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LotjaGi2g1v0214500.2

Overview

Field Value
Gene ID LotjaGi2g1v0214500
Transcript ID LotjaGi2g1v0214500.2
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|K7L0H3|K7L0H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:66469730..66473566) extracted from Lotus japonicus Gifu genome v1.2.

ATTGACATGAAGTGGTTTGATAATCAGGAAAGAGGAAGAATTATGATGAAATGGGCAGAGCTAATTGATCAAAACATAGA AGAAATAGCAGCACTAGATGCCATTGATGCTGGAAAGTTATTCCAATGGTGTAAGAACGTTGACATTCCTGGAGCAGCAA ACACTATACGGTACTATGCTGGTGCTGCTGATAAAATTCATGGTGAGGTGTTGAAACATTCTCGGGAGATGCATGCGTAT ACTCTATTAGAACCAATTGGTGTTGTGGGACACATCATTCCCTGGAACTTCCCTAGCACCATGTTTGTTGCCAAGGTTGG TCCTTCCTTAGCTGCTGGTTGCACAATGGTTCTCAAGCCTGCTGAACAAACACCACTTTCAGCTTTGTTTTATGCTCATT TAGCTAAGCAGGTATGTCTCCAACAAATGCTTCATATTTCCTTATCAATCATAATTGACTTTCACGAGTTAGAGGGTGTC CGGATACTAGTTGAGTGTAAGATGAATAGACTTTCATTTTCCATTCACTTTTTATCTCGAAGTGAATGTTAATGTCTGTT TACACTAGCGCTAACATGTATCCAAACATAGCCTTAACTGCTTGGGGCAAAGCTGAATATTGGTTTTGCTTGTTTTTATC TTTTGAAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTGCCCGGATTCGGTCACACTGCAGGTGCTGCAATAAGCTCT CACATGGACATTGATAAGGTAACTCAAATGCCGATTATTAGAATTCGAGTTAGGCATAACTCGAATTTGGGTTAGTGATA ATTCCTAGGCAAGTGTACCTATTCGTTAAGTAGTAATAAATTATCGAACTCAAGGATTGCGATCGTCTAAAGCAATTTAA CTTATTAAATAACTAAAAAGACTAAGGAAAAAGGTTTGGGGATGGATAATTGTTGTTGAAACGAACTTAATTAATTGCAA AGTAAAGTGAAAAGCAAGTACGTAGTATTGAAAACAATCAAAAGGGGAAGTACCTGGGGTAGGATTTCATCAATTTCACT TATGTTCTTAATAGACTAATTAACTCATGAATTATCTAACTTATTTATGGTGCTTGCCTAAGTTTCTACGTGATAATCTC TTAACTACGTAGAACTTCCAATTAAACTACTAACACTAATCTCTTAGTTCCTAGACGAATTTAATTGGAGAATTAAAACA CTTAGTTACTAGCCAACACAATTAGAAGTTACCCTTATCTCTAAGGCGTAGGCGTTCCTAATCAATTCCTCACCGGATCC ATATTTTATACCGATTTCTCAATCGCATACAAAATAGCAAATTAAGTTAATCTTCATGCATAAAGATTCATAGATAAAAG ATGAGAAATTCATAAATAAAAATAGGATTCATGAGTCTAAAAAGTATATCAAAACATAAGATCAAAAGAGTCAAATCAGA CACTCCAAGTACCTACGGAGGTTTAGCCAAGCATGACTTCCATGATCAAATAATTTATTGAAATAAAAAGGTTCTTCAAA AAGCTTCAAGTGCTAGGGTTAACTCCAGGAAAAAACTCAAAAACGGCTGCTGCTCTCAATACTGATCCCGTTTTTCTCCT CTGGTTCCAATATATATATTTCCGTTTCTTTCATTCCGTTTTCGTCTTTATCCCAAGTACAATCTGTTTTCAATCACGTG ATCACCTTTTCTGTAGATTTTGCTTTTGGTCCAACTCTTGCCACGTGTCGCGTTGTAATTGGACCGAACTTTAAGTGTGT ATTCCAGTACTTCGCGCACCACCATTCTTATGGTAGCCCTTCGTCATGATTGTAGCACATGGCAAAGAAGAAAACACCAA CCGTTGGATCCACGCAGGTGCATGGTAAATTCCATGGAACAGCAGCGCCGGATCAGCTCCATTTTCCTGATTTTCTCTTT TCCTTTTATTCTGAAAATCCTAAAAAGATAAAATAAATTAAAATAAATATTAAAAAGATAATAACTCAAAATAAAACATA TCAACTAAAAATAAAATAACTTAAATCCTAATAAATCAAAATAAAAATCATAAAAATATATAAAAATACTAAAAACCACA TAAAAATAGTAAAATGCATGGAATAATCATGAAGTGACCTAAAATGACCAAAATATCCTAAATAATATGCCAAAATGCAT GGAAATAAACTAGAAAAATAGCTTAAACACTCGGGTCATCAGTTAGGCTCTAATATCATATTAGAATTCGGGTTAGGCAT AACTCTACTCCAAAAATTCGTTTAAAAGTGTGGATTGCTCTACTCTTTATAAGGATCTATCAAGCCATACCTGTGGTCAA CAAGGAACCTTAATACCAATCATTTGGAAGTACCTTTGATTTAAAGTAAAACTAACAGAATTTTCTTGATTGTGTATATG TAGGTCAGCTTCACTGGTTCAACAGAAGTAGGCAGACAAGTAATGCAAGCTGCTGCTAAGAGTAATTTGAAACCAGTTTC