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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0375200 |
| Transcript ID | LotjaGi2g1v0375200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87258280..87265699) extracted from Lotus japonicus Gifu genome v1.2.
ATTTAAATTGCAAAATATTCCTAACCATCCATTGAATTCGAATTCGAAACAAAACCCCAATTTTGTAAGACGGAAAGCGG GTAGAGAAGGAGGAGTGTCTTCACCGGAGAAGTGAGAATCTTCAATCGGAACCCTAGCTTCTGCAATCGCTTTCGATCTT GCAGCTGTTCAACGCCGGCCATGTGCTTGCTGTTGCTTGTGTTTTGGAAGCGAAGCGCCACTAAGCTGCACTACGGCGTC ATTGTGCTTCTGCACCAATTCCATGAATTGCTAGTGTGAGTATTCATCATCCTTAGTAATTCATTTTAAAATTACTGCAT CATCTTTGAATTATCTTCTCATCTTGCAACAATTATTCAAATTATGTGGACCAAATTGAACAGTATCATCTCAATTTACA GTGCACTCTAATTCATTATGAGAAGATGATAATCACTGGTTCCTGCTACTGAACCATGTGTTAGGTTTAGAATTTAGATG GAAAGAAATTGCAATGATGCCATTTAAGTAGCTCAAGTAATCAAGTATTGGTAGGACTGTGACACAAAAAACATAACTGA TAGTTATACCTTACATTCAAGTGTGTGATAAGTTCATTATGCAGGCACCCAGATGGTAGAACAAGATAAAATGCGTCCTT TCCAACTTTGAAGCATCCAATTGCTGTCTTCATCAATCACAAACTCATTCGGGTGCCAGTTCTTTAACTTGCTCCTAAAC TTGGCCATCAATTTCTGGTTCAGAGGAAGCTGCTTGAAACCAGCCCTTGTGTTCCTAATCTGCCACTGTTTGTATGTCTC AGGCCTGTCAATCCTCTCCCGACCTTCACATGCTATCACGTTCATAGAGTTTCGACCTATGATCTCACTCTCATTCATCA TCCTCCATTGGTTATCCCGGGATAGGACAGTGTCAAGCATGTCTAAAACAGCAGAAAAATGGAACAAGGCCTCCCTAAAC CGCGTGACAAAGAAAGGGGTACTGAAAGATCCATTAATGATGGACTGAGCAAAAATATTTGGATTTATCTTCCTGATCAA AAGCAGAACAGCATCTCTGGGAGACTGGGACTGTTCATTTTACTAGTCTCATCCAGCAAATTCTTGAACCTCATCATGCA GTTGACAACAACAAACTCATTGCTCTTAAGTTTAAGGTCTTCAACTCGAATGGTTTCCCAGTTCTGTGATGCTATGGCAG TGTACTCAAAGGGAACATTGAAACGCTTGCAATAGTTAGCCAAACGACGACCGGTCTCCTCGATTCTTTGTGTGGGGCGA AAGCCAGGTAAAGGGAACTCTATCCCTGTGATCCTCAGCTTGGGAGGTCCTCCATCTCTTTCTGATAAAAACTTGATGAG TAATGGCCACTGCAAGCCATATAAGATACCAAAATCAATAATATGAAGAGTTTCAGCTTTTGCAGATGCTTTCTTAATCA TTTTGTTAACATAGAAATGTGCAAACTTTCTGGTCGGGTTAGGAGATAGATAAACTTGATAACCTTTGAAGAAATCATCA GCAGAGGTTGTCTTGTGGGTTGGAGTAGAATAACATAATTGTGCACCGGTAACATCCCCAGCCAAGCGTGCCCCAAGGCC ATTGGCAAAGTAATGAGCCAATCTTTGTGACCCATCACCAAAGGGAGAAGAGTGCTGCCTTATCTGCTTTAGAAGTTCAT TAGCAGCCCTGTTATCAGTGGTATGAATAGCTTGTGCACAAAGAAGCAGAAGAGCCCTCACGTCCACCGTTTCCTTCTTC CTGCCTTGTTTCTTTGGATGAGCCTTCCCTCCATCAGATGAAGTTGGCTTTTCACCTTGCTGTTTCTCTTTTGCTGCGCC GCTCTGTAGGGAATTGTGTTCATTACCAAGTGGCAATTGTTCCATATTTACCAGCACTCGATCAAACACATCAGATAAGT CATCGTCATCAACAACACCAACTGCTGATTTCTTGGTACTTCTCCCTTCTTCATTAGAATCACTTTCTTCACGCCCACGA TTCTTTATACTGCCCTTTAACCCAAAAGAATTCTCCTCAACTATATTGGATGATTCTCCCCTTGACTCTAGACCGGTCTC AATCCGGGGTTCTGGAGGAAGAAGAAACTTGGTAGCTTCTTCTAACCCTCTCCTGAATTGGGAGACTAAATCTGCATCAC TGAAAATATTTTGCGCCAACGGTTTGTTAACAGAAGCATCCAAATCTAGCAGGCCATGAGAATTAAGCTGAAAAGCATGA TCACCAATTACAGCAACATGGGGGGTATCCAGAGGAGGGGGATTCAACTCACAAGAATTGTAGTGTAAATTGCTGATGTT GTCACTGTCACTGCTAGTTGTTTCACCATAAGGGCTTTGAACATTTAAGGGGTGTTGAGTGGGCGAAAGAGATGAGTTGT TGTCAATGAGAGCATCATGGAATGATTTCTCTGTGAGTTGCAGGCTCAAGGAGTCATAAAATGGACCCTGTTCAAGGTTC TCTTCCATCAGGATTTGGCTTATGAACTTTGTGGTTTCTGAGAAGTCAGTGTCTTCTAGAGAAGGATCTGTCACCGAGTT TATGGACATGGATGTCACAGAACCTTGTACAGAGCTCGTATTTGCTGCAAAACTAAGAGGGTCTATATCTAAGAGGTTCC CATGTTGATGAAACACATCCCAGTATGCTGCATATGGATTTGGATCCGAGTCAAATATGCTCCCTTCTTCACAAAACTGG TATCCGTTTGTGAAATCGCTGGCCCCAGAAAAGGTTGTATCCATCTTCATTTCCTTATTTGAGTTAGTCCGTTAAAAAAA CCTTTGATTATAACTTGAAATTACATCTTCACATTCCAAGAACTTCACCATTTTTCAAATGATCAATTGATATCTAAGCT AAAAGCTTCAGTAGTTCATTCTCCAATTTCACATAGCCTCTCTAATGAGTTTTTTCAACGTACAAGTCAAAATAGCAGCC TATAAGATTCAATGTACCTTGAAATGCTTTAAGCCATCGTCACATTTCATATATCAGATCTAGAACAATGATTAATTGCA CTAAGACAAGTGGATGAGAAACAGTGTTTAGTGAGTACACACAACTTGATGCGGGAAGGCTTCCAATAACTTCCTCTAAG TGGAAAATAATTGTGAGAGACTAATTTATGAATTTCTTGTTTATATTAATAAGACTTTTTTTTTCTCAAACAACATTAAG CGAGTGTTTAGATTGACGTTTGTCACAACTCAAAATTGATTTTAATAAAATTGATTAATTGAGTTGAAATGAAATGATTA TATTTTTATACATTTATGAAAAGTGATACTTGTATAAAAATGTTGTTAAGTGATTCTGGGTGTGAAATTAATTATATAAA ATGGTTCATGAACATCAATATTTTCATTCAGAGTTATTTTAATTTTCCAGAATTGGCCAGGATCCAAACACACTCCTTCT TATCTTGTCTCTTTTTAGCCAAACAGAATGCTGACACTTGGACTCTTGGCGGCTCTATGATTTTCAACGGCAAGAAAGAA