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IPR005202

Description

IPR005202 is a Transcription factor GRAS.

<p>Sequence analysis of the products of the GRAS (GAI, RGA, SCR) gene family indicates that they share a variable N terminus and a highly conserved C terminus that contains five recognizable motifs [[cite:PUB00008372]]. Proteins in the GRAS family are major players in gibberellin (GA) signaling, which regulates various aspects of plant growth and development [[cite:PUB00008372]]. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect, loss of a ground tissue layer, in the root. The PAT1 protein is involved in phytochrome A signal transduction [[cite:PUB00008373]].</p> <p>A sequence, structure and evolutionary analysis showed that the GRAS family emerged in bacteria and belongs to the Rossmann-fold, AdoMET (SAM)-dependent methyltransferase superfamily [[cite:PUB00066769]]. All bacterial, and a subset of plant GRAS proteins, are predicted to be active and function as small-molecule methylases. Several plant GRAS proteins lack one or more AdoMet (SAM)-binding residues while preserving their substrate-binding residues. Although GRAS proteins are implicated to function as transcriptional factors, the above analysis suggests that they instead might either modify or bind small molecules [[cite:PUB00066769]].</p> <ul>Some proteins known to belong to the GRAS family are listed below:<li>Arabidopsis thaliana SCARECROW (SCR) protein. It regulates asymetric cell divisions of cortex/endodermal initial cells during root development.</li> <li>Arabidopsis thaliana SCARECROW-LIKE (SCL) protein.</li> <li>Arabidopsis thaliana GIBBERELLIN-ACID INSENSITIVE (GAI) and REPRESSOR OF GA1 (RGA), two closely related proteins involved in gibberellin signaling.</li> <li>Arabidopsis thaliana SHORT ROOT (SHR) protein. It is necessary for cell division and endodermis specification.</li> <li>Arabidopsis thaliana PAT1 protein. It inhibits light signaling via the phytochrome A (phyA).</li> <li>LATERAL SUPPRESSOR (LS), a protein from tomato that controls the formation of lateral branches during vegetative development.</li> </ul>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 163

Transcript Name Description Predicted domains Domain count
PREDICTED: scarecrow-like protein 1-like isoform 1 [Glycine max] gi|356515965|ref|XP_003526667.1| 6
PREDICTED: scarecrow-like protein 1-like isoform 1 [Glycine max] gi|356515965|ref|XP_003526667.1| 6
PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| 6
Transcription initiator for nodulation [Lotus japonicus] gi|84570611|dbj|BAE72690.1| 6
6
PREDICTED: nodulation-signaling pathway 2 protein-like [Glycine max] gi|356523346|ref|XP_003530301.1| 6
GRAS family transcription factor [Medicago truncatula] gi|357519857|ref|XP_003630217.1| 5
PREDICTED: protein SHORT-ROOT-like [Glycine max] gi|356511967|ref|XP_003524693.1| 6
PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| 5
PREDICTED: protein SHORT-ROOT-like [Glycine max] gi|356550396|ref|XP_003543573.1| 6
PREDICTED: chitin-inducible gibberellin-responsive protein 1-like [Glycine max] gi|356514974|ref|XP_003526176.1| 6
PREDICTED: scarecrow-like protein 1-like [Glycine max] gi|356552759|ref|XP_003544730.1| 6
PREDICTED: scarecrow-like protein 1-like [Glycine max] gi|356546860|ref|XP_003541840.1| 6
PREDICTED: scarecrow-like protein 6-like [Glycine max] gi|356498250|ref|XP_003517966.1| 5
PREDICTED: scarecrow-like protein 32-like [Glycine max] gi|356542103|ref|XP_003539510.1| 6
5
PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| 6
6
PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| 6
