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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0367100 |
| Transcript ID | LotjaGi2g1v0367100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein family; TAIR: AT5G60070.1 ankyrin repeat family protein; Swiss-Prot: sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr|A0A151TN11|A0A151TN11_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi2g1v0367100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86434923..86438358) extracted from Lotus japonicus Gifu genome v1.2.
AAGGTGAATCCAATGGATACACAAACTGTGCTGCAGCCACAAGCAAGCCCTCCAAGGAAAAAAATGGCCAAACAATTTAC AGGGAAAAGGGATGATGCACCTTTACACTCTGCAGCAAGGGCAGGAAATCTGGCAGCTCTGAAGGACACACTCAGTGGTG CTGAAGAAGGGGAATTGAGAGAGTTGTTGGTAAAGCAGAACCAAGCTGGAGAAACAGCACTTTATGTTGCTGCTGAATAT GGACATGTTGATATGGTGAGGGAGTTGATTAAACATTATGATCTTGCTGATGCTGGAATCAAAGCAAGAAATGGTTTTGA TGCACTCCACATTGCTGCCAAACAAGGGGATTTAGGTTTGTCTTTGTTGTGGTCTTTTATTTACTTTGTTCTTGTGTAGT TTGTGCTTTTCAGGGTTCAGGATTCTTTGAAAACTTCACATGACACTGTCATGTTAACATTTTGTTTAATCTCTCTCTTT ATACCTATTAGAGAGGTATGAGCCTCTAAATATCTATGAAGTGAGAGATAGACAAAGTTTCACATGACTGTTTCTTGAGG GAGGCTGCCTTCTCTCAGGCTAACAGTCTTCTACTTCTATTCGACTGCTCTATGACAGGTTTCCCTGTATCCTACTATCC TCTATCCAAATAGATATGTTCCTAGGAGCAGCTATTTCGATCTTTATATATTTTGTCATGTGAAGTTTCCACACGAGAGG ATTTGGATTTATGAAAACCAATTTCTCAAGTTTCCACATGAGAGGATCCTAATTCGATTTTCATAGGGAATATAATTTTT GTTTTGTTTTGTTTTGCCTGTTGCAGATGTGCTGAGGATACTATTGGAGGCTCATCCTGAATTGTCAATGACTGTGGATC CATCAAACACCACGGCGTTGCACACGGCTGCAACACAAGGGCATACTGAGATAGTGAAGTTTCTTTTGGGATCAGGAAGT AGCTTGGCAACCATTGCTAGAAGTAATGGGAAAACAGCTCTGCACTCGGCTGCGAGGAACGGGCATTTGGAGGTTGTGAA ATCACTTCTGGATAAGGAGCCCGTGATCGCGACACGGACTGATAAGAAGGGGCAGACGGCGCTTCACATGGCGGTGAAGG GGCAAAGTCTTGAGGTGGTGGTGGAGCTGATAAAAGCAGACCCTTCAACAATAAACATGGTTGATAATAAGGGTAATGCG GCGTTGCATATAGCAACCAGGAAGGCCAGAGCTCAGGTAACTTAGTCTATGCCTGCCATAATTCTGCTAATGTTTACTAT AAAAAAAATTCACATATAAGGTTGTGATGAATATCACTACTCAATCTTTGTCACAAATTGGAGACATTTATCTTAAGCTA TCTTGAGTCAGGCATTTAGTGCTTGGTAACTGGTAAGTGCTTGTTCCCGCCACAAATGAAAATGATAAGAATATATTTGG GTAACATTTGGGTTGAAATCTGATCTAAGAGTTTCTGCTATGACCTATTACTTAGTTGGTCCCCTTGCATTGTTTGTATT AGAATTTGGACTAGGCATGACTCTACCCAAAAAACTAGCTGGGGTGGGGGGGGGATTGCACTACCCTTCTATAAGGACTT ATATGAGACTGACAACCCTCATGTTCAGAGCTAGGCATCTAGAGTGGAAAGTTTGCAGGAGTGGACATACCAAATTTAGA CTTGAACAATTTTCCAGCTCAACCATATGTGCAGTCATACCAAGTTTCCAACTTCTATAAATGTCAAATATGTTATTCAG CCAGTCAATGTTTGATTTGTGATATTCATAACATTGTTCAAGTACAGGTCTTTGTTAGCTGAGGCCTAGGTCTCGCAGTA TGATCCTTTTTGAAGATTATAGTCCTTAGCTTCTAAATTCTGAAAGTGTCTTTGAGACTGTGTTAGTCGGACACCATATA AATTATTGGGACAATCTCTTACTGATTTGGTTATTGGAAAATATGAAAAACATAAAAAGTAAAGAAATTTCTGAGAACAA GACCTTATTTTAATCCCTAGATTCTTAAGTTGAATCAACTACCAAAAATAATGTTGAAACATTCTTGACTTGGAATCAAT