AAAGACATGGTGCAGAATCTCCCAAATGCAAGTTGTTTCAATATCTATCTGCAAGTGCAAAGTATCCTTGGTTTTTTTAC ATTAGTATTTTTTAACGTAAAAAAACATTTTAGCATTTTTACTACAGTGTTAGTACAATTATTATCTGATTCAATCTGTC ACCTTTTTCTATTTCTTCCGTCGAGCATATGATTCACTTACATTATGTACATTTTAAGCCCACTCATTAACTATACAATT TAATCAATTAGTTTTTTTTTAAATTTCCCATTCTATTTCTCTCAAACATTTCCGTTTCAAGAATAGAGGAGCCAGATATG TACCCGTAAGTCGTATCAATCCATTGATCTAATCTTTGTGTCAAAATCAGAATTCATAGCTATGGTTGGATGATTAATAT GTCAGCTGCATCATACAAGAAATACTTAAGTATGTTTAGTTTTAAGTTTTTAACCTACTTCCAACTGTACATGCATTGCT AGAGTCTAGAGACATTGTATATATGAGAGTTGGTAGTGTTAAAGCAAGTAATGCATTGCACCACATTATTATATCATATC CTCTTTTTTTTGACATAGTATTAAAAAATTGATCCCCTCCATCATCTTTGACAATTGTCCCATTTGATCCTTCTCCGAAT ATTCATGGTGTGATCCCCAAGTATTGTTTACAGATTATGCTCACAGTCATAGATTAGTTAGTCAAAACTCAAAACAGCTG CATCTCTGACTATATAATAACACAGAAATCCAAACATCTCTTTCACCTTCATCTCCATCGTCCTTCAATCAAACCACTAT CATAAAACCAGCAATTGTTCATGGTAATCTTTCCTTCAACCATATCAAATTATTATCGGATTAACTTCTTTTTTCTCATA ATTAATTCTGTCGCATGAAGTTACTTCATGTTTTCATGTTCATGCTTTTCATTTGCTTTTTTATGTTTCTCTGAACAGAA CTATTGAGTTGTGTGCTTTGTTGGTGACTGTTTCTCAAAAAGGAGAAGATGACAGATCCATGGTTTGCTGAAGAAGGAAG CATACTTGTCTCAGATCCAAATCAATATGCATCAGACTGGGATGCCTTTCAACAATATGAAAGCCTCTCAGCGAATTCAA ACCCTGTAGAAGGTTCTGTTTCATCCATGTCCATGAACACGGTTACAGATCCTTCACTAGAAGACACCGATTTCTCAGAA ACCGCCTTGTTCATCAGTCAAATCCTCATGGAAGAAAACGTTGAACAGAGTCCATTTTATGATTCACTCAGCTTGCAACT CACTGAGAAATCATTCCATGATGCTCTCATAAACCCATCTCTGTCCCCCAATCAACAACACCCCTTTGATTTTCAAAACA GTGAAACCACCACCAGCAACAGCAACAATAGCAGTAACAGTTCTCGTGAGTTGAAACCCCCTTCTCCGGATACCCCTGTT TCTGTTCTTCGTGATAATCATGATTTTCAATTCAATTCCCGTCCTTTGCATGATTTGGATTCTTCTGCTACCAATTTGTT GGCACAAGATATCTTCAATGATGCAGATTCTGTTTCCCAATTCAAGAGAGGGTTAGAGGAAGCTAGCAAGTTTCTTCCGG TGGAGCCTCGGATCGTGACCGGTCTAGACTCGAATGGACAACCGCCAAACATGCTTAGGTTGAAGAATCGAAAGCATCAT GATCGCGAAGAAGAAAGTGATTCTAAGGAAGAAGGGAGGAGAAGTAACAAGAGAGGGTTAGAGGAAGCTAGCAAGTTTCT TCCGGTGGAGCCTCGGATCGTGACCGGTCTAGACTCGAATGGACAACCGCCAAACATGCTTAGGTTGAAGAATCGAAAGC