PREDICTED: scarecrow-like protein 6-like [Glycine max] gi|356506481|ref|XP_003522010.1| 6
PREDICTED: chitin-inducible gibberellin-responsive protein 1-like [Cicer arietinum] gi|502084134|ref|XP_004487630.1| 5
PREDICTED: scarecrow-like protein 14-like [Glycine max] gi|356541231|ref|XP_003539083.1| 6
PREDICTED: scarecrow-like protein 6-like [Glycine max] gi|356495143|ref|XP_003516440.1| 6
PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356541514|ref|XP_003539220.1| 6
LjNsp2 Transcription initiator for nodulation [Lotus japonicus] gi|84570611|dbj|BAE72690.1| 7
GRAS family transcription factor [Medicago truncatula] gi|357519857|ref|XP_003630217.1| 5
PREDICTED: protein SCARECROW-like [Glycine max] gi|356530141|ref|XP_003533642.1| 6
PREDICTED: scarecrow-like protein 32-like [Glycine max] gi|356514330|ref|XP_003525859.1| 5
PREDICTED: DELLA protein GAI1-like [Glycine max] gi|356503932|ref|XP_003520753.1| 5
DELLA protein GAIP [Medicago truncatula] gi|357511373|ref|XP_003625975.1| 11
PREDICTED: scarecrow-like protein 8-like [Cicer arietinum] gi|502163429|ref|XP_004512836.1| 8
PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 3-like, partial [Glycine max] gi|356541516|ref|XP_003539221.1| 6
GRAS family transcription factor [Medicago truncatula] gi|357518381|ref|XP_003629479.1| 5
PREDICTED: protein SHORT-ROOT-like [Glycine max] gi|356496989|ref|XP_003517347.1| 7
PREDICTED: scarecrow-like protein 3-like [Cicer arietinum] gi|502184152|ref|XP_004517294.1| 6
PREDICTED: scarecrow-like protein 33-like [Cicer arietinum] gi|502148476|ref|XP_004507177.1| 5
PREDICTED: scarecrow-like protein 33-like [Cicer arietinum] gi|502148476|ref|XP_004507177.1| 5
PREDICTED: scarecrow-like protein 5-like [Glycine max] gi|356553526|ref|XP_003545106.1| 5
PREDICTED: scarecrow-like transcription factor PAT1-like [Glycine max] gi|356551832|ref|XP_003544277.1| 6
PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356508428|ref|XP_003522959.1| 6
PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356508428|ref|XP_003522959.1| 6
7
PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 3-like, partial [Glycine max] gi|356541516|ref|XP_003539221.1| 6
PREDICTED: DELLA protein RGL1-like [Glycine max] gi|356554755|ref|XP_003545708.1| 6
SCARECROW-like protein [Medicago truncatula] gi|357454185|ref|XP_003597373.1| 6
6
Truncated nodulation signaling pathway 1 protein [Lotus japonicus] gi|117518700|gb|ABK35067.1| 7
LjNsp1 Nodulation signaling pathway 1 protein [Lotus japonicus] gi|117518689|gb|ABK35066.1| 8
PREDICTED: scarecrow-like protein 14-like [Glycine max] gi|356544578|ref|XP_003540726.1| 6
PREDICTED: scarecrow-like protein 14-like [Glycine max] gi|356541231|ref|XP_003539083.1| 6
SCARECROW-like protein [Medicago truncatula] gi|357472765|ref|XP_003606667.1| 6
PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| 5
PREDICTED: scarecrow-like protein 9-like [Glycine max] gi|356544570|ref|XP_003540722.1| 6
PREDICTED: scarecrow-like protein 23-like [Cicer arietinum] gi|502144367|ref|XP_004505671.1| 6
PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356538508|ref|XP_003537745.1| 7
PREDICTED: scarecrow-like protein 4-like [Cicer arietinum] gi|502144185|ref|XP_004505608.1| 7
PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356508428|ref|XP_003522959.1| 6
PREDICTED: scarecrow-like protein 13-like [Glycine max] gi|356562535|ref|XP_003549525.1| 7
PREDICTED: scarecrow-like protein 13-like [Cicer arietinum] gi|502149636|ref|XP_004507608.1| 7
PREDICTED: scarecrow-like protein 15-like [Cicer arietinum] gi|502153173|ref|XP_004509243.1| 6
PREDICTED: scarecrow-like protein 15-like [Cicer arietinum] gi|502153173|ref|XP_004509243.1| 7