CTTAATCCATTTTCACATTGATGGCAAATGCATTATTGGGGTAAAGGAACAGGATTAATGCATGTTTGGAAATTCAACTA CAATTGATTCTGAAGTCAGAATCAATCATGGGGAGAAACTATTATGTGAGTAGCTTCTAGACTTAAGAATTGACTCTGAA AAAAAGAGAAGCAGATCCAAACATGTCATTAGTATTAAGTAATGACATGGAATAAGATATTCATCATGAAGGAAACAGAT GCAACTGTAAAGGGTAGCATTAGATACATTTTAAAAACCATCCTTTTCTACTTACCTACTAGCAGGAAGTGTAATGAGTA ATGACCCTATGTGCATCTGAGTCATCTCAATCTATCCCTCGAATTCAACTCTTCTTCAATTTGCTTTAATGCTGATGAAC TCATTACAGAATTCAATATCTATTTCAAAGTTGTTGGATTAAATTAAAGTTACAGGCTGAATTTCTAATATTTGTTTGTG CAGATTATTAAGTTGATACTTGGACATTCAGAAACAAACGCCTTGGTTGTTAATAAGTCTGGTGAAACTGCATTAGACAC TGCTGAGAAAACCGGGAATTCTGAAATTAAAGACATTTTGGTGGAACTTGGTGTTCAAAGTGCCAAATCTATAAAGGCAA AGCCAGCAACCGGCACAGCCCGAGAACTGAAACAAACAGTTAGTGACATAAAGCATGAAGTCCACTACCAGCTAGAACAC ACGCGCCAGACGCGAAAAAGCGTGCAAGGCATCGCGAAACGCCTCAACAAAATGCACGCTGAAGGGCTAAACAATGCAAT CACCTCCACGACCGTGGTCGCAGTCCTCATCGCGACAGTGGCCTTCGCGGCCATCTTCGTCGTCCCGGGCCAGTTTGTTG ATGATCCGAAGCAAATTCCTAAGAAGATGACGCTCGGTGAAGCGAACATAGCCCCACAGCCTGCCTTTCTCATCTTCTTC GTGTTCGATTCTATCGCGCTCTTCATTTCACTGGCCGTGGTGGTGGTTCAGACGTCGATCGTCATTATAGAAAGCAAGGC CAAGAAGCAGATGATGGCCATTATTAACAAGCTAATGTGGCTGGCTTGTGTTTCAGTTTCTGTGGCCTTCTTGGCTTTGT CCTTTATTGTGGTAGGGAAGGATCAGAGGTGGCTTGCAATTGGAGTAACAATTATAGGGACTACTATAATGGCTACAACT TTGGGCACCATGAGTTATTGGGTCATTAGGCACAGAATTGAGGCCTCAAATTTGAGGAGCATTAGGAAATCTTCAATGGG AAGCAGGTCAAGGTCTTTTTCAGCATCTGTTTTATCAGATTCTGAGCTACTGAACAATGTAATGTACGCGATATAG
CDS sequence (LotjaGi2g1v0367100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATACACAAACTGTGCTGCAGCCACAAGCAAGCCCTCCAAGGAAAAAAATGGCCAAACAATTTACAGGGAAAAGGGA TGATGCACCTTTACACTCTGCAGCAAGGGCAGGAAATCTGGCAGCTCTGAAGGACACACTCAGTGGTGCTGAAGAAGGGG AATTGAGAGAGTTGTTGGTAAAGCAGAACCAAGCTGGAGAAACAGCACTTTATGTTGCTGCTGAATATGGACATGTTGAT ATGGTGAGGGAGTTGATTAAACATTATGATCTTGCTGATGCTGGAATCAAAGCAAGAAATGGTTTTGATGCACTCCACAT TGCTGCCAAACAAGGGGATTTAGATGTGCTGAGGATACTATTGGAGGCTCATCCTGAATTGTCAATGACTGTGGATCCAT CAAACACCACGGCGTTGCACACGGCTGCAACACAAGGGCATACTGAGATAGTGAAGTTTCTTTTGGGATCAGGAAGTAGC TTGGCAACCATTGCTAGAAGTAATGGGAAAACAGCTCTGCACTCGGCTGCGAGGAACGGGCATTTGGAGGTTGTGAAATC ACTTCTGGATAAGGAGCCCGTGATCGCGACACGGACTGATAAGAAGGGGCAGACGGCGCTTCACATGGCGGTGAAGGGGC AAAGTCTTGAGGTGGTGGTGGAGCTGATAAAAGCAGACCCTTCAACAATAAACATGGTTGATAATAAGGGTAATGCGGCG TTGCATATATCTGGTGAAACTGCATTAGACACTGCTGAGAAAACCGGGAATTCTGAAATTAAAGACATTTTGGTGGAACT TGGTGTTCAAAGTGCCAAATCTATAAAGGCAAAGCCAGCAACCGGCACAGCCCGAGAACTGAAACAAACAGTTAGTGACA TAAAGCATGAAGTCCACTACCAGCTAGAACACACGCGCCAGACGCGAAAAAGCGTGCAAGGCATCGCGAAACGCCTCAAC AAAATGCACGCTGAAGGGCTAAACAATGCAATCACCTCCACGACCGTGGTCGCAGTCCTCATCGCGACAGTGGCCTTCGC GGCCATCTTCGTCGTCCCGGGCCAGTTTGTTGATGATCCGAAGCAAATTCCTAAGAAGATGACGCTCGGTGAAGCGAACA TAGCCCCACAGCCTGCCTTTCTCATCTTCTTCGTGTTCGATTCTATCGCGCTCTTCATTTCACTGGCCGTGGTGGTGGTT CAGACGTCGATCGTCATTATAGAAAGCAAGGCCAAGAAGCAGATGATGGCCATTATTAACAAGCTAATGTGGCTGGCTTG TGTTTCAGTTTCTGTGGCCTTCTTGGCTTTGTCCTTTATTGTGGTAGGGAAGGATCAGAGGTGGCTTGCAATTGGAGTAA CAATTATAGGGACTACTATAATGGCTACAACTTTGGGCACCATGAGTTATTGGGTCATTAGGCACAGAATTGAGGCCTCA AATTTGAGGAGCATTAGGAAATCTTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGCATCTGTTTTATCAGATTCTGAGCT ACTGAACAATGTAATGTACGCGATATAG
