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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0235600 |
Transcript ID | LotjaGi2g1v0235600.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT4G31170.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|I3SU06|I3SU06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0235600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:69559887..69563336) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTGGAAGGTGGTGCGAAATTCCCTGGAATGATAGACCTCAACAAAACTAATAATAACATTTATGATTTCTCTCAAGG CTTTTACCATAAGCTTGAGGACACCAATATGTCAATTGACAGCTTGCAAACAAGTAATGGTGGTGGATCTGTTGCAATGT CTGTTGATAATAGCAGTGTTGGATCCAATGATTCCCATACTCGTATATTGAATCACCAAGGGTTGAAGAGGCATGCCCAT GATAACTACTCTGTTGCACACAGTGTCAATCACCGAGGAAGAGTCACGCATGCTTTGAGTGGTGATGCTCTGGCTCAAGC TCTAATGGACAGTAATAGCCCCACTGAGGGGCTTGACAATTTTCATGAGTGGACAATTGATCTGAGGAACCTTAGTATGG GTGAGGCTTTTGCTCAAGGAGCTTTTGGGAAACTGTACAGAGGTACGTACAACAATGAAGAAGTTGCTATCAAAATCTTG GAGAGGCCTGAAAATGATCTGGCAAAGGCTCAATTGATGGAACAACAGTTTCAGCAGGAGGTCATGATGCTGGCTACACT AAAGCACCCTAACATAGTTCGTTTTATTGGTGCATGCCGTAAGCCAATGGTGTGGTGCATTGTTACAGAGTATGCCAAAG GGGGTTCAGTTCGACAGTTTTTAATGAAGCGTCAAAACCGAGCAGTCCCTCTCAAGCTGGCTGTCAAACAAGCTTTGGAT GTTGCAAGAGGGATGGCATATGTTCATGGGCTTGGGTTGATCCATAGAGACTTGAAGTCCGATAATCTTCTGATTTTTGG TGACAAATCAATTAAAATTGCTGACTTTGGAGTGGCGCGGATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGGA CATACCGTTGGATGGCTCCGTAAGATTCTTTGTTTTCCTTTTTACTTTTGATATTAATTTTAATGTGCATACTGGTTTTA TTATGCTTCTTTTATCTTGTCTTAATAATGCTGGACATCTCAACGAAGGAAAGATTATTATTGAAATTTTAAATGATGCT AACAGACAATTAATAGGGAGTCCCCTTATCAATATTATCTTTTTGTTATTCATGATCCTGTTGCAGAAATGGCATATACT GCTGAAATAGGAATCTATTAATCCCTGATTAGTTGTATATTTTTAATGTGCAGCATTCATTTCTACTTCCAGTCTTATTT ATAGGCACTAGTTAATTCTTTTCTTTTGTTGTTTCAAATTTTCAGTTTTAGAAAATTGTTTGTTGCCAGAATACTTTAGG ACATAAACTCATTTATCACATTTTTACATTGTCTTCTTGTCTTTTAACTATTTTGCTCTTCTTTTGACTTAGATATGTTT TGGTTGAGAACTGATGAGTTCAATTGGATGATGGCGGTGTCAATATTTTTCTCATCTATTCCGGTTTTTGTTTTTGGCTC CTTCCACCCCATATTCATTGATTGGAAAATTACACACACATAACAATTGATTGTACTGACGTGGGAGATTTTTTTCAGTT AGAAAATGTATTTTCACATGTTTTCAGTGACTCGATGTATTTTTGCAATCTTGTACATGGTGGAATACACACTTTTGGCT AGTAACTAACCCCTATCAGGATTCATGATACTAAAGATTCTGATAGTAGATCATGGGTAGTTTTTAATTTTCTTTTTAGA