PREDICTED: scarecrow-like protein 28-like [Cicer arietinum] gi|502176114|ref|XP_004515801.1| 7
PREDICTED: DELLA protein RGL1-like [Glycine max] gi|356565266|ref|XP_003550863.1| 5
PREDICTED: scarecrow-like protein 9-like [Glycine max] gi|356523159|ref|XP_003530209.1| 11
CRY [Pisum sativum] gi|113206404|gb|ABI34432.1| 10
GRAS family transcription factor [Medicago truncatula] gi|357442235|ref|XP_003591395.1| 6
PREDICTED: protein SCARECROW 1-like [Glycine max] gi|356533989|ref|XP_003535540.1| 5
PREDICTED: protein SCARECROW-like [Glycine max] gi|356574591|ref|XP_003555429.1| 5
PREDICTED: scarecrow-like protein 8-like [Cicer arietinum] gi|502119189|ref|XP_004496533.1| 7
DELLA protein [Phaseolus vulgaris] gi|148189864|dbj|BAF62637.1| 10
PREDICTED: scarecrow-like protein 5-like isoform X1 [Cicer arietinum] gi|502146968|ref|XP_004506678.1| 6
PREDICTED: protein SCARECROW-like [Glycine max] gi|356545886|ref|XP_003541364.1| 6
PREDICTED: DELLA protein RHT-1-like [Cicer arietinum] gi|502149683|ref|XP_004507626.1| 5
PREDICTED: scarecrow-like protein 9-like [Glycine max] gi|356523159|ref|XP_003530209.1| 11
PREDICTED: scarecrow-like protein 13-like [Glycine max] gi|356555748|ref|XP_003546192.1| 7
PREDICTED: DELLA protein RGL2-like [Glycine max] gi|356532515|ref|XP_003534817.1| 5
PREDICTED: DELLA protein RGL2-like [Glycine max] gi|356532515|ref|XP_003534817.1| 5
GRAS family transcription factor; TAIR: AT5G48150.1 GRAS family transcription factor; Swiss-Prot: sp|Q9LDL7|PAT1_ARATH Scarecrow-like transcription factor PAT1; TrEMBL-Plants: tr|V7BDE6|V7BDE6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0008400 6
GRAS family transcription factor; TAIR: AT5G48150.1 GRAS family transcription factor; Swiss-Prot: sp|Q9LDL7|PAT1_ARATH Scarecrow-like transcription factor PAT1; TrEMBL-Plants: tr|V7BDE6|V7BDE6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0008400 6
GRAS family transcription factor; TAIR: AT5G48150.1 GRAS family transcription factor; Swiss-Prot: sp|Q9LDL7|PAT1_ARATH Scarecrow-like transcription factor PAT1; TrEMBL-Plants: tr|V7BDE6|V7BDE6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0008400 6
GRAS family transcription factor; TAIR: AT1G50600.1 scarecrow-like 5; Swiss-Prot: sp|Q8H125|SCL5_ARATH Scarecrow-like protein 5; TrEMBL-Plants: tr|A0A0B2QQN2|A0A0B2QQN2_GLYSO Scarecrow-like protein 5; Found in the gene: LotjaGi1g1v0019600 5
GRAS family transcription factor; TAIR: AT1G50600.1 scarecrow-like 5; Swiss-Prot: sp|Q8H125|SCL5_ARATH Scarecrow-like protein 5; TrEMBL-Plants: tr|I3S752|I3S752_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0020000_LC 5
Nodulation signaling pathway 2 protein; TAIR: AT4G08250.1 GRAS family transcription factor; Swiss-Prot: sp|Q5NE24|NSP2_MEDTR Nodulation-signaling pathway 2 protein; TrEMBL-Plants: tr|G7K8U7|G7K8U7_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi1g1v0155100 7
GRAS family transcription factor; TAIR: AT1G21450.1 SCARECROW-like 1; Swiss-Prot: sp|Q9SDQ3|SCL1_ARATH Scarecrow-like protein 1; TrEMBL-Plants: tr|A0A072VGC8|A0A072VGC8_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi1g1v0167100 6
DELLA protein GAI; TAIR: AT1G14920.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q9LQT8|GAI_ARATH DELLA protein GAI; TrEMBL-Plants: tr|I1KD93|I1KD93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0201900 11
Nodulation signaling pathway 2; TAIR: AT4G08250.1 GRAS family transcription factor; Swiss-Prot: sp|Q5NE24|NSP2_MEDTR Nodulation-signaling pathway 2 protein; TrEMBL-Plants: tr|Q2PEG7|Q2PEG7_LOTJA Nodulation signaling pathway 2; Found in the gene: LotjaGi1g1v0257100 7
