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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0214500 |
Transcript ID | LotjaGi2g1v0214500.2 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|K7L0H3|K7L0H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:66469730..66473566) extracted from Lotus japonicus Gifu genome v1.2.
ATTGACATGAAGTGGTTTGATAATCAGGAAAGAGGAAGAATTATGATGAAATGGGCAGAGCTAATTGATCAAAACATAGA AGAAATAGCAGCACTAGATGCCATTGATGCTGGAAAGTTATTCCAATGGTGTAAGAACGTTGACATTCCTGGAGCAGCAA ACACTATACGGTACTATGCTGGTGCTGCTGATAAAATTCATGGTGAGGTGTTGAAACATTCTCGGGAGATGCATGCGTAT ACTCTATTAGAACCAATTGGTGTTGTGGGACACATCATTCCCTGGAACTTCCCTAGCACCATGTTTGTTGCCAAGGTTGG TCCTTCCTTAGCTGCTGGTTGCACAATGGTTCTCAAGCCTGCTGAACAAACACCACTTTCAGCTTTGTTTTATGCTCATT TAGCTAAGCAGGTATGTCTCCAACAAATGCTTCATATTTCCTTATCAATCATAATTGACTTTCACGAGTTAGAGGGTGTC CGGATACTAGTTGAGTGTAAGATGAATAGACTTTCATTTTCCATTCACTTTTTATCTCGAAGTGAATGTTAATGTCTGTT TACACTAGCGCTAACATGTATCCAAACATAGCCTTAACTGCTTGGGGCAAAGCTGAATATTGGTTTTGCTTGTTTTTATC TTTTGAAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTGCCCGGATTCGGTCACACTGCAGGTGCTGCAATAAGCTCT CACATGGACATTGATAAGGTAACTCAAATGCCGATTATTAGAATTCGAGTTAGGCATAACTCGAATTTGGGTTAGTGATA ATTCCTAGGCAAGTGTACCTATTCGTTAAGTAGTAATAAATTATCGAACTCAAGGATTGCGATCGTCTAAAGCAATTTAA CTTATTAAATAACTAAAAAGACTAAGGAAAAAGGTTTGGGGATGGATAATTGTTGTTGAAACGAACTTAATTAATTGCAA AGTAAAGTGAAAAGCAAGTACGTAGTATTGAAAACAATCAAAAGGGGAAGTACCTGGGGTAGGATTTCATCAATTTCACT TATGTTCTTAATAGACTAATTAACTCATGAATTATCTAACTTATTTATGGTGCTTGCCTAAGTTTCTACGTGATAATCTC TTAACTACGTAGAACTTCCAATTAAACTACTAACACTAATCTCTTAGTTCCTAGACGAATTTAATTGGAGAATTAAAACA CTTAGTTACTAGCCAACACAATTAGAAGTTACCCTTATCTCTAAGGCGTAGGCGTTCCTAATCAATTCCTCACCGGATCC ATATTTTATACCGATTTCTCAATCGCATACAAAATAGCAAATTAAGTTAATCTTCATGCATAAAGATTCATAGATAAAAG ATGAGAAATTCATAAATAAAAATAGGATTCATGAGTCTAAAAAGTATATCAAAACATAAGATCAAAAGAGTCAAATCAGA CACTCCAAGTACCTACGGAGGTTTAGCCAAGCATGACTTCCATGATCAAATAATTTATTGAAATAAAAAGGTTCTTCAAA AAGCTTCAAGTGCTAGGGTTAACTCCAGGAAAAAACTCAAAAACGGCTGCTGCTCTCAATACTGATCCCGTTTTTCTCCT CTGGTTCCAATATATATATTTCCGTTTCTTTCATTCCGTTTTCGTCTTTATCCCAAGTACAATCTGTTTTCAATCACGTG ATCACCTTTTCTGTAGATTTTGCTTTTGGTCCAACTCTTGCCACGTGTCGCGTTGTAATTGGACCGAACTTTAAGTGTGT ATTCCAGTACTTCGCGCACCACCATTCTTATGGTAGCCCTTCGTCATGATTGTAGCACATGGCAAAGAAGAAAACACCAA CCGTTGGATCCACGCAGGTGCATGGTAAATTCCATGGAACAGCAGCGCCGGATCAGCTCCATTTTCCTGATTTTCTCTTT