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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001245
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 1129 results. Now displaying 1 of 23 with 50 rows per page. This search has taken 7.405s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1467920.1
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
2 domain predictions
2 GO terms
Lj2g3v1828350.1
LjNfr5 Nod-factor receptor 5 [Lotus japonicus] gi|37651074|emb|CAE02597.1| chr2 27399749 27402036 -
2 domain predictions
2 GO terms
Lj2g3v2904690.1
LjNfr1 Nod-factor receptor 1b [Lotus japonicus] gi|37651060|emb|CAE02590.1| chr2 37916948 37922957 +
2 domain predictions
2 GO terms
Lj3g3v3375770.1
LjHar1 hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| chr3 41520393 41525499 +
2 domain predictions
2 GO terms
Lj0g3v0002709.1
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356522867|ref|XP_003530064.1| chr0 894057 905814 +
2 domain predictions
2 GO terms
Lj0g3v0004239.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like isoform X1 [Cicer arietinum] gi|502158481|ref|XP_004511169.1| chr0 1486200 1495290 -
2 domain predictions
2 GO terms
Lj0g3v0004239.2
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like isoform X1 [Cicer arietinum] gi|502158481|ref|XP_004511169.1| chr0 1491342 1495290 -
2 domain predictions
2 GO terms
Lj0g3v0008839.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356517903|ref|XP_003527625.1| chr0 3594790 3597374 +
2 domain predictions
2 GO terms
Lj0g3v0009879.1
n.a. Kinase R-like protein [Medicago truncatula] gi|357438749|ref|XP_003589651.1| chr0 4084536 4084772 -
2 domain predictions
2 GO terms
Lj0g3v0009889.1
n.a. n.a. chr0 4084536 4084745 -
2 domain predictions
2 GO terms
Lj0g3v0010069.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 4105156 4105460 -
2 domain predictions
2 GO terms
Lj0g3v0024809.1
n.a. PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Cicer arietinum] gi|502143842|ref|XP_004505487.1| chr0 9870862 9892442 -
2 domain predictions
2 GO terms
Lj0g3v0042109.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514907|ref|XP_003526143.1| chr0 13847734 13849153 -
2 domain predictions
2 GO terms
Lj0g3v0055039.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr0 17639362 17641296 +
2 domain predictions
2 GO terms
Lj0g3v0055799.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK5-like [Glycine max] gi|356509567|ref|XP_003523519.1| chr0 18085830 18086582 +
2 domain predictions
2 GO terms
Lj0g3v0059499.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166662|ref|XP_004513950.1| chr0 19683288 19688507 +
2 domain predictions
2 GO terms
Lj0g3v0059509.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356545297|ref|XP_003541080.1| chr0 19690149 19694423 +
2 domain predictions
2 GO terms
Lj0g3v0059919.1
n.a. PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Cicer arietinum] gi|502082392|ref|XP_004487152.1| chr0 19889238 19906617 -
3 domain predictions
2 GO terms
Lj0g3v0060569.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Cicer arietinum] gi|502156240|ref|XP_004510376.1| chr0 20192211 20195123 +
2 domain predictions
2 GO terms
Lj0g3v0061859.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Cicer arietinum] gi|502152552|ref|XP_004508979.1| chr0 20771290 20775478 +
2 domain predictions
2 GO terms
Lj0g3v0067799.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 24129425 24131578 -
2 domain predictions
2 GO terms
Lj0g3v0067799.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 24129425 24131578 -
2 domain predictions
2 GO terms
Lj0g3v0067889.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max] gi|356521887|ref|XP_003529582.1| chr0 24185210 24190043 +
2 domain predictions
2 GO terms
Lj0g3v0070679.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357438781|ref|XP_003589667.1| chr0 25811146 25814698 -
2 domain predictions
2 GO terms
Lj0g3v0070679.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357438781|ref|XP_003589667.1| chr0 25811744 25814698 -
2 domain predictions
2 GO terms
Lj0g3v0070679.3
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357438781|ref|XP_003589667.1| chr0 25812952 25814698 -
