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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0421900 |
Transcript ID | LotjaGi2g1v0421900.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Aquaporin; TAIR: AT5G47450.1 tonoplast intrinsic protein 2;3; Swiss-Prot: sp|Q9FGL2|TIP23_ARATH Aquaporin TIP2-3; TrEMBL-Plants: tr|I3S680|I3S680_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0421900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91981756..91994054) extracted from Lotus japonicus Gifu genome v1.2.
AATGTTTCTGATGCAAAGCATACACTTATAGCTTTGGCTCCTCTGTTTTGAATTGGTGTGTGTCAAAAATGGTGAAGATA GCTTTTGGTAGATTTGATGACTCTTTTAGCGTTACCTCCCTTAAGGCTTATCTAGCAGAATTCATTGCCACTTTACTTTT CATCTTTGCTGGCGTTGGATCAGCCATCGCTTACAGTAAGTACAACTGGAGTACCATTTTAAAACCGATTCATTGATGAA CCATCATGTTTAATCATATGACAGACAAATATGATGATTCACTAGTGAGACCAATTTTATATTAATTTGTTTCATATATA ATATTAATTTTTAAAGTTAATATCAGTTTAATCACAATTGATCTATTGAACCGTGAATTAGTGGCATCAACATTTTAATT ACCATTTGGTTTTTAAAACATTGCTTTTCATTCATTGTATGGGTCTTAAAACTAGTATTTGATACAAGGGTGCAAAGAAT GATGAAATAGTTCTGTTGTGTTATATAGATGAGCTTACATCGGACGCAGCATTGGATCCAACGGGTCTGGTTGCAGTTGC TTTGGCCCATGCATTTGCACTATTTGTAGGCGTGTCCATTGCAGCCAACATCTCAGGCGGCCATTTGAACCCTGCTGTCA CACTTGGATTGGCGGTTGGAGGAAACATCACCCTCCTCACCGGTTTCTTTTACTGGATTGCTCAATTGCTTGGCTCCATT GTCGCATGTCTCCTCCTCAATTTTATCACCTCCAAGGTATTAAAGGAAAATTTCTTAAAAACACTAATTGGTTTTATCTC CTTTAGAGTTATCACTAGAAAAAATTATATCTCTCAAATTAGACTATCCGGATTATAAAATTTATCATAAATTTTATGAA ATGATCTACTTTGGGATTTATTGGCAGAGCATTCCAACTCATGGACTAGCTTCTGGAGTGAACCCTGTTGGAGGTGTGGT GTTCGAGATTATTGCAACTTTTGGATTGGTTTACACTGTTTATGCCACTGCAGTTGATCCCAAAAAGGGTTCATTGGGTA CCATTGCACCTATCGCTATTGGGTTCATAGTTGGTGCCAACATCTTAGCCGCTGGGCCGTTCAGTGGCGGGTCGATGAAC CCAGCCCGATCATTTGGTCCAGCTGTGGTTAGTGGAAACTATGTTGATATCTGGATCTATTGGGTTGGCCCATTAATTGG AGGAGCCTTGGCTGGGTTGGTTTACGGTGGCGCTTTCATTTGTCCCCATCACCCCATCCCGACCTAAGAAACCTACCCTT AAATGAAATTGTTCTTGCCATGAATTGTTCAACTGTTTGCTGCCTTAAACCTCTTATTTCTCTTGGCTCTTTTTTTTTCC TGGTTTTAAAAAGTTGTATCTTTAATTATTTGTAAGTATTTGTTGCTTGTAATAAAACTGTAAAAAAATGATGCATGTTG TTTTGATTTTTGAAGGCCCTTTGACCCTTTTTTTTTACATGGAAAATTTTCTCGGGCGGGGTGGGCAGCTCACATGGTTG AGTTAAGGGTAATTGCAGGTGAAAGACCAGAGTTCGAACTCTGAAGAGACATAATTTCTACTAATTTACTACATTTTCCT ATCAAAAAAATAAATATGGATAATTTTTTCACGTGGACATAATATGTACATTTGTCTCGAGTGACTGAAAGCTGAATCCG TGTAAATGCGAGGACATAAGTTCAAATGTCAAAAAATCACATGTTAGGAGGGACTGTCATGACTTTCTGAACAAGTTTAT ATTTGTCAAAGATTAGAAAAATCACTTTGCACTATGGATGGCAAAATGGGGATTAAATTTTTTTATATGGACGTAATTAG ATTCCTATTTAAAATTCAAAAGTGAGAGACTAAAACAATGTGTTCATGAATCATGAGCTTATGTTTTTTTTTTCTTTAGT AAATGAGCTTCTTCTTCTTTTTTTTTTTTTGGGTCAAAGATTGATGATTCATTGATAAAGGGCCAAACCCAAAGGCTTAG AAGCCAAGTACAAATCAGCCTTTTCTACAGAAACCCACAAAAGCCTAAACAAACAATACAAAGCCACGGGTCTGCTAGCT GGTACCAGCAAGTGAAAAAACAAAGCGTTTGGAATGGGAAAAAGCAACTAGTACATTAAGGGTCATCAGTAGACAATAGA AAAAAAGCACTTAACCAGCCATGAGACTAAAGGCATAAAAAACAGAAAAGAGGGACCCGCCATGTGACAATACTTGGGTA GGTGGCCACCATTCAAACTACCAATAAGGACCACAATGAAGGCAATTGAATAAAGATAGTTTCAGTTGCCAAGAAAAAAG AGTTAGACAACAGGCTAAGGGAATCTGTCAGTGCAAGTAGAACAGCTCCAAACACTCATCTTCATCTCTGAAATCACATA AGAGAGAAGGGGGATCAAAGCACAACAATTGAAGGCCCAGTACCGCATTCAGCCACAGGGATGAAACACTAGAAAAATTG CTGAAACTAGATCAGATTGGGACTCTTGGAGGGATTAACCTTGCATCATGTATTACTGCAGATTTCACTGCTGGATGAAG AGAAAAAAGCCAGTAGGGCCCCAGATCATTAAGGTAGTTCAGCTTAGCAATTTCATGGGCAACCTTGTTGCTGTTCCTAG GAATCCACGAAAAACCACACCATTGGAAATGTCTTCTCAGGTTAAGAATATCTGCAACTATGCTGTGGATTTCACCTTGT CCCTTTCCATCCCTGCATGCCTCAACCAAAGGTAAGCAATCTGATTCCACTTCAATTTCTGACCATCCