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LotjaGi2g1v0342500.3

Overview

Field Value
Gene ID LotjaGi2g1v0342500
Transcript ID LotjaGi2g1v0342500.3
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT4G19110.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6Z8C8|CDKF4_ORYSJ Cyclin-dependent kinase F-4; TrEMBL-Plants: tr|I1J828|I1J828_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0342500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:81972852..81979540) extracted from Lotus japonicus Gifu genome v1.2.

CTTGGCTGTCACGAACCACACCACATAGAGAGAGAAACAAAAAAAGCTAGAGAGAGAAACAAGGGTATCGTTTACGAACA ACAAGAAACTCTGGATTCCACCTCTTCCCGTCCTTCGAGACGGTGGTTACGCTGCTTGCTCTTCAGGTTCTCCTCTCTCC CTCCGCTTTTCACTCCAGATCCGATCCGATCGCTTTTCGATTCTTCTGATTTCGTTTTCGCAATCGCTTCCGCTCTGATT TCACGTTTTTTTCTGCTTATCTGATGATTTTCTTGCTTGATTGATGCTCTTACAATTGAATTAAATTGAATTAGGTTTTA GGCGTTGTTTTCTAGATTTCCATGGATTTGTGATATTTTTTGTGCTTTGGTATGAGTTAGAGTTTGGTGATGAGATTCTG TTGTGGTTGTTGTCATACTTGAACAATTTTCAGCTTCTGGAGCTTCATGTGTTGTGGTTTATGCATGATATTTTCATACT AACCGCCGTATATATTAACTTGTGGATTTTATCTGATGAATTGTTTCATAGAGCTGTATGTATGCAAATTGATTGCTGGA TTTTTATCTGCTTGTAGGTATATTAATTGTTCTAAGCAATTTTACTTGTTCAGGCTCTTAATTTCGGTTTGATTTTGTGT GATTCCAGTTTTTGTTGAGATTTTTATTATCCTGGTCATATTTCGTGTTTTGGTATGAGTTAGGGTTTGGATATGGATTC TGTTGTGGTGGTTGTCATAGTTGAACGATTTTCAGCTTCTGGAGCTTCATGTGGTGGCTGCTGCGATTGCATGATAATTT CATACTAACTGGCTAGATACTAACATGTGGATTTTATCTGATGAATTGTTACATAGAGCTGCATGTATGCAAATTAATTT CTGTAGTTTTAATTGCTTGTAAGTAAATTAGTTGTTGTAAGCAATTTTTCTTGTTCGCGCTCTTAATTGCTGTTTTGTTG AGATATTTATTCTCCTGGTCATATTTTTATGGGAAGCGGATTGAATGTTTGAAATTTTGGATAAATAATCTTACATTGAT CTTGGTCTATGTTTTTTTTGGTTGCAGGCTGGTCTGGGTTTGAATCTAAAAGGTTGTGATTTGTATCTCGAGACATGGAG GGAGTTTGTTTCTCAACAAATGGCTACCAGTTTCTGTTTTTTGCATTCCAAGAAGTGCTTGATTGGCGGTTTTTCATCCT TGGAAATTTCCTTCCGGTTTCCTTTGTTAATTGCACTTAGTGTTCTGTTCCTCGTTAATGATCAGCACAGGGTGCGTGAT GCTAGTTTCTTCTGATACAGGTGCTGCATCTTTAGTGCACTTATGCAAGTAAGCGCTTTTTTTTAATTATCTATGCAGAA CACTAATTGAAAAACTAGTTCATTGATAAGTGCTCCTTTGACAGTGCATTGCTGACCCAACATTCAGTTATATCCTCTGG TAAATCCTCTTCTGGGGTAAGATATCTATCTTAGAGAACCTCCAACATTATTGTCTATTTCAGTTTGCTAAAATTTAACT CAGCCTATGCGTTCTTCTACAGGGATGAAGTATATCGATTGGTGACTGAATATTGGATTCTGCGTGCATCTTTGAGTGAA GCATTTGCATTGATTCAGTACAGATTGTAGTTATCGTTTCGTGGTTACTCTTGATGGGTATTGTTGCTGACAATACATCC TTTACCTGAAGGTTCTGAAACAAATCTTACAGAAATTAGATGAATTAGATATTATCGTAGTCCTGAAGTCTTGGGTCAAG GTGGTTTTAGCTATTGGTTGATGCTATTGCTTTGATCAATCGGTTTGGTGGGACCTCAGAAGTGTCAGTATGATATCTGG TACTTTTTCATTTCTACCACCTTCGTCCTGCAGCCTTTACAAAGCCGTGGGTCTATTAATGAATAAAGCTGTGCAGCCCT TCCACCAGAAAGTTTCTGCTTCTATGGCCTCTTTTGTCATGACAGAAAATTGATGGTGGATTTTGCTGGAGCAGCTGGAA