2 domain predictions
2 GO terms
Lj0g3v0072519.1
n.a. PREDICTED: protein kinase APK1B, chloroplastic-like [Glycine max] gi|356506672|ref|XP_003522100.1| chr0 26909470 26914375 -
2 domain predictions
2 GO terms
Lj0g3v0073209.1
n.a. MAP/microtubule affinity-regulating kinase [Medicago truncatula] gi|357515927|ref|XP_003628252.1| chr0 27410480 27412917 +
2 domain predictions
2 GO terms
Lj0g3v0075369.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502135214|ref|XP_004502257.1| chr0 28565917 28573472 +
2 domain predictions
2 GO terms
Lj0g3v0078479.1
n.a. PREDICTED: receptor like protein kinase S.2-like [Glycine max] gi|356503214|ref|XP_003520406.1| chr0 30211687 30214919 -
2 domain predictions
2 GO terms
Lj0g3v0083519.1
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum] gi|502155065|ref|XP_004509947.1| chr0 33105730 33108989 +
2 domain predictions
2 GO terms
Lj0g3v0084029.1
n.a. PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase 2-like [Cicer arietinum] gi|502136069|ref|XP_004502549.1| chr0 33421371 33426989 +
2 domain predictions
2 GO terms
Lj0g3v0084889.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK12-like [Glycine max] gi|356524047|ref|XP_003530644.1| chr0 33875098 33875616 +
2 domain predictions
2 GO terms
Lj0g3v0086719.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 4-like [Glycine max] gi|356559929|ref|XP_003548248.1| chr0 35046088 35050220 -
2 domain predictions
2 GO terms
Lj0g3v0089589.1
n.a. PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270-like [Glycine max] gi|356541803|ref|XP_003539362.1| chr0 36788440 36791306 +
2 domain predictions
2 GO terms
Lj0g3v0090879.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356526520|ref|XP_003531865.1| chr0 37571261 37573702 +
2 domain predictions
2 GO terms
Lj0g3v0092529.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Glycine max] gi|356568429|ref|XP_003552413.1| chr0 38580316 38581785 +
2 domain predictions
2 GO terms
Lj0g3v0094019.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Glycine max] gi|356514951|ref|XP_003526165.1| chr0 39475657 39477039 -
2 domain predictions
2 GO terms
Lj0g3v0094389.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At1g50610-like [Cicer arietinum] gi|502089636|ref|XP_004488972.1| chr0 39688550 39691233 +
2 domain predictions
2 GO terms
Lj0g3v0095039.1
n.a. PREDICTED: PTI1-like tyrosine-protein kinase At3g15890-like [Glycine max] gi|356529320|ref|XP_003533243.1| chr0 40015742 40017467 +
2 domain predictions
2 GO terms
Lj0g3v0095039.2
n.a. PREDICTED: PTI1-like tyrosine-protein kinase At3g15890-like [Glycine max] gi|356529320|ref|XP_003533243.1| chr0 40015742 40017467 +
2 domain predictions
2 GO terms
Lj0g3v0096479.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347873|ref|XP_003637975.1| chr0 40687117 40695302 +
2 domain predictions
2 GO terms
Lj0g3v0106439.3
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770-like [Glycine max] gi|356523826|ref|XP_003530535.1| chr0 45775767 45777138 -
2 domain predictions
2 GO terms
Lj0g3v0107959.1
n.a. PREDICTED: probable serine/threonine-protein kinase At4g35230-like [Glycine max] gi|356511538|ref|XP_003524482.1| chr0 46596198 46602084 -
2 domain predictions
2 GO terms
Lj0g3v0110529.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] gi|356540452|ref|XP_003538703.1| chr0 47947649 47948986 -
2 domain predictions
2 GO terms
Lj0g3v0112879.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502166659|ref|XP_004513949.1| chr0 49268904 49272257 +
2 domain predictions
2 GO terms
Lj0g3v0115709.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356537708|ref|XP_003537367.1| chr0 50859370 50863385 +
2 domain predictions
2 GO terms
Lj0g3v0116419.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK4-like isoform X3 [Cicer arietinum] gi|502153183|ref|XP_004509247.1| chr0 51221672 51225411 +
2 domain predictions
2 GO terms
Lj0g3v0126939.1
n.a. protein kinase [Glycine max] gi|351726644|ref|NP_001235086.1| chr0 57196155 57198494 +
2 domain predictions
2 GO terms
Lj0g3v0130739.1
n.a. Kinase-like protein [Medicago truncatula] gi|357514029|ref|XP_003627303.1| chr0 59358855 59359466 -
2 domain predictions
2 GO terms