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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR11699
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 65 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.032s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0015969.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform X2 [Cicer arietinum] gi|502135874|ref|XP_004502483.1| chr0 6224871 6225793 +
1 domain prediction
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Lj0g3v0133709.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] gi|356497822|ref|XP_003517756.1| chr0 61231409 61235100 -
1 domain prediction
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Lj0g3v0215059.1
n.a. Aldehyde dehydrogenase [Medicago truncatula] gi|357518719|ref|XP_003629648.1| chr0 108961673 108965842 +
1 domain prediction
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Lj0g3v0274549.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356557707|ref|XP_003547154.1| chr0 142336542 142340918 -
1 domain prediction
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Lj0g3v0274549.2
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356557707|ref|XP_003547154.1| chr0 142336542 142340918 -
1 domain prediction
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Lj0g3v0286699.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform X1 [Cicer arietinum] gi|502124011|ref|XP_004498346.1| chr0 148943375 148953155 +
1 domain prediction
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Lj0g3v0286699.2
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max] gi|356552695|ref|XP_003544698.1| chr0 148947812 148952614 +
1 domain prediction
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Lj0g3v0286699.3
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max] gi|356552695|ref|XP_003544698.1| chr0 148947812 148953155 +
1 domain prediction
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Lj0g3v0299699.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356502944|ref|XP_003520274.1| chr0 155706590 155710388 +
1 domain prediction
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Lj0g3v0350589.1
n.a. PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [Glycine max] gi|356562585|ref|XP_003549550.1| chr0 184273776 184277873 +
1 domain prediction
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Lj1g3v0838120.1
n.a. Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|357463521|ref|XP_003602042.1| chr1 10799127 10804016 -
1 domain prediction
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Lj1g3v1306830.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Glycine max] gi|356526936|ref|XP_003532071.1| chr1 15737206 15741546 -
1 domain prediction
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Lj2g3v0777150.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] gi|356520525|ref|XP_003528912.1| chr2 12283581 12293154 -
1 domain prediction
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Lj2g3v0777190.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] gi|356520527|ref|XP_003528913.1| chr2 12321393 12325532 +
1 domain prediction
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Lj2g3v1014560.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] gi|356548623|ref|XP_003542700.1| chr2 15671829 15675165 -
1 domain prediction
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Lj2g3v1014560.2
n.a. PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] gi|356548623|ref|XP_003542700.1| chr2 15671829 15675165 -
1 domain prediction
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Lj3g3v0948280.2
n.a. PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Cicer arietinum] gi|502087490|ref|XP_004488550.1| chr3 11621261 11635962 -
1 domain prediction
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Lj3g3v3237960.2
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Cicer arietinum] gi|502148255|ref|XP_004507095.1| chr3 39943483 39946906 +
1 domain prediction
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Lj3g3v3237970.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356542009|ref|XP_003539464.1| chr3 39948155 39948917 +
1 domain prediction
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Lj3g3v3237980.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356557707|ref|XP_003547154.1| chr3 39948864 39952870 +
1 domain prediction
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Lj4g3v0388250.1
n.a. PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating] gi|356521227|ref|XP_003529258.1| chr4 5080918 5087263 -
1 domain prediction
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Lj4g3v1534920.1
n.a. aldehyde dehydrogenase 1 precursor [Lotus corniculatus] gi|29373073|gb|AAO72532.1| chr4 22913803 22921405 -
1 domain prediction
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Lj4g3v1534920.2
n.a. aldehyde dehydrogenase 1 precursor [Lotus corniculatus] gi|29373073|gb|AAO72532.1| chr4 22919668 22923760 -
1 domain prediction
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Lj4g3v1561610.1
n.a. Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2)gi|284055631|pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2)gi|206715496|emb|CAC48393.2| aminoaldehyde dehydrogenase [Pisum sativum] gi|284055630|pdb|3IWJ|A chr4 23233173 23237477 +
1 domain prediction
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Lj4g3v1614820.1
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like [Glycine max] gi|356562816|ref|XP_003549664.1| chr4 23796407 23804687 -
1 domain prediction
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Lj4g3v1614820.2
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like [Glycine max] gi|356562816|ref|XP_003549664.1| chr4 23797565 23804687 -
1 domain prediction
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Lj4g3v2139940.1
n.a. PREDICTED: LOW QUALITY PROTEIN: aldehyde dehydrogenase family 7 member A1-like [Brachypodium distachyon] gi|357158604|ref|XP_003578181.1| chr4 29525021 29530730 -
1 domain prediction
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Lj4g3v2267580.2
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] gi|356521770|ref|XP_003529524.1| chr4 31614249 31622240 -
1 domain prediction
