGTTGGAAAAGTCTTAGGAGATTAGTCACTCACTCACCTATAGAG TAGGAGAATACTCTGGTAAATCAAAAAGATATATTCCTTAGAATATTATTTCAGAGAACGTATTGTCAAATCTTAAAACA AATCCCCTTATGCTTTTAGAATGTTTGCAACTGCCCATTAGCTCCATTTGTACACATCTAAATCTCGAAGAGATTGGTTT CATTATTGCCGATTGTGAGATACGTTGCGGAAAAAAATTCTCCAATTGATAATATTCCATTTATGCCATATGAGATAAAT GTGGTATGTATAAATAAATGAACTATGTCATCAATTATCTATTTCCTTTTCATGTTAAGGTATTTGCACCATGAGTCAAC TCCTCACATCATACACAGAGATATAAAGGCAAGCAATGTTCTTCTAGACACTGAATTTCAAGCAATGGTTGCTGATTTTG GCTTTGCAAAGCTAGTACCAGATGGTGTGACCCATCTCACCACAAAGGTTAAAGGCACATTAGGATATTTGGCACCAGAA TACGCCATGTGGGGAAAAGTTTCTGAGAGCTGTGATGTTTACAGCTTTGGGATTTTGCTGTTGGAGATTGTCAGTGCCAA GAGACCAATTGAGAAATTCCCGGGGGGAGTGAAAAGGGATGTTGTTCAATGGGCCACACCATTATTGAAGAAGGGTTTGT TTTATAATATTGCAGATCCAAAGTTGAAGGGTGAATTTGATATGGAGCAATTGAAAATAGTGACTGCAATAGCTATGAAA TGCACTGATAGCAGTGCGGAGAAGAGGCCTACCATGACAGAAGTAGTGGATATGCTGAAGGATGGTATAGGGAAGAGAAG TGATTATTCCAATTTTAAGAAGAATATTATTGACCAAAAAAGTAAGAAGAATATTGAAGATGAAGAAAATGAAAAAAACT ATTTGTATTAGGAGACAGAAATGATGTAATCAAAGTTGAAAAATACCACCTGATATGTATGAAGTCTTTTTTTTTAACTT TAACCAATTCTATAAAATCAAGCAGCATAGACGCCAAAATGTTGGAACGAACAAAAGAGTCTAGACCAGGGCAAGAAAGT CTGCGGCACTATTGCCGGATCTACGAACAAAAGAAATATCCATGCGAGTAAAAGATAAAGCTAAGGAACGACAATCCTCA AGAACCAAATCAAGATAAGAGTAGTCTCTACTGCGACGTCACCACCACTGAAACAGCTGCAAAGAATCTGTCTCAAAACA AACGGAGAAGAACCCCAAATCAAGAGCAAGGCGCATCGCCCACCGCAAGCAAAGGGCCTCCGCTAAACCCGTTGATTGCA TCATCACCGGAGTTAGAGTGGCCGCCGCAAGGAGCTCTCCTGCCTCATCCCTTGCTACCATGACAAACGATGCCAAGGAT CGTCGGACCAACGCGTCCACATTGACTTTGATCCACCCAACCGGAGGCCTCGTCCATGTCACAGCATCAGACCCTGGAAC ACGCTGAAACGCTACTAGTCTAGGCAAGGCTTCAAGAGCTTCCAGCCGAGAGAAGATGTGGTGAACAGACAGCTCTCTCC CTTCAAAAACTCGAGCATTCTTGGCCTCCCATAACACATACACCAGTGTGAGAACCCTCGCGATTACCTCCTACCCACAC CCTCCACGATTCGTGACACCTTTTTTTTTTTACTGAACGCTCAATTTGCTCCCTG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0152900.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTTTATCACAAATTAATATCAGTTTCACAAGTTATCTGTGGATTTTTTGTTTTTACTGACAATAGGTTTGACAGCAA TAGGGACTATCCATGGGAAATGTACACCTTGAAGGAGTTGCTTCGTGCAACAAACAACTTTCATCACGATAATAAGATTG GAGAGGGTGGATTTGGAAGTGTTTATTTTGGTCGAACAATTGAAGGCATTGAGATTGCGGTGAAGCGGTTGAAGATGATG ACGGCGAAGGCGGAGATGGAGTTTGCAGTAGAAGTGGAAGTACTTGGAAGAGTGAGGCATAAAAATTTGTTGGGATTGAG GGGTTACTATGCAGGGGAAAATGAAAGGTTAATTGTGTATGATTACATGCCAAATCATAGTTTGCTCACTCATTTGCATG GTCCACTCTCTAAGGAATGTCATCTAGATTGGAGTAGAAGGATGAGTATTGCAATTGGAGCTGCTGAAGCTGTGGCGTAT TTGCACCATGAGTCAACTCCTCACATCATACACAGAGATATAAAGGCAAGCAATGTTCTTCTAGACACTGAATTTCAAGC AATGGTTGCTGATTTTGGCTTTGCAAAGCTAGTACCAGATGGTGTGACCCATCTCACCACAAAGGTTAAAGGCACATTAG GATATTTGGCACCAGAATACGCCATGTGGGGAAAAGTTTCTGAGAGCTGTGATGTTTACAGCTTTGGGATTTTGCTGTTG GAGATTGTCAGTGCCAAGAGACCAATTGAGAAATTCCCGGGGGGAGTGAAAAGGGATGTTGTTCAATGGGCCACACCATT ATTGAAGAAGGGTTTGTTTTATAATATTGCAGATCCAAAGTTGAAGGGTGAATTTGATATGGAGCAATTGAAAATAGTGA CTGCAATAGCTATGAAATGCACTGATAGCAGTGCGGAGAAGAGGCCTACCATGACAGAAGTAGTGGATATGCTGAAGGAT GGTATAGGGAAGAGAAGTGATTATTCCAATTTTAAGAAGAATATTATTGACCAAAAAAGTAAGAAGAATATTGAAGATGA AGAAAATGAAAAAAACTATTTGTATTAG
Download CDS Sequence

Protein sequence (LotjaGi2g1v0152900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFYHKLISVSQVICGFFVFTDNRFDSNRDYPWEMYTLKELLRATNNFHHDNKIGEGGFGSVYFGRTIEGIEIAVKRLKMM TAKAEMEFAVEVEVLGRVRHKNLLGLRGYYAGENERLIVYDYMPNHSLLTHLHGPLSKECHLDWSRRMSIAIGAAEAVAY LHHESTPHIIHRDIKASNVLLDTEFQAMVADFGFAKLVPDGVTHLTTKVKGTLGYLAPEYAMWGKVSESCDVYSFGILLL EIVSAKRPIEKFPGGVKRDVVQWATPLLKKGLFYNIADPKLKGEFDMEQLKIVTAIAMKCTDSSAEKRPTMTEVVDMLKD GIGKRSDYSNFKKNIIDQKSKKNIEDEENEKNYLY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
21 122 102 2.4E-28 –
SUPERFAMILY
SSF56112
28 319 292 1.89E-77
IPR011009
PANTHER
PTHR27001
30 323 294 2.7E-124 –
PANTHER
PTHR27001:SF178
30 323 294 2.7E-124 –
ProSiteProfiles
PS50011
47 322 276 35.156
IPR000719
Pfam
PF00069
47 316 270 1.9E-42
IPR000719
SMART
SM00220
47 318 272 9.3E-28
IPR000719
ProSitePatterns
PS00107
53 75 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
123 347 225 9.1E-60 –
ProSitePatterns
PS00108
169 181 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0152900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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