GRAS family transcription factor; TAIR: AT1G21450.1 SCARECROW-like 1; Swiss-Prot: sp|Q9SDQ3|SCL1_ARATH Scarecrow-like protein 1; TrEMBL-Plants: tr|A0A151TS87|A0A151TS87_CAJCA Scarecrow-like protein 1; Found in the gene: LotjaGi1g1v0272100 5
GRAS family transcription factor; TAIR: AT1G21450.1 SCARECROW-like 1; Swiss-Prot: sp|Q9SDQ3|SCL1_ARATH Scarecrow-like protein 1; TrEMBL-Plants: tr|A0A151TS87|A0A151TS87_CAJCA Scarecrow-like protein 1; Found in the gene: LotjaGi1g1v0272100 5
GRAS family transcription factor; TAIR: AT1G21450.1 SCARECROW-like 1; Swiss-Prot: sp|Q9SDQ3|SCL1_ARATH Scarecrow-like protein 1; TrEMBL-Plants: tr|A0A151TS87|A0A151TS87_CAJCA Scarecrow-like protein 1; Found in the gene: LotjaGi1g1v0272100 5
GRAS family transcription factor; TAIR: AT3G60630.1 GRAS family transcription factor; Swiss-Prot: sp|Q5NE24|NSP2_MEDTR Nodulation-signaling pathway 2 protein; TrEMBL-Plants: tr|A0A0B2S1W8|A0A0B2S1W8_GLYSO Nodulation-signaling pathway 2 protein; Found in the gene: LotjaGi1g1v0444900 6
Scarecrow transcription factor family protein; TAIR: AT3G54220.1 GRAS family transcription factor; Swiss-Prot: sp|Q9AVK4|SCR_PEA Protein SCARECROW; TrEMBL-Plants: tr|V7B559|V7B559_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0461700 6
Scarecrow transcription factor family protein; TAIR: AT4G00150.1 GRAS family transcription factor; Swiss-Prot: sp|O81316|SCL6_ARATH Scarecrow-like protein 6; TrEMBL-Plants: tr|A0A0L9U614|A0A0L9U614_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0601800 6
Scarecrow transcription factor family protein; TAIR: AT4G00150.1 GRAS family transcription factor; Swiss-Prot: sp|O81316|SCL6_ARATH Scarecrow-like protein 6; TrEMBL-Plants: tr|A0A0L9U614|A0A0L9U614_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0601800 6
DELLA protein; TAIR: AT1G66350.1 RGA-like 1; Swiss-Prot: sp|Q8S4W7|GAI1_VITVI DELLA protein GAI1; TrEMBL-Plants: tr|A0A145P7T2|A0A145P7T2_LOTJA RAM1 GRAS protein; Found in the gene: LotjaGi1g1v0628300 6
DELLA 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q8S4W7|GAI1_VITVI DELLA protein GAI1; TrEMBL-Plants: tr|A0A151RYG0|A0A151RYG0_CAJCA DELLA protein RGL1; Found in the gene: LotjaGi1g1v0759300 5
GRAS family transcription factor; TAIR: AT5G52510.1 SCARECROW-like 8; Swiss-Prot: sp|Q9FYR7|SCL8_ARATH Scarecrow-like protein 8; TrEMBL-Plants: tr|I1MPJ5|I1MPJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0122500 8
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|A0A0R0HGV4|A0A0R0HGV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0374500 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374500 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374600 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.1 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374600 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374700 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.1 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374700 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.1 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374700 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374700 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.1 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374700 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.1 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374700 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374700 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0374700 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.2 GRAS family transcription factor; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375100 