ATCATGATCGCGAAGAAGAAAGTGATTCTAAGGAAGAAGGGAGGAGAAGTAACAAGCAATCAGCATTTAGTGTTGTTGAT GAAGAAAACAATCAAGACCTATCAGAAATGTTTGATAAAGTGTTGCTTAATCTGGAACATTTGCCGCTGTGTAATGAAGT CCATGGCTCGCAGAATGGAGAAGTGAAAGCGGAGAAGGAAGGTGAAAAGGATAAGTCACCTTCAGCTAATGGAGGAGGGA AGGGTCGTCCTAAGAAACAAGGAAGGAGCAAGGAAACGGTGGATTTGAGGGCTCTTCTGCTTCTATGCTCACAAGCTGTT TACTCAAATGACAACAGGGCTGCGAATGAATTTCTAAAGCAGATTAGGGATCACTCTTCTTCCTATGGGGATGCATCACA AAGATTGGCTCATTACTTTGCCAATGGCCTTGAGGCGCGCTTGGGCGGTGATGGAACCGGCGCACAAATATTCTATTCCT CACCAAGCTCCCAGAGGATCTCTACTGCTAAGTATCTGAAAGCTTACCAAGCTCATCTAAGTACAAGCCCATTCAAAAAG TTTGCATATTTCTTTGCAAATAAAATGATTATGAAAGAAGCTGCAAAAGCAGAATCTCTTCATATCATTGATTTTGGTAT CCTATATGGTTTCCAGTGGCCAATTCTTATTAAGTTCTTATCAGAAAGAGATGGTGGACCTCCCAAATTGAAGATCACAG GGATAGAGTTCCCTTTACCCGGATTTCGGCCCACGGAAAGAATTGATGAGACCGGTCATCGTCTCACCAACTATTGCAAG CGTTTCAATGTTCCCTTTGAGTACAATGCCATTGCATCAAAGAACTGGGAAACAATTGAAGTTAAAGACCTTAGAATTCA GACTAATGAGTTTGTTGCTGTGAATTGTATGATGAGGTTCAAGAATTTGCTGGATGAGACTATTGAAGAGAACAACAGTC CTAGAGATGCTGTTCTGCAATTAATTAGGAAGATCAATCCGAATATTTTTACTCAATCAATCTCTAATGGATCTTTCAAT GCCCCTTTCTTTGTCACGCGGTTTAGGGAGGCTTTATTCCATTTTTCTGCTACTTTTGACATGTTTGACACTGTCATATC TAGGGATAACCAATGGAGGAGGTTGATTGAGAGAGAGAGTGTGGGGCGGGAGGCTATGAATGTGATAGCATGTGAAGGTT TGGAGAGGGTTGAGAGGCCTGAGACATATAAAAGGTGGCAGGTTAGGAATACAAGGGCTGGTTTCAAGCAGCTACCCCTA AATGAGGGACTAATGGACAAATTTAGGATCAAGTTAAAGAAATGGTACCATAAGGACTTTGTCTTTGATGAAGACAACAA CTGGATGCTTCAAGGTTGGAAAGGCCGCATTATGTATGCTTCCACTTGTTGGGTACCGGCTTGATGAACTCATACTAGGT ATGTATGATTCTGTGCATGTTTGGAAAACACTTCTAGAGCTATTGAATTTCAAAATTGATTCTGATGAAATAAAAGTTTG ATCCAAACATATTGTCTATCCAATTTTTTACGTCCTTCTTTTCCCATGTTAATGTTTTGAGCTATAGTCCTACTAATGTT TTGTGGTTACTTAAGAATTGAGACATTTCATCATGTATGTTGCATTGTTGAAGGCATGAAGCTTATTTTGATCTTTAAAT GGTTTCAGGTTCTGGTACTCCTTGTTACTTGATCATCAGGTGCTGTGATGAATATTCTTCAAAAGTCTTCCACCAAGTTA CTCTAGAAAATTATGTCAGAACAACTTCTCTTGTAGAATTGAGACTTGTGAGTGTAATGCTAATTCAGTAATGATAAGGA GTGTGTATTAGTGTAGGAAGGCCCTTATAGTGTTTGGCATTTTACTTCTTACCAATAAATTGATCATAGGTTTTTGCAGG ATACTTGTCTCTTGAGACATATTAGCTACTGAGTTGACAATATGTTACTAATTTGAGATGGATGAATTTGTTTAGTTATT TTTCAAGACTATCAATGGATTGATTATTGGCCTTTGATACAAATAGATTTTCAACCTGTT