ACTTGAATTAGGAGGCAAGTCACCCCTTGTAATCTTTGATGATGCTGATGTGGATAAAGCTGCTGAGCTTGCTCTCTTGG GCATTCTATTTAACAAGGTGAAGTTTTTTTCATGAAATCCAAATCTTTATTACAAATTATAAGCCCAATTATGAATTCTC TAACAATCTTTTATATACTTGTTTGATTTCAGGGAGAAATTTGTGTTGCCGGCTCCCGTGTATTTGTTCAGGAAGGAATC TATGATGAGTTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGGTAGTTGGTGATCCTTTTGATCCTAAAGTTCAACA AGGGCCTCAGGTATGAACATAGCAGCACAAAGTGTAAAATTGTTTGTTTTTTAAAACCCGCCAACTACTAGATTTCAAGC ATTGTACTTGGTTGTATGTATATAAAAAAAAAAGACTAGTTATTATAATCCTCCTCTGTTGGCTAAGAGTTTCTTCCTGT TTCAGGTTGACAAAAAGCAATTTGAAAAAATACTTTCTTATATTGAGCATGGAAAAAGAGAAGGGGCTACCCTTTTGACA GGGGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTTAAGGTGAATTGTAATTCCAC AAAGGATAAAAATGTTCTGTCTCCAAATAGTGTCTCAATTTTCTGTTCCACCAATGAAATCTCGTCATTTCAATTAAAAA GACGTCATGGGGCAGTTACAAACTTGCATAATTATTTTTAATCGACATATATTAGTGAGATAGAGAATGAGACAGGGGAC AAATTATTTCAATCCCCTTTTAGCATATATTTCAGATGACTAACCATCACATTCTCTTTTCCTTTCTATTCATTATAACC TGTTTTTAGGAGGACATGCTTATAGTTCAGGATGAAATATTTGGCCCTGTGATGGCCCTGAAGAAGTTTAAGTAAGTCCT ACTCCTAATTCTATTTATTATTATTACTATTGTAGTCTGATAACTATTGGTACCATTAATTTTATTTTATTTTGCTGATT TTGTTCATGAATACTAAATTCAATGATGAAAAATGAAAAACAGGACTATAGAAGAAGGAATTAAAAGTGCCAACAATACC AGATATGGTCTAGCAGCAGGCATTGTGACCAAGAGCTTGGATACAGCAAACACTGTGTCAAGGTCCATTCGTGCAGGCGT TGTTTGGATAAACTGCTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGTTACAAGATGAGTGGATTTGGAAGAGATT TTGGATTGGAAGCACTACACAAGTATCTACAAGTTAAATCTGTTGTGACTCCCATTTACAATTCTCCTTGGCTTTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0214500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGTGGTTTGATAATCAGGAAAGAGGAAGAATTATGATGAAATGGGCAGAGCTAATTGATCAAAACATAGAAGAAAT AGCAGCACTAGATGCCATTGATGCTGGAAAGTTATTCCAATGGTGTAAGAACGTTGACATTCCTGGAGCAGCAAACACTA TACGGTACTATGCTGGTGCTGCTGATAAAATTCATGGTGAGGTGTTGAAACATTCTCGGGAGATGCATGCGTATACTCTA TTAGAACCAATTGGTGTTGTGGGACACATCATTCCCTGGAACTTCCCTAGCACCATGTTTGTTGCCAAGGTTGGTCCTTC CTTAGCTGCTGGTTGCACAATGGTTCTCAAGCCTGCTGAACAAACACCACTTTCAGCTTTGTTTTATGCTCATTTAGCTA AGCAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTGCCCGGATTCGGTCACACTGCAGGTGCTGCAATAAGCTCTCAC ATGGACATTGATAAGGTCAGCTTCACTGGTTCAACAGAAGTAGGCAGACAAGTAATGCAAGCTGCTGCTAAGAGTAATTT GAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTTGTAATCTTTGATGATGCTGATGTGGATAAAGCTGCTGAGC TTGCTCTCTTGGGCATTCTATTTAACAAGGGAGAAATTTGTGTTGCCGGCTCCCGTGTATTTGTTCAGGAAGGAATCTAT GATGAGTTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGGTAGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGG GCCTCAGGTTGACAAAAAGCAATTTGAAAAAATACTTTCTTATATTGAGCATGGAAAAAGAGAAGGGGCTACCCTTTTGA CAGGGGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTTAAGGAGGACATGCTTATA GTTCAGGATGAAATATTTGGCCCTGTGATGGCCCTGAAGAAGTTTAAGACTATAGAAGAAGGAATTAAAAGTGCCAACAA TACCAGATATGGTCTAGCAGCAGGCATTGTGACCAAGAGCTTGGATACAGCAAACACTGTGTCAAGGTCCATTCGTGCAG GCGTTGTTTGGATAAACTGCTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGTTACAAGATGAGTGGATTTGGAAGA GATTTTGGATTGGAAGCACTACACAAGTATCTACAAGTTAAATCTGTTGTGACTCCCATTTACAATTCTCCTTGGCTTTG A
Download CDS Sequence

