Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0361300 |
| Transcript ID | LotjaGi2g1v0361300.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0R0HHN6|A0A0R0HHN6_SOYBN Beta-galactosidase; Found in the gene: LotjaGi2g1v0361300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:85869969..85873028) extracted from Lotus japonicus Gifu genome v1.2.
ATTTCACATATTTTATTAAATTCAAAGTTTTAATCGTACAAATGCCCTGTATGTTGAAGAATTTTGGTATAATTACCTAT TGGTCCATTGCATCAGTGTCAATTTCCACAAGCTTCTCTAGTTCCCTCCTTGTTCCCAATTTTGTCAGTGGTTCTTTTTG TTTATCACCTTGTATGCAAATACTCATTTTACATGCTATATTGAGTATCACTCTCTACTACATGCATAATGTATGTCTTT TACTGTTTAAACTCAGGCTGCTGTATACAAGACAGAAGCTGAATGTGTTGCTTTCCTTGCCAACATAGACAACACATCTG ACGCTACCGTGAAATTCAATGGCAATTCATATAACTTGCCTGCATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTT GTGCTTAATACTGCAAAGGTGTGCCTTATTAACTCACCAATCAAGATGGGTAGTTTCAATTGACTGGTGTTACTTTAGAA AATCTATTCTAAATTAATATGTTGATGATTCTATGACTAGAAGTATGTAGCATGAACTAAAAGTTATTGGTGGTATGACA GATTAATTCTGAATCTATGATTTCAAGCTTCACAACTGAATCATTAAAAGAGGTTGGTTCTTTGGAAGGTCCAAGCCCAG GGTGGAGTTGGATTAGTGAACCAATTGGTATTTCAAAGGCTGATTCGTTCTCAAGATTTGGATTACTGGAGCAAATAAAC ACAACAGCGGATAGAAGTGACTACTTGTGGTACTCATTAAGGTATAGATCAGCCTCTAAGGTTGAGAAAGCTTACTTTTG ACTTGCAATTTTCAACTCCATGGTAACTTTTTTTTTTCTGGAAGAATTGATCTTGAAGATGATGCTGGCGCTCAAACTGT CCTTCACATTGAATCCCTTGGTCATGCCCTTCATGCTTTCATAAATGGGAAGCTTGCAGGTAAATATCTCTGAGTTCTAT GCTTTCTGTTTCATTGTATTTTAAATGCAGCTTCTCATCTATTTCATGAGTTATCTAATAATACTTCAGGGAGCGGAAAA GGTAACAGAGACAATTCTAAGGTCAATGTGGAGATCCCCATCACACTTGTTGCTGGGAAGAACACAATTGATCTACTCAG TTTAACTGTGGGACTTCAGGTTCACCTCTTCTTATTGTAATGTATATATGCATTTAAAACAGAAGACATTTTGGTTTGTA TTATACGCATTGGCTTGTTATTTCCACCCCTAAGTAGTTTGGCTTTATCATCATGTCATTTCTCATTACTTCATTAGCTT ATGTTTGTGAACCTTATACACCCCAGCACTTTGGACCTTTTTTCGATACATGGGGTGCGGGGATCACTGGTCCAGTAATA TTGAAAGGTTTGAAGAATGGCAGTACTCTTGACTTCTCCTCCAAGCAGTGGACATATCAGGTTATTCTTTGGTTAAATAA AAGCCTATTATTTTTCTTTGTTCTTTTGGTGACTTCATTATGTGAATACATATAACTGAAATAATTTGGATTCCATTTTT TAGTTATTTATTGAATACATAGCATTATTATTTTCATGAATGCAGATAGGTCTTAAAGGTGAAGACTTAGGTCTTCCTAG TGGCACTTCTGGACAGTGGAATTCACAATCTACTTTACCTAAGAATCAACCCTTGACTTGGTACAAGGTATCCTAATATG TATACTAATGGCATACTACAATGAAAATTAACAGAATGCTACTGTAGTATTTTTGCTACTAATAGTGCTACATGTTGGAT TAGATAAACTTCAGTGCTCCTTCCGGTAATGATCCAATTGCAATCGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGT AAATGGACAGAGCATTGGACGATACTGGCCTACATATATCTCTCCAATTGATGGCTGTACCAGCTCATGCAACTATAGAG GGCCTTATGATTCATCCAAATGTCTCAAGAACTGTGGAAAACCATCACAGACATTGTATGTTATAATATTCTAGATGAGA GATATTGAAATTTATATTGAATGGTTTGAGCCTTTGAGGAATGCAAAGGTGATCTTGTTAGATCCTTATTGAGTCACTGA TCCTGCAGATACCATGTACCAAGATCGTGGTTGCAACCAGATAGCAACACTCTTGTATTGTTTGAGGAAAGTGGAGGCGA CCCTACTCAGATATCTATTGCAATAAAACTGATAGGAAGCTCATGTTCACATGTATCTGAATCTCACCCTCCACCTGTAG ACTTGTGGAATTCAGATACAGAATCAGATAGAAGTGGGGGTCCTGTACTATCACTGGAGTGCCCTTATCCTAATGAAGTC ATCACTACCATTAAATTTGCTAGTTTTGGAACACCTCATGGGAATTGTGGAAACTTCAGCCATGGAGACTGCAGCAGCAA ACAGGCTCTATCCATTGTGCAGAAGGTGTTACCAGCTTTATGATCAAATAAGTTCATATACCTTTTGCTTAGTACTTTTG ATATTTTCCATTTCAGTTGAGAGTGAGACTAAATCTTAAGATCTTTAACAGGCCTGCATTGGATCAAGCAGTTGTAGTAT