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.2 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375100 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.2 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375100 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.2 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375100 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375200 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375200 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375200 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.1 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375300 6
Scarecrow transcription factor family protein; TAIR: AT2G29060.2 GRAS family transcription factor; Swiss-Prot: sp|P0C884|SCL34_ARATH Scarecrow-like protein 34; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375400 6
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|K7LTB4|K7LTB4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0375500 6
Scarecrow transcription factor family protein; TAIR: AT4G36710.1 GRAS family transcription factor; Swiss-Prot: sp|O23210|SCL15_ARATH Scarecrow-like protein 15; TrEMBL-Plants: tr|V7CFI5|V7CFI5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0392700 6
Scarecrow-like transcription factor 3 family protein; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|G7K9A5|G7K9A5_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0443200 6
GRAS family transcription factor; TAIR: AT4G37650.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SZF7|SHR_ARATH Protein SHORT-ROOT; TrEMBL-Plants: tr|A0A0L9UPC5|A0A0L9UPC5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0031100 6
GRAS family transcription factor; TAIR: AT5G48150.1 GRAS family transcription factor; Swiss-Prot: sp|Q69VG1|CIGR1_ORYSJ Chitin-inducible gibberellin-responsive protein 1; TrEMBL-Plants: tr|I1KEE1|I1KEE1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0094800 6
GRAS family transcription factor; TAIR: AT1G50600.1 scarecrow-like 5; Swiss-Prot: sp|Q69VG1|CIGR1_ORYSJ Chitin-inducible gibberellin-responsive protein 1; TrEMBL-Plants: tr|I1KEE1|I1KEE1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0094800 6
GAI-like protein 1; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7BSM2|V7BSM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0115500_LC 5
GAI-like protein 1; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|A0A151TM06|A0A151TM06_CAJCA Scarecrow-like protein 3; Found in the gene: LotjaGi3g1v0115500_LC 5
GAI-like protein 1; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7BSM2|V7BSM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0115500_LC 5
GRAS family transcription factor; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7BSM2|V7BSM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0115700_LC 5
GRAS family transcription factor; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7BVF7|V7BVF7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0115800 5
GRAS family transcription factor; TAIR: AT3G49950.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SN22|SCL32_ARATH Scarecrow-like protein 32; TrEMBL-Plants: tr|A0A151RP29|A0A151RP29_CAJCA Scarecrow-like protein 32; Found in the gene: LotjaGi3g1v0193300 6
Scarecrow transcription factor family protein; TAIR: AT3G49950.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SN22|SCL32_ARATH Scarecrow-like protein 32; TrEMBL-Plants: tr|G7IRJ4|G7IRJ4_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi3g1v0193300 6
Scarecrow transcription factor family protein; TAIR: AT4G00150.1 GRAS family transcription factor; Swiss-Prot: sp|O81316|SCL6_ARATH Scarecrow-like protein 6; TrEMBL-Plants: tr|I1JKU2|I1JKU2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0206600 6