CTGGTTAAGAATAAAATTCACTTCTCTGCTAGGTATTTGTAGCTGCCAATATACTTCTGGTATCCTCAAGTGATGCTTAG CCTATTGCACATTCATCATACATACCCAATATCCAGACATATTGTTTCAATGTTAAAACTCCGTTTTGAATATCTGATCA TATTCTATTGCATCTCTTCTGTTCATAAGCATCTAGCGTTCTAGATACTATCTTGTTTTCGTGGATGATGTTCAGTGCAT GATGTCAATCAAATGTTGGGTTTATGTTGCATTCTCACTATTGTCACAGTGGCCAAAATACTTGTTAGATCATAGAGTTG TACATTTCCACTAGTTTTACTTGCAGCTACCATCCTTTTCACCGCCAAAAACCATCTTTTGAATCTGATGAGATTGTCTG AGATCGCTGCTGGCTTAGTTGTCCATTTCTGAATGCCCAAGCCTACCTGAAATCTTAAGTCCCCAAGCCCTACAAACACT TCTTTTTCCTTTGACCCTTCACTGTACTACCTATCGTCTTCCTTGAGCTTTGCTCTGTGGGTTCTGAGCTTTGATCTGTG GCTGTTAGGGGTTGTGCCTATTGGTGATGGTTACACGAAAGAGAGTCCTAGTGATGGGTTGGGTTAAAGAGAGGGTGGGT GTCGATTTGATCTCTTCCCTGGTTTGGTCTCCTTAAGTCCTCATTCTTCCTTCCCTTCGAGTTGGGATGATGCTTTACTG CTTCGCTGGTTTGTTATTTGCTCTTGGCTTTGTTTTATTCTACAGTCTAATGTTTTCTGACTCTGTTTTACGTTCGAGGG CTTGTTTGGTTTTCATTTTCACTTTCTGATTCCTGTTTTCAATTTTAAGTACAAGAATTTCACTTTTTCATTTGGTTCCT TTTTCAAGTTTTTTATAGAAAAATCATAAAAATAATATGAAAAAAAATTAATTGAAGGGGGTTTTCTGGGTAAATCCTTA ACCCTTATACTTAAATTGTGGTGTGGTTGTTTTATGGATTCTTCTTTGCTTCTCTTCAATTGGTTACTTAATGAAACTTC CTTGTTAGATATCTCTTTTCTCTTTCTAATAGTAATCCTTCTATTTAATGAAAACTGAAAGGCCCTTTTTGCTGTCCATC TTTTGTCAATACTAGCTATCCTAGATATATAATACATTTAGTTGAGAAACCATTGGTTGATATATATGAGTAGTTACATT TTCTAGTTGTGCCTAATCATGTCTGCATAACTGAGCATGCTTTTGTATGTTTCTGCTACCCCCAAAATCCAGTTGATGAT ATAACCTATGTAATTAAGATGAACCTGCTTGTTTAAAGTGCTAAAGTGCATAGTATGTTTCACTATTTCATTTTTTTTTA TTTAAAAAAAAATGCATATCTTTATGTGCTACTTGATTATGTTTTCCCCCCTCTTTATTATCTGTTGCAGGGAAATGATC CAGCATAGGCCTTACACCCAAAAAGTGGATGTATATAGCTTTGGGATTGTTCTATGGGAATTGATCACTGGAATGCTTCC ATTTCAGAACATGACAGCAGTGCAGGCAGCATTTGCAGTCGTGAACAAAAATGTTCGCCCAATCGTCCCCAATGACTGCT TACCTGTTCTTCGTGAGATCATGACAAGGTGCTGGGATCCCAACCCTGATGTCAGGCCACCGTTCGCTGAAATTGTAGAG ATGCTTGAGAACGCCCAGACTGAGATCATGATGACTGTTCGGAAGGCCCGTTTCAGGTGTTGCATGACCCAGCCAATGAC CACTGACTGA