CDS sequence (LotjaGi2g1v0375200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGATCCATGGTTTGCTGAAGAAGGAAGCATACTTGTCTCAGATCCAAATCAATATGCATCAGACTGGGATGCCTT TCAACAATATGAAAGCCTCTCAGCGAATTCAAACCCTGTAGAAGGTTCTGTTTCATCCATGTCCATGAACACGGTTACAG ATCCTTCACTAGAAGACACCGATTTCTCAGAAACCGCCTTGTTCATCAGTCAAATCCTCATGGAAGAAAACGTTGAACAG AGTCCATTTTATGATTCACTCAGCTTGCAACTCACTGAGAAATCATTCCATGATGCTCTCATAAACCCATCTCTGTCCCC CAATCAACAACACCCCTTTGATTTTCAAAACAGTGAAACCACCACCAGCAACAGCAACAATAGCAGTAACAGTTCTCGTG AGTTGAAACCCCCTTCTCCGGATACCCCTGTTTCTGTTCTTCGTGATAATCATGATTTTCAATTCAATTCCCGTCCTTTG CATGATTTGGATTCTTCTGCTACCAATTTGTTGGCACAAGATATCTTCAATGATGCAGATTCTGTTTCCCAATTCAAGAG AGGGTTAGAGGAAGCTAGCAAGTTTCTTCCGGTGGAGCCTCGGATCGTGACCGGTCTAGACTCGAATGGACAACCGCCAA ACATGCTTAGGTTGAAGAATCGAAAGCATCATGATCGCGAAGAAGAAAGTGATTCTAAGGAAGAAGGGAGGAGAAGTAAC AAGCAATCAGCATTTAGTGTTGTTGATGAAGAAAACAATCAAGACCTATCAGAAATGTTTGATAAAGTGTTGCTTAATCT GGAACATTTGCCGCTGTGTAATGAAGTCCATGGCTCGCAGAATGGAGAAGTGAAAGCGGAGAAGGAAGGTGAAAAGGATA AGTCACCTTCAGCTAATGGAGGAGGGAAGGGTCGTCCTAAGAAACAAGGAAGGAGCAAGGAAACGGTGGATTTGAGGGCT CTTCTGCTTCTATGCTCACAAGCTGTTTACTCAAATGACAACAGGGCTGCGAATGAATTTCTAAAGCAGATTAGGGATCA CTCTTCTTCCTATGGGGATGCATCACAAAGATTGGCTCATTACTTTGCCAATGGCCTTGAGGCGCGCTTGGGCGGTGATG GAACCGGCGCACAAATATTCTATTCCTCACCAAGCTCCCAGAGGATCTCTACTGCTAAGTATCTGAAAGCTTACCAAGCT CATCTAAGTACAAGCCCATTCAAAAAGTTTGCATATTTCTTTGCAAATAAAATGATTATGAAAGAAGCTGCAAAAGCAGA ATCTCTTCATATCATTGATTTTGGTATCCTATATGGTTTCCAGTGGCCAATTCTTATTAAGTTCTTATCAGAAAGAGATG GTGGACCTCCCAAATTGAAGATCACAGGGATAGAGTTCCCTTTACCCGGATTTCGGCCCACGGAAAGAATTGATGAGACC GGTCATCGTCTCACCAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAATGCCATTGCATCAAAGAACTGGGAAAC AATTGAAGTTAAAGACCTTAGAATTCAGACTAATGAGTTTGTTGCTGTGAATTGTATGATGAGGTTCAAGAATTTGCTGG