Scarecrow transcription factor family protein; TAIR: AT2G37650.1 GRAS family transcription factor; Swiss-Prot: sp|O80933|SCL9_ARATH Scarecrow-like protein 9; TrEMBL-Plants: tr|I1JLK0|I1JLK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0225900 6
Scarecrow transcription factor family protein; TAIR: AT2G37650.1 GRAS family transcription factor; Swiss-Prot: sp|O80933|SCL9_ARATH Scarecrow-like protein 9; TrEMBL-Plants: tr|I1JLK0|I1JLK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0225900 6
GRAS family transcription factor; TAIR: AT1G50600.1 scarecrow-like 5; Swiss-Prot: sp|Q69VG1|CIGR1_ORYSJ Chitin-inducible gibberellin-responsive protein 1; TrEMBL-Plants: tr|G7ITP3|G7ITP3_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi3g1v0233300 5
Scarecrow transcription factor family protein; TAIR: AT1G07530.1 SCARECROW-like 14; Swiss-Prot: sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14; TrEMBL-Plants: tr|A0A1J7HCD4|A0A1J7HCD4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0284300 7
Scarecrow transcription factor family protein; TAIR: AT2G29060.2 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|A0A0B2RNF8|A0A0B2RNF8_GLYSO Scarecrow-like protein 33; Found in the gene: LotjaGi3g1v0284500 6
Nodulation signaling protein 1; TAIR: AT3G13840.1 GRAS family transcription factor; Swiss-Prot: sp|Q4VYC8|NSP1_MEDTR Nodulation-signaling pathway 1 protein; TrEMBL-Plants: tr|A1DQP9|A1DQP9_LOTJA Nodulation signaling pathway 1 protein; Found in the gene: LotjaGi3g1v0414350 7
GRAS family transcription factor; TAIR: AT3G49950.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SN22|SCL32_ARATH Scarecrow-like protein 32; TrEMBL-Plants: tr|A0A151RP29|A0A151RP29_CAJCA Scarecrow-like protein 32; Found in the gene: LotjaGi3g1v0430400 6
Scarecrow transcription factor family protein; TAIR: AT3G49950.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SN22|SCL32_ARATH Scarecrow-like protein 32; TrEMBL-Plants: tr|G7IRJ4|G7IRJ4_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi3g1v0430400 6
Scarecrow transcription factor family protein; TAIR: AT5G41920.1 GRAS family transcription factor; Swiss-Prot: sp|Q9FHZ1|SCL23_ARATH Scarecrow-like protein 23; TrEMBL-Plants: tr|A0A0L9V7R6|A0A0L9V7R6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0533800 6
GRAS family transcription factor; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7ADC7|V7ADC7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0534500 7
GRAS family transcription factor; TAIR: AT5G66770.1 GRAS family transcription factor; Swiss-Prot: sp|Q9FL03|SCL4_ARATH Scarecrow-like protein 4; TrEMBL-Plants: tr|G7JSQ4|G7JSQ4_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi3g1v0543100 7
GRAS family transcription factor; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7AHA1|V7AHA1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0545500 5
GRAS family transcription factor; TAIR: AT4G17230.1 SCARECROW-like 13; Swiss-Prot: sp|Q9M0M5|SCL13_ARATH Scarecrow-like protein 13; TrEMBL-Plants: tr|A0A151SU72|A0A151SU72_CAJCA Scarecrow-like transcription factor PAT1; Found in the gene: LotjaGi4g1v0007900 7
GRAS family transcription factor; TAIR: AT4G37650.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SZF7|SHR_ARATH Protein SHORT-ROOT; TrEMBL-Plants: tr|K7KPG8|K7KPG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0094600 7
GRAS family transcription factor; TAIR: AT3G49950.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SN22|SCL32_ARATH Scarecrow-like protein 32; TrEMBL-Plants: tr|I1K2B9|I1K2B9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0096500 5