TCCTTTTATTCTGAAAATCCTAAAAAGATAAAATAAATTAAAATAAATATTAAAAAGATAATAACTCAAAATAAAACATA TCAACTAAAAATAAAATAACTTAAATCCTAATAAATCAAAATAAAAATCATAAAAATATATAAAAATACTAAAAACCACA TAAAAATAGTAAAATGCATGGAATAATCATGAAGTGACCTAAAATGACCAAAATATCCTAAATAATATGCCAAAATGCAT GGAAATAAACTAGAAAAATAGCTTAAACACTCGGGTCATCAGTTAGGCTCTAATATCATATTAGAATTCGGGTTAGGCAT AACTCTACTCCAAAAATTCGTTTAAAAGTGTGGATTGCTCTACTCTTTATAAGGATCTATCAAGCCATACCTGTGGTCAA CAAGGAACCTTAATACCAATCATTTGGAAGTACCTTTGATTTAAAGTAAAACTAACAGAATTTTCTTGATTGTGTATATG TAGGTCAGCTTCACTGGTTCAACAGAAGTAGGCAGACAAGTAATGCAAGCTGCTGCTAAGAGTAATTTGAAACCAGTTTC ACTTGAATTAGGAGGCAAGTCACCCCTTGTAATCTTTGATGATGCTGATGTGGATAAAGCTGCTGAGCTTGCTCTCTTGG GCATTCTATTTAACAAGGTGAAGTTTTTTTCATGAAATCCAAATCTTTATTACAAATTATAAGCCCAATTATGAATTCTC TAACAATCTTTTATATACTTGTTTGATTTCAGGGAGAAATTTGTGTTGCCGGCTCCCGTGTATTTGTTCAGGAAGGAATC TATGATGAGTTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGGTAGTTGGTGATCCTTTTGATCCTAAAGTTCAACA AGGGCCTCAGGTATGAACATAGCAGCACAAAGTGTAAAATTGTTTGTTTTTTAAAACCCGCCAACTACTAGATTTCAAGC ATTGTACTTGGTTGTATGTATATAAAAAAAAAAGACTAGTTATTATAATCCTCCTCTGTTGGCTAAGAGTTTCTTCCTGT TTCAGGTTGACAAAAAGCAATTTGAAAAAATACTTTCTTATATTGAGCATGGAAAAAGAGAAGGGGCTACCCTTTTGACA GGGGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTTAAGGTGAATTGTAATTCCAC AAAGGATAAAAATGTTCTGTCTCCAAATAGTGTCTCAATTTTCTGTTCCACCAATGAAATCTCGTCATTTCAATTAAAAA GACGTCATGGGGCAGTTACAAACTTGCATAATTATTTTTAATCGACATATATTAGTGAGATAGAGAATGAGACAGGGGAC AAATTATTTCAATCCCCTTTTAGCATATATTTCAGATGACTAACCATCACATTCTCTTTTCCTTTCTATTCATTATAACC TGTTTTTAGGAGGACATGCTTATAGTTCAGGATGAAATATTTGGCCCTGTGATGGCCCTGAAGAAGTTTAAGTAAGTCCT ACTCCTAATTCTATTTATTATTATTACTATTGTAGTCTGATAACTATTGGTACCATTAATTTTATTTTATTTTGCTGATT TTGTTCATGAATACTAAATTCAATGATGAAAAATGAAAAACAGGACTATAGAAGAAGGAATTAAAAGTGCCAACAATACC AGATATGGTCTAGCAGCAGGCATTGTGACCAAGAGCTTGGATACAGCAAACACTGTGTCAAGGTCCATTCGTGCAGGCGT TGTTTGGATAAACTGCTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGTTACAAGATGAGTGGATTTGGAAGAGATT TTGGATTGGAAGCACTACACAAGTATCTACAAGTTAAATCTGTTGTGACTCCCATTTACAATTCTCCTTGGCTTTGA