ATGAGACTATTGAAGAGAACAACAGTCCTAGAGATGCTGTTCTGCAATTAATTAGGAAGATCAATCCGAATATTTTTACT CAATCAATCTCTAATGGATCTTTCAATGCCCCTTTCTTTGTCACGCGGTTTAGGGAGGCTTTATTCCATTTTTCTGCTAC TTTTGACATGTTTGACACTGTCATATCTAGGGATAACCAATGGAGGAGGTTGATTGAGAGAGAGAGTGTGGGGCGGGAGG CTATGAATGTGATAGCATGTGAAGGTTTGGAGAGGGTTGAGAGGCCTGAGACATATAAAAGGTGGCAGGTTAGGAATACA AGGGCTGGTTTCAAGCAGCTACCCCTAAATGAGGGACTAATGGACAAATTTAGGATCAAGTTAAAGAAATGGTACCATAA GGACTTTGTCTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTATGTATGCTTCCACTTGTTGGG TACCGGCTTGA
Protein sequence (LotjaGi2g1v0375200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTDPWFAEEGSILVSDPNQYASDWDAFQQYESLSANSNPVEGSVSSMSMNTVTDPSLEDTDFSETALFISQILMEENVEQ SPFYDSLSLQLTEKSFHDALINPSLSPNQQHPFDFQNSETTTSNSNNSSNSSRELKPPSPDTPVSVLRDNHDFQFNSRPL HDLDSSATNLLAQDIFNDADSVSQFKRGLEEASKFLPVEPRIVTGLDSNGQPPNMLRLKNRKHHDREEESDSKEEGRRSN KQSAFSVVDEENNQDLSEMFDKVLLNLEHLPLCNEVHGSQNGEVKAEKEGEKDKSPSANGGGKGRPKKQGRSKETVDLRA LLLLCSQAVYSNDNRAANEFLKQIRDHSSSYGDASQRLAHYFANGLEARLGGDGTGAQIFYSSPSSQRISTAKYLKAYQA HLSTSPFKKFAYFFANKMIMKEAAKAESLHIIDFGILYGFQWPILIKFLSERDGGPPKLKITGIEFPLPGFRPTERIDET GHRLTNYCKRFNVPFEYNAIASKNWETIEVKDLRIQTNEFVAVNCMMRFKNLLDETIEENNSPRDAVLQLIRKINPNIFT QSISNGSFNAPFFVTRFREALFHFSATFDMFDTVISRDNQWRRLIERESVGREAMNVIACEGLERVERPETYKRWQVRNT RAGFKQLPLNEGLMDKFRIKLKKWYHKDFVFDEDNNWMLQGWKGRIMYASTCWVPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 51 | 696 | 646 | 0.0 | – | |
| PANTHER | 51 | 696 | 646 | 0.0 | – | |
| MobiDBLite | 101 | 147 | 47 | - | – | |
| MobiDBLite | 101 | 138 | 38 | - | – | |
| MobiDBLite | 203 | 252 | 50 | - | – | |
| MobiDBLite | 218 | 240 | 23 | - | – | |
| MobiDBLite | 279 | 313 | 35 | - | – | |
| MobiDBLite | 281 | 298 | 18 | - | – | |
| ProSiteProfiles | 309 | 694 | 386 | 88.894 | ||
| Pfam | 318 | 693 | 376 | 1.3E-108 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0375200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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