CCTGTTAATATTTTATACACCTCTTGAGCATCATCTACAAGAGATAAATGTCATCTATCTTTTGTGTTTTTGTTTACATT TGTTGAATAAAGAAAGTGCTGCTTTGTATTCCAAGGGCGCAATGGAGAGGTGAATATGAATTTCTTTTTTCCTGAAGAAT TTACTATTTCCTACCTTATCTGCTGTTTTTTTTAATGACTTCTTGGAAAATACAGGTACACGATAATTAAGGAAGTTGGT GATGGAACGTTTGGGACTGTCTGGAGAGCTATAAATAAGCAAACTGGTGAAGTTGTAAGTGATCGTTAACATGAAGATGC TCCATTTGGATTTTGGATTCAGATTTTATCCTAACAAGTCATAAAATTACAGGTTGCAATCAAGAAAATGAAGAAGAAAT ATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGGTATTGCATCTTACTGATCTTTCTGAAGCCTTATTTGTT ATATATTATTAATTATTATTCTTTTGTATCTAATCTCTATTTTCCTTGCTGGCAGTCATTACGAAAAATGAACCACCCAA ATATTGTTAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTATATGGTAGGTAACTGGATG TTTTGGTAGACAAGCGGGCTGAATTGGCTGATTTAAGATCTTAAATACTAATTGCTATGTCAATTTCTGGGTGATGCAGG AATGCAACCTTTACCATCTTATGAAAGATAGGGAAAAGCTGTTCTCTGAAGGTGAAATTAGAAATTGGTGTTTTCAGGTT TTCCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGCGACATGAAACCTGGTAATTTTATCTAGTCTTGTAG AGTACGTTGTTCATCATTCGTTTATATCATGTGTATCATGTAATGTATTTGTTGTTAGCATCTTGTTCTCTACTACCAAT TCTCTACTTTCTTTTGTCAAAAAGTGATTTTTATGCAATTTGTAGATCTAGCTTGTTTTGATCAAGAACCTGACCGAGGG TTGTTTACGTCTTCATTCCTTAATTGCATAAATTTTACTGTTTTGACCCAAGGTTTGATGCTCTGCAGAAAACTTGCTGG TTACCAAGGATATTATAAAAATTGCCGATTTTGGCCTAGCCCGAGAGATCAGCTCACAACCACCCTACACTGAGTATGTC TCCACACGATGGTATGTGCCCTTGGCTTTTGCAATAGATATATCATGTCTCCGTGTGTTCGATACTCAATAACTAATATG GTGTGGCTTTTGAATAGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTCATCTATATAACTCCAAAGTTGGTAAGTCTCT GATGTGGAATATTGATGTTGTGTATGATTTGCACTAGTATGTTTTTTGCAGTGATGATGATGAGTACCATAGTATTTATT GATTTTTTTTTCCTTCTTTTAGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTATCTCTCCGTCCTCTGTTCCC AGGAGTCAGGTATTAGCTTCTCTCTTCTGCCCGCACAATTTCCTGTATGATGGTTCTTTTGAAGTGGATTTGTTTTAAGA TTATTTTTCTATTTCCCCCCTTCAGATTACATCTCACTTATTTTCATTTGTCCTGATAAGATTTTGAGACAATCAGACTC TGCAAAAGACTTGGCTTTTCTAGAAACTGTTATAGTAGCTTTTCGAAATAATATCTTACAAAGTTACAATAGATGAGAGA GTTCTATTTATAAGTTATAACTGTTATCAAACGCGAAATATCTTCTGCTGTAACATAAAAAGATAACTTTAAATGCAACT TCAAAACATATTTTTAAGTTTATACAAAACGGAGGCAGAAAATATATCTTTATGGGGGAAATAATTGTAAGGCACTTAGT TGAGTTCTGAACAAATGTGGTTTTTTTTTATATGCTTCAAAGTAGAATCCTGCTCTATAGTCCTTTTTAATACCTGGAAG TTGGAAATGAACATGTTCCTTAATTGCAACACATGCAGTGAAGCGGATGAGATTTACAAAATATGTGGTGTGATAGGCAG TCCAACCATTGAATCATGGGCTGATGGACTGAGACTTGCAAGGGCTATTAACTATCAGTTTCCACAGGTTAGTTCAACTT TATTGACAATTTGACATTGGGTCGTGTTATTTTTGGTAGTTAGCTTTTGGGATGCAATTGGCTTAATTAATATGTTGGGT ATAACCAAGTGAGACAACATTGGCACTCTACTTAGCCCTTGACAGTTGACACTATATGCCTTTTACTTATACAGCTTGCT GGTGTACATCTTTCTGCATTGATCCCATCTGCAAGTGATGATGCAATTAGCCTAATCACAGTAAGTTTCTTCAGTGTATG GCTTAACAGCTTAGCCCTTTATCACATATCAACTAATAATGCTCAATGCATTTTCTGTGCTATTAATGCAGTCACTTTGC