Protein sequence (LotjaGi2g1v0367100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTQTVLQPQASPPRKKMAKQFTGKRDDAPLHSAARAGNLAALKDTLSGAEEGELRELLVKQNQAGETALYVAAEYGHVD MVRELIKHYDLADAGIKARNGFDALHIAAKQGDLDVLRILLEAHPELSMTVDPSNTTALHTAATQGHTEIVKFLLGSGSS LATIARSNGKTALHSAARNGHLEVVKSLLDKEPVIATRTDKKGQTALHMAVKGQSLEVVVELIKADPSTINMVDNKGNAA LHISGETALDTAEKTGNSEIKDILVELGVQSAKSIKAKPATGTARELKQTVSDIKHEVHYQLEHTRQTRKSVQGIAKRLN KMHAEGLNNAITSTTVVAVLIATVAFAAIFVVPGQFVDDPKQIPKKMTLGEANIAPQPAFLIFFVFDSIALFISLAVVVV QTSIVIIESKAKKQMMAIINKLMWLACVSVSVAFLALSFIVVGKDQRWLAIGVTIIGTTIMATTLGTMSYWVIRHRIEAS NLRSIRKSSMGSRSRSFSASVLSDSELLNNVMYAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 244 | 244 | 0.0 | – | |
| PANTHER | 1 | 244 | 244 | 0.0 | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| Phobius | 1 | 326 | 326 | - | – | |
| Gene3D | 19 | 129 | 111 | 1.6E-19 | ||
| ProSiteProfiles | 26 | 270 | 245 | 48.411 | ||
| SUPERFAMILY | 30 | 268 | 239 | 8.19E-48 | ||
| Pfam | 31 | 124 | 94 | 4.0E-13 | ||
| SMART | 65 | 94 | 30 | 0.006 | ||
| ProSiteProfiles | 65 | 88 | 24 | 9.271 | ||
| SMART | 100 | 129 | 30 | 0.0012 | ||
| ProSiteProfiles | 100 | 132 | 33 | 10.713 | ||
| Gene3D | 130 | 294 | 165 | 1.8E-31 | ||
| Pfam | 133 | 192 | 60 | 7.8E-15 | ||
| ProSiteProfiles | 134 | 166 | 33 | 11.514 | ||
| SMART | 134 | 163 | 30 | 0.077 | ||
| SMART | 168 | 197 | 30 | 1.2E-4 | ||
| ProSiteProfiles | 168 | 200 | 33 | 11.568 | ||
| ProSiteProfiles | 202 | 235 | 34 | 9.805 | ||
| SMART | 202 | 232 | 31 | 0.0013 | ||
| Pfam | 203 | 235 | 33 | 0.024 | ||
| PANTHER | 244 | 514 | 271 | 0.0 | – | |
| PANTHER | 244 | 514 | 271 | 0.0 | – | |
| SMART | 244 | 273 | 30 | 2300.0 | ||
| Pfam | 325 | 441 | 117 | 6.9E-27 | ||
| Phobius | 327 | 352 | 26 | - | – | |
| TMHMM | 330 | 352 | 23 | - | – | |
| Phobius | 353 | 378 | 26 | - | – | |
| TMHMM | 379 | 401 | 23 | - | – | |
| Phobius | 379 | 401 | 23 | - | – | |
| Phobius | 402 | 421 | 20 | - | – | |
| TMHMM | 422 | 441 | 20 | - | – | |
| Phobius | 422 | 442 | 21 | - | – | |
| Phobius | 443 | 447 | 5 | - | – | |
| Phobius | 448 | 473 | 26 | - | – | |
| TMHMM | 451 | 473 | 23 | - | – | |
| Phobius | 474 | 515 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0367100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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