CDS sequence (LotjaGi2g1v0235600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGAAGGTGGTGCGAAATTCCCTGGAATGATAGACCTCAACAAAACTAATAATAACATTTATGATTTCTCTCAAGG CTTTTACCATAAGCTTGAGGACACCAATATGTCAATTGACAGCTTGCAAACAAGTAATGGTGGTGGATCTGTTGCAATGT CTGTTGATAATAGCAGTGTTGGATCCAATGATTCCCATACTCGTATATTGAATCACCAAGGGTTGAAGAGGCATGCCCAT GATAACTACTCTGTTGCACACAGTGTCAATCACCGAGGAAGAGTCACGCATGCTTTGAGTGGTGATGCTCTGGCTCAAGC TCTAATGGACAGTAATAGCCCCACTGAGGGGCTTGACAATTTTCATGAGTGGACAATTGATCTGAGGAACCTTAGTATGG GTGAGGCTTTTGCTCAAGGAGCTTTTGGGAAACTGTACAGAGGTACGTACAACAATGAAGAAGTTGCTATCAAAATCTTG GAGAGGCCTGAAAATGATCTGGCAAAGGCTCAATTGATGGAACAACAGTTTCAGCAGGAGGTCATGATGCTGGCTACACT AAAGCACCCTAACATAGTTCGTTTTATTGGTGCATGCCGTAAGCCAATGGTGTGGTGCATTGTTACAGAGTATGCCAAAG GGGGTTCAGTTCGACAGTTTTTAATGAAGCGTCAAAACCGAGCAGTCCCTCTCAAGCTGGCTGTCAAACAAGCTTTGGAT GTTGCAAGAGGGATGGCATATGTTCATGGGCTTGGGTTGATCCATAGAGACTTGAAGTCCGATAATCTTCTGATTTTTGG TGACAAATCAATTAAAATTGCTGACTTTGGAGTGGCGCGGATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGGA CATACCGTTGGATGGCTCCGGAAATGATCCAGCATAGGCCTTACACCCAAAAAGTGGATAACATGACAGCAGTGCAGGCA GCATTTGCAGTCGTGAACAAAAATGTTCGCCCAATCGTCCCCAATGACTGCTTACCTGTTCTTCGTGAGATCATGACAAG GTGCTGGGATCCCAACCCTGATGTCAGGCCACCGTTCGCTGAAATTGTAGAGATGCTTGAGAACGCCCAGACTGAGATCA TGATGACTGTTCGGAAGGCCCGTTTCAGGTGTTGCATGACCCAGCCAATGACCACTGACTGA
Protein sequence (LotjaGi2g1v0235600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLEGGAKFPGMIDLNKTNNNIYDFSQGFYHKLEDTNMSIDSLQTSNGGGSVAMSVDNSSVGSNDSHTRILNHQGLKRHAH DNYSVAHSVNHRGRVTHALSGDALAQALMDSNSPTEGLDNFHEWTIDLRNLSMGEAFAQGAFGKLYRGTYNNEEVAIKIL ERPENDLAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRAVPLKLAVKQALD VARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDNMTAVQA AFAVVNKNVRPIVPNDCLPVLREIMTRCWDPNPDVRPPFAEIVEMLENAQTEIMMTVRKARFRCCMTQPMTTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 27 | 390 | 364 | 1.8E-189 | – | |
PANTHER | 27 | 390 | 364 | 1.8E-189 | – | |
SUPERFAMILY | 115 | 366 | 252 | 5.13E-65 | ||
Gene3D | 120 | 213 | 94 | 8.5E-27 | – | |
ProSiteProfiles | 131 | 393 | 263 | 33.375 | ||
SMART | 131 | 374 | 244 | 1.1E-36 | ||
CDD | 138 | 366 | 229 | 2.47347E-106 | – | |
Pfam | 139 | 313 | 175 | 7.1E-43 | ||
Gene3D | 214 | 313 | 100 | 7.0E-28 | – | |
ProSitePatterns | 253 | 265 | 13 | - | ||
Gene3D | 314 | 390 | 77 | 4.7E-9 | – | |
Pfam | 319 | 366 | 48 | 1.2E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0235600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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