Protein sequence (LotjaGi2g1v0214500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKWFDNQERGRIMMKWAELIDQNIEEIAALDAIDAGKLFQWCKNVDIPGAANTIRYYAGAADKIHGEVLKHSREMHAYTL LEPIGVVGHIIPWNFPSTMFVAKVGPSLAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGHTAGAAISSH MDIDKVSFTGSTEVGRQVMQAAAKSNLKPVSLELGGKSPLVIFDDADVDKAAELALLGILFNKGEICVAGSRVFVQEGIY DEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLI VQDEIFGPVMALKKFKTIEEGIKSANNTRYGLAAGIVTKSLDTANTVSRSIRAGVVWINCYFAFGNDIPYGGYKMSGFGR DFGLEALHKYLQVKSVVTPIYNSPWL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF53720
5 422 418 1.83E-155
IPR016161
PANTHER
PTHR11699
6 426 421 1.7E-270 –
PANTHER
PTHR11699:SF284
6 426 421 1.7E-270 –
Pfam
PF00171
6 416 411 1.0E-162
IPR015590
Gene3D
G3DSA:3.40.605.10
6 415 410 7.8E-175
IPR016162
ProSitePatterns
PS00687
192 199 8 -
IPR029510
Gene3D
G3DSA:3.40.309.10
196 385 190 7.8E-175
IPR016163
ProSitePatterns
PS00070
220 231 12 -
IPR016160

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0214500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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