TCCTGGGATCCCTGCAAGAGGCCAACAGCTTCAGAGGCCCTTCAACATCCTTTCTTCCAGGTGATCTTTTAACTTGTTCT TGTTCCTTTTTCTACCTCTTTATTATTCTATAGTCTTTTTATTTTATATGCCGTGTTATTCAGACTTTTTTTTATTTGTT GTAGAGTTGCTTTTACATTCCTCCATCCCTTCGCACCAGAGCAGTAGCGAGAACTCCTCCACCTGGTTTGTGTTGTTTAA CTGTTTTGTTAGCTGTAGACAAGCTTCGTGAATAATCATATGGAAGTAATTGTCTTTTTTTTCAGCTGCAACTAGAGGGG CACTGGATCAGCAGGGGGCTAAGAGATACTCCGGTGTTTTGCCTAATTCAAAGCTGACCAATAATTTTTCTTCTCTGAAA GTGCATCCTTCCTTAGTTTCAGGTGATCTAATTGGTTTGATTTTTTTGAGTATGTGGAGAAAATTTTATCATTACAACAA GAACATAATAAAATGTTACTATTTTGCTTAATATTCTGCATAAATTAACTAAACAATTACATTCAATAATTGAAAGATCA TATTGTTCAGTTTACGAAAATTAGCTGCTTGACAGTTATTATTATAATTTTTTATTTTACTTTTACTATTTTTGCTTCAT TTAGGTTCACGGCCGTGGCTTCCAATAGTAATGAACCTATCAAGTCTTGCGCTATGGAAACCAAAAATATGTCTTACCAA TATAATAATTTTACTGCCATATTTATTTATAACCAACAGTTTAAGTCTGTTATTACTTTCGGAATTGTACTTCTCAGATA AAATTTTATTTCTCAAACTCACGTTGATGTCATTAGCACCTAAAAATCTTGTATACATTAACAATGAAGTTGTGGAGGTG CACTTTTGGGTTAGGTTCTTAGATTTGGAATTGACGTTTTAGCTTGTCAACTAATAATTGGAAAGACTGACAGAGCATAG ACTAGTTATTTTCTGATTGCGTAGAATTGTTATATGGGATTATAGTTCTAATTCTGGAAGGGCTTCTGATCATAGGAATT GGAATTGATTGGCCCAATTCTAATTTCTAGCACTCTAGTTTCATGCTAATCAATAGATGAGCTTTTCTCCATTGAATTAT ATCTATAATACCATAATGATTGAGCAGAGTTCTGATCTGCTTGTGAATTAATGTTACAGGTGTCCAACGGAAGCTGGATA TGGTAAATCAGGTGAGTTGTTCTTGCCACATCCCTCTTTCTGTCAAGCTTTCTGTTCATGAACCCTTTCTTTTTACCCCT TAACATTAAGAAAAACCAAATTATAATCCTCTTTCTCATAATGGTCGATTATTTTTAGTTTTGGTAAGCTGGTTCTTATC TTGAATTCCTCTATGTCATGCCAACAATTTTCATGGTTATGCTTTTGAAGGATGGAATGAAGAAAGAGAATTCGATGAAG ACTTCGATACAGTCAAAATATCGACAGCCAGGGAAGGACAGTCCAAGTAAGATTATACTCTAATGATCGGATAAAACTAC TCTCAGATATTTCTTTGAAAGTGTTTTTTTTTAATATGGTCTTGTATTTATGTGAAGTCACTATGGTTGTGTTAGCAGCT TCTATGATCAAAGGGAGGGGGGTTTCCGAGACTACCGAGAGGTTGGCCAATATGTCTGTTGGTACTCGGAGACAGTCCAT GGGGCAATCCCGTCCTCCAATGAAGGCTGGAGGAGTCAATTGGATTTCTGAATCTGGAAACTTCATGCTCAGGCCCGCAC AACAGATTCCAACTGGAAGAACCTTCACAAGAAAAGTTGCCGGATGAAACCTCAATGTTGTGAATGTCCTTTACAAGTAT TAAAATAAATGTCGGTTTTGACATATTCTGATTATGACTCTGCAAGTCTTAAACTGCTCAAACTAGTATTGTTTGGCGTT GTTTGTAATCGTTTCGTACTATCTATTGTATTATTGGGCGTAGATGGCTTTGCTTATACTTATGCTGATGCCTTTCTAGT TATATATATGCGAGCTTGTGATTGAAGGTTTCCCCTACTGTGGTGTGTGGATATTCTGTGTTGATTATGTCCATTTTCTT GCTTGTTGCGTTTGTACCTACTATCTGTCCTCGCACGTGTTGTACGTAGTGATGTTCAATGAAAATAGTTCACTAATCGA CTCCTTGACTATAGAGCTGTGATTTTACCATGGCAGAACTGATTTAAAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0342500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATATCTGAAAGTGCTGCTTTGTATTCCAAGGGCGCAATGGAGAGGTACACGATAATTAAGGAAGTTGGTGATGGAAC GTTTGGGACTGTCTGGAGAGCTATAAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACT CTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAACCACCCAAATATTGTTAAGCTGAAGGAA GTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTATATGGAATGCAACCTTTACCATCTTATGAAAGATAGGGA AAAGCTGTTCTCTGAAGGTGAAATTAGAAATTGGTGTTTTCAGGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGAT ACTTCCATCGCGACATGAAACCTGAAAACTTGCTGGTTACCAAGGATATTATAAAAATTGCCGATTTTGGCCTAGCCCGA GAGATCAGCTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTCA TCTATATAACTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTATCTCTCCGTCCTCTGTTCCCAG GAGTCAGTGAAGCGGATGAGATTTACAAAATATGTGGTGTGATAGGCAGTCCAACCATTGAATCATGGGCTGATGGACTG AGACTTGCAAGGGCTATTAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTTTCTGCATTGATCCCATCTGCAAGTGA TGATGCAATTAGCCTAATCACATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCAGAGGCCCTTCAACATC CTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCACCAGAGCAGTAGCGAGAACTCCTCCACCTGCTGCAACT AGAGGGGCACTGGATCAGCAGGGGGCTAAGAGATACTCCGGTGTTTTGCCTAATTCAAAGCTGACCAATAATTTTTCTTC TCTGAAAGTGCATCCTTCCTTAGTTTCAGGTGTCCAACGGAAGCTGGATATGGTAAATCAGGATGGAATGAAGAAAGAGA ATTCGATGAAGACTTCGATACAGTCAAAATATCGACAGCCAGGGAAGGACAGTCCAACTTCTATGATCAAAGGGAGGGGG GTTTCCGAGACTACCGAGAGGTTGGCCAATATGTCTGTTGGTACTCGGAGACAGTCCATGGGGCAATCCCGTCCTCCAAT GAAGGCTGGAGGAGTCAATTGGATTTCTGAATCTGGAAACTTCATGCTCAGGCCCGCACAACAGATTCCAACTGGAAGAA CCTTCACAAGAAAAGTTGCCGGATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0342500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MISESAALYSKGAMERYTIIKEVGDGTFGTVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKE VIRESDILYFVFEYMECNLYHLMKDREKLFSEGEIRNWCFQVFQGLAYMHQRGYFHRDMKPENLLVTKDIIKIADFGLAR EISSQPPYTEYVSTRWYRAPEVLLQSHLYNSKVDMWAMGAIMAELLSLRPLFPGVSEADEIYKICGVIGSPTIESWADGL RLARAINYQFPQLAGVHLSALIPSASDDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVARTPPPAAT RGALDQQGAKRYSGVLPNSKLTNNFSSLKVHPSLVSGVQRKLDMVNQDGMKKENSMKTSIQSKYRQPGKDSPTSMIKGRG VSETTERLANMSVGTRRQSMGQSRPPMKAGGVNWISESGNFMLRPAQQIPTGRTFTRKVAG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF56112
12 300 289 2.97E-95
IPR011009
Gene3D
G3DSA:3.30.200.20
13 96 84 1.8E-26 –
CDD
cd07830
17 296 280 0.0 –
PANTHER
PTHR24055
17 460 444 1.1E-210 –
PANTHER
PTHR24055:SF406
17 460 444 1.1E-210 –
ProSiteProfiles
PS50011
17 296 280 48.386
IPR000719
SMART
SM00220
17 296 280 1.8E-104
IPR000719
Pfam
PF00069
17 296 280 4.0E-75
IPR000719
ProSitePatterns
PS00107
23 47 25 -
IPR017441
Gene3D
G3DSA:1.10.510.10
97 301 205 7.5E-66 –
ProSitePatterns
PS00108
134 146 13 -
IPR008271
MobiDBLite
mobidb-lite
372 397 26 - –
MobiDBLite
mobidb-lite
372 389 18 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0342500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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