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Lj4g3v2827880.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Glycine max] gi|356526936|ref|XP_003532071.1| chr4 37932977 37937174 -
1 domain prediction
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Lj5g3v0511010.1
n.a. PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [Glycine max] gi|356563928|ref|XP_003550209.1| chr5 5426462 5434213 -
1 domain prediction
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Lj6g3v1177340.1
n.a. PREDICTED: aldehyde dehydrogenase family 7 member A1-like [Glycine max] gi|356556396|ref|XP_003546512.1| chr6 14436578 14440774 -
1 domain prediction
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Lj6g3v1904500.1
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Cicer arietinum] gi|502084770|ref|XP_004487758.1| chr6 21368712 21371716 -
1 domain prediction
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Lj6g3v1904510.1
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Cicer arietinum] gi|502084770|ref|XP_004487758.1| chr6 21372749 21375202 -
1 domain prediction
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Lj6g3v1915890.1
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Cicer arietinum] gi|502084770|ref|XP_004487758.1| chr6 21556804 21562398 -
1 domain prediction
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Lj6g3v2192260.1
n.a. PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating] gi|356524788|ref|XP_003531010.1| chr6 25301907 25308478 +
1 domain prediction
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LotjaGi2g1v0214500.1
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|I1KIS3|I1KIS3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500 LjG1.1_chr2 66468735 66479454 -
1 domain prediction
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LotjaGi2g1v0214500.2
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|K7L0H3|K7L0H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500 LjG1.1_chr2 66469730 66473566 -
1 domain prediction
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LotjaGi2g1v0214500.3
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|I1KIS3|I1KIS3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500 LjG1.1_chr2 66469730 66477563 -
1 domain prediction
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LotjaGi2g1v0214500.4
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|I1KIS3|I1KIS3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500 LjG1.1_chr2 66469730 66477569 -
1 domain prediction
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LotjaGi2g1v0214500.5
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|I1KIS3|I1KIS3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500 LjG1.1_chr2 66469730 66477632 -
1 domain prediction
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LotjaGi2g1v0214500.6
n.a. Aldehyde dehydrogenase family protein; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|K7L0H3|K7L0H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214500 LjG1.1_chr2 66470132 66473575 -
1 domain prediction
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LotjaGi2g1v0214700.1
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|A0A0S3TCF7|A0A0S3TCF7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214700 LjG1.1_chr2 66507517 66511544 +
1 domain prediction
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LotjaGi2g1v0214700.2
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|A0A0S3TCF7|A0A0S3TCF7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214700 LjG1.1_chr2 66507636 66511443 +
1 domain prediction
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LotjaGi2g1v0248800.1
n.a. Aldehyde dehydrogenase; TAIR: AT1G23800.1 aldehyde dehydrogenase 2B7; Swiss-Prot: sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial; TrEMBL-Plants: tr|K7M095|K7M095_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0248800 LjG1.1_chr2 71436478 71440855 -
1 domain prediction
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LotjaGi2g1v0248800.2
n.a. Aldehyde dehydrogenase; TAIR: AT1G23800.1 aldehyde dehydrogenase 2B7; Swiss-Prot: sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial; TrEMBL-Plants: tr|I1M026|I1M026_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0248800 LjG1.1_chr2 71436629 71440948 -
1 domain prediction
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LotjaGi4g1v0164600.1
n.a. Aldehyde dehydrogenase; TAIR: AT1G23800.1 aldehyde dehydrogenase 2B7; Swiss-Prot: sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial; TrEMBL-Plants: tr|A0A151SJB7|A0A151SJB7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0164600 LjG1.1_chr4 31006697 31010645 -
1 domain prediction
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LotjaGi4g1v0164600.2
n.a. Aldehyde dehydrogenase; TAIR: AT1G23800.1 aldehyde dehydrogenase 2B7; Swiss-Prot: sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial; TrEMBL-Plants: tr|A0A072U2G7|A0A072U2G7_MEDTR NAD-dependent aldehyde dehydrogenase family protein; Found in the gene: LotjaGi4g1v0164600 LjG1.1_chr4 31007236 31010010 -
1 domain prediction
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LotjaGi4g1v0164600.3
n.a. Aldehyde dehydrogenase; TAIR: AT1G23800.1 aldehyde dehydrogenase 2B7; Swiss-Prot: sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial; TrEMBL-Plants: tr|A0A072U2G7|A0A072U2G7_MEDTR NAD-dependent aldehyde dehydrogenase family protein; Found in the gene: LotjaGi4g1v0164600 LjG1.1_chr4 31007236 31010078 -
1 domain prediction
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LotjaGi4g1v0236100.1
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G48000.1 aldehyde dehydrogenase 2B4; Swiss-Prot: sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial; TrEMBL-Plants: tr|I3SLS5|I3SLS5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0236100 LjG1.1_chr4 55073801 55078158 -
1 domain prediction
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LotjaGi4g1v0236100.2
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G48000.1 aldehyde dehydrogenase 2B4; Swiss-Prot: sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial; TrEMBL-Plants: tr|I3SLS5|I3SLS5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0236100 LjG1.1_chr4 55074178 55077969 -
1 domain prediction
 –