CDS sequence (LotjaGi2g1v0214500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTGGTTTGATAATCAGGAAAGAGGAAGAATTATGATGAAATGGGCAGAGCTAATTGATCAAAACATAGAAGAAAT AGCAGCACTAGATGCCATTGATGCTGGAAAGTTATTCCAATGGTGTAAGAACGTTGACATTCCTGGAGCAGCAAACACTA TACGGTACTATGCTGGTGCTGCTGATAAAATTCATGGTGAGGTGTTGAAACATTCTCGGGAGATGCATGCGTATACTCTA TTAGAACCAATTGGTGTTGTGGGACACATCATTCCCTGGAACTTCCCTAGCACCATGTTTGTTGCCAAGGTTGGTCCTTC CTTAGCTGCTGGTTGCACAATGGTTCTCAAGCCTGCTGAACAAACACCACTTTCAGCTTTGTTTTATGCTCATTTAGCTA AGCAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTGCCCGGATTCGGTCACACTGCAGGTGCTGCAATAAGCTCTCAC ATGGACATTGATAAGGTCAGCTTCACTGGTTCAACAGAAGTAGGCAGACAAGTAATGCAAGCTGCTGCTAAGAGTAATTT GAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTTGTAATCTTTGATGATGCTGATGTGGATAAAGCTGCTGAGC TTGCTCTCTTGGGCATTCTATTTAACAAGGGAGAAATTTGTGTTGCCGGCTCCCGTGTATTTGTTCAGGAAGGAATCTAT GATGAGTTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGGTAGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGG GCCTCAGGTTGACAAAAAGCAATTTGAAAAAATACTTTCTTATATTGAGCATGGAAAAAGAGAAGGGGCTACCCTTTTGA CAGGGGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTTAAGGAGGACATGCTTATA GTTCAGGATGAAATATTTGGCCCTGTGATGGCCCTGAAGAAGTTTAAGACTATAGAAGAAGGAATTAAAAGTGCCAACAA TACCAGATATGGTCTAGCAGCAGGCATTGTGACCAAGAGCTTGGATACAGCAAACACTGTGTCAAGGTCCATTCGTGCAG GCGTTGTTTGGATAAACTGCTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGTTACAAGATGAGTGGATTTGGAAGA GATTTTGGATTGGAAGCACTACACAAGTATCTACAAGTTAAATCTGTTGTGACTCCCATTTACAATTCTCCTTGGCTTTG A
Protein sequence (LotjaGi2g1v0214500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKWFDNQERGRIMMKWAELIDQNIEEIAALDAIDAGKLFQWCKNVDIPGAANTIRYYAGAADKIHGEVLKHSREMHAYTL LEPIGVVGHIIPWNFPSTMFVAKVGPSLAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGHTAGAAISSH MDIDKVSFTGSTEVGRQVMQAAAKSNLKPVSLELGGKSPLVIFDDADVDKAAELALLGILFNKGEICVAGSRVFVQEGIY DEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLI VQDEIFGPVMALKKFKTIEEGIKSANNTRYGLAAGIVTKSLDTANTVSRSIRAGVVWINCYFAFGNDIPYGGYKMSGFGR DFGLEALHKYLQVKSVVTPIYNSPWL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SUPERFAMILY | 5 | 422 | 418 | 1.83E-155 | ||
PANTHER | 6 | 426 | 421 | 1.7E-270 | – | |
PANTHER | 6 | 426 | 421 | 1.7E-270 | – | |
Pfam | 6 | 416 | 411 | 1.0E-162 | ||
Gene3D | 6 | 415 | 410 | 7.8E-175 | ||
ProSitePatterns | 192 | 199 | 8 | - | ||
Gene3D | 196 | 385 | 190 | 7.8E-175 | ||
ProSitePatterns | 220 | 231 | 12 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
Molecular function | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0214500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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