TGGAGTATCAATTAATACATTTGGAGATCCATGTGGAGGAGTAACAAAGAGTTTAGCTGTTGAAGCCTCTTGTACATAGA CGTGTTGTTTCAAGCATTCCCACTTCCTAGCTGGAACCGGTCAGGAAAGCATTCTCCAAGTGTCTTAGACTTATAGGATG CTCACTCATTAGCCAAACTAATGAGGAGAAGCTTTTTTGAATAGCTTCCAAATACCAGAATCAATTCTGTGGTGAAACTT AAGTGAGTAGTTTCCAAATGCCAGAATTGACTCTGACTAAAATCAAGTTGCTACAAACAAGCTAGAAATATATGTCAAAT TGTTATATTTTCATGAGAGGACCGGACCCAACACAGTTCTTTAGTTGTGGAAGATTGAGCTATTTTCTGAGCTTTTTTTA TCTGATAGTGCTAGTTTGTCCAAAATGTCTTAAGGTCATCTCAACTTAAGCAATGAAACAATATTCTAGGTTTTGCTAAG ATAATTAATTTAGCTGTAAG
CDS sequence (LotjaGi2g1v0361300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTCAAGCTTCACAACTGAATCATTAAAAGAGGTTGGTTCTTTGGAAGGTCCAAGCCCAGGGTGGAGTTGGATTAG TGAACCAATTGGTATTTCAAAGGCTGATTCGTTCTCAAGATTTGGATTACTGGAGCAAATAAACACAACAGCGGATAGAA GTGACTACTTGTGGTACTCATTAAGAATTGATCTTGAAGATGATGCTGGCGCTCAAACTGTCCTTCACATTGAATCCCTT GGTCATGCCCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGAGCGGAAAAGGTAACAGAGACAATTCTAAGGTCAATGT GGAGATCCCCATCACACTTGTTGCTGGGAAGAACACAATTGATCTACTCAGTTTAACTGTGGGACTTCAGCACTTTGGAC CTTTTTTCGATACATGGGGTGCGGGGATCACTGGTCCAGTAATATTGAAAGGTTTGAAGAATGGCAGTACTCTTGACTTC TCCTCCAAGCAGTGGACATATCAGATAGGTCTTAAAGGTGAAGACTTAGGTCTTCCTAGTGGCACTTCTGGACAGTGGAA TTCACAATCTACTTTACCTAAGAATCAACCCTTGACTTGGTACAAGATAAACTTCAGTGCTCCTTCCGGTAATGATCCAA TTGCAATCGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAGAGCATTGGACGATACTGGCCTACATAT ATCTCTCCAATTGATGGCTGTACCAGCTCATGCAACTATAGAGGGCCTTATGATTCATCCAAATGTCTCAAGAACTGTGG AAAACCATCACAGACATTATACCATGTACCAAGATCGTGGTTGCAACCAGATAGCAACACTCTTGTATTGTTTGAGGAAA GTGGAGGCGACCCTACTCAGATATCTATTGCAATAAAACTGATAGGAAGCTCATGTTCACATGTATCTGAATCTCACCCT CCACCTGTAGACTTGTGGAATTCAGATACAGAATCAGATAGAAGTGGGGGTCCTGTACTATCACTGGAGTGCCCTTATCC TAATGAAGTCATCACTACCATTAAATTTGCTAGTTTTGGAACACCTCATGGGAATTGTGGAAACTTCAGCCATGGAGACT GCAGCAGCAAACAGGCTCTATCCATTGTGCAGAAGGCCTGCATTGGATCAAGCAGTTGTAGTATTGGAGTATCAATTAAT ACATTTGGAGATCCATGTGGAGGAGTAACAAAGAGTTTAGCTGTTGAAGCCTCTTGTACATAG
Protein sequence (LotjaGi2g1v0361300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISSFTTESLKEVGSLEGPSPGWSWISEPIGISKADSFSRFGLLEQINTTADRSDYLWYSLRIDLEDDAGAQTVLHIESL GHALHAFINGKLAGSGKGNRDNSKVNVEIPITLVAGKNTIDLLSLTVGLQHFGPFFDTWGAGITGPVILKGLKNGSTLDF SSKQWTYQIGLKGEDLGLPSGTSGQWNSQSTLPKNQPLTWYKINFSAPSGNDPIAIDFTGMGKGEAWVNGQSIGRYWPTY ISPIDGCTSSCNYRGPYDSSKCLKNCGKPSQTLYHVPRSWLQPDSNTLVLFEESGGDPTQISIAIKLIGSSCSHVSESHP PPVDLWNSDTESDRSGGPVLSLECPYPNEVITTIKFASFGTPHGNCGNFSHGDCSSKQALSIVQKACIGSSSCSIGVSIN TFGDPCGGVTKSLAVEASCT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 420 | 416 | 5.0E-232 | – | |
| PANTHER | 5 | 420 | 416 | 5.0E-232 | ||
| Gene3D | 5 | 151 | 147 | 4.1E-9 | ||
| SUPERFAMILY | 40 | 152 | 113 | 2.92E-18 | ||
| Gene3D | 157 | 248 | 92 | 1.5E-11 | ||
| SUPERFAMILY | 164 | 329 | 166 | 1.03E-28 | ||
| PRINTS | 196 | 210 | 15 | 4.7E-11 | ||
| PRINTS | 223 | 239 | 17 | 4.7E-11 | ||
| Gene3D | 263 | 311 | 49 | 6.6E-5 | ||
| Gene3D | 330 | 420 | 91 | 2.2E-13 | ||
| ProSiteProfiles | 334 | 420 | 87 | 16.219 | ||
| Pfam | 342 | 419 | 78 | 1.7E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi2g1v0361300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…