GRAS family transcription factor; TAIR: AT3G49950.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SN22|SCL32_ARATH Scarecrow-like protein 32; TrEMBL-Plants: tr|I1K2B9|I1K2B9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0096500 5
Scarecrow transcription factor family protein; TAIR: AT1G63100.2 GRAS family transcription factor; Swiss-Prot: sp|Q9CAN3|SCL28_ARATH Scarecrow-like protein 28; TrEMBL-Plants: tr|A0A072URL3|A0A072URL3_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi4g1v0220700 7
Scarecrow transcription factor family protein; TAIR: AT1G63100.2 GRAS family transcription factor; Swiss-Prot: sp|Q9CAN3|SCL28_ARATH Scarecrow-like protein 28; TrEMBL-Plants: tr|A0A072URL3|A0A072URL3_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi4g1v0220700 7
DELLA protein; TAIR: AT1G66350.1 RGA-like 1; Swiss-Prot: sp|Q9C8Y3|RGL1_ARATH DELLA protein RGL1; TrEMBL-Plants: tr|A0A1B1WAJ0|A0A1B1WAJ0_LOTJA Required for arbuscule development 1; Found in the gene: LotjaGi4g1v0224000 5
GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q5BN23|RGA1_BRACM DELLA protein RGA1; TrEMBL-Plants: tr|B2BA71|B2BA71_PEA CRY; Found in the gene: LotjaGi4g1v0359300 13
GRAS family transcription factor; TAIR: AT4G08250.1 GRAS family transcription factor; Swiss-Prot: sp|Q5NE24|NSP2_MEDTR Nodulation-signaling pathway 2 protein; TrEMBL-Plants: tr|G7LD66|G7LD66_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi4g1v0407600 5
Scarecrow transcription factor family protein; TAIR: AT3G54220.1 GRAS family transcription factor; Swiss-Prot: sp|Q9M384|SCR_ARATH Protein SCARECROW; TrEMBL-Plants: tr|A0A151U4G7|A0A151U4G7_CAJCA Protein SCARECROW; Found in the gene: LotjaGi5g1v0156700 6
GAI-like protein 1; TAIR: AT3G46600.1 GRAS family transcription factor; Swiss-Prot: sp|Q9SNB8|SCL30_ARATH Scarecrow-like protein 30; TrEMBL-Plants: tr|A0A0L9TYS2|A0A0L9TYS2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0244200_LC 5
GRAS family transcription factor; TAIR: AT3G54220.1 GRAS family transcription factor; Swiss-Prot: sp|Q2RB59|SCR1_ORYSJ Protein SCARECROW 1; TrEMBL-Plants: tr|A0A0L9TYV8|A0A0L9TYV8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0278600 5
GRAS family transcription factor; TAIR: AT5G52510.1 SCARECROW-like 8; Swiss-Prot: sp|Q9FYR7|SCL8_ARATH Scarecrow-like protein 8; TrEMBL-Plants: tr|V7BC54|V7BC54_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0297200 7
GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600 12
GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600 12
GAI-like protein 1; TAIR: AT3G03450.1 RGA-like 2; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600 6
GRAS family transcription factor; TAIR: AT1G50600.1 scarecrow-like 5; Swiss-Prot: sp|Q8H125|SCL5_ARATH Scarecrow-like protein 5; TrEMBL-Plants: tr|A0A151S4X1|A0A151S4X1_CAJCA Scarecrow-like protein 5; Found in the gene: LotjaGi6g1v0149200 6
GRAS family transcription factor; TAIR: AT1G50600.1 scarecrow-like 5; Swiss-Prot: sp|Q8H125|SCL5_ARATH Scarecrow-like protein 5; TrEMBL-Plants: tr|A0A151S4X1|A0A151S4X1_CAJCA Scarecrow-like protein 5; Found in the gene: LotjaGi6g1v0149200 6
DELLA protein; TAIR: AT1G66350.1 RGA-like 1; Swiss-Prot: sp|Q9C8Y3|RGL1_ARATH DELLA protein RGL1; TrEMBL-Plants: tr|A0A151R2H4|A0A151R2H4_CAJCA DELLA protein RGL2; Found in the gene: LotjaGi6g1v0258000 5
GRAS family transcription factor; TAIR: AT4G17230.1 SCARECROW-like 13; Swiss-Prot: sp|Q9M0M5|SCL13_ARATH Scarecrow-like protein 13; TrEMBL-Plants: tr|I1MFQ0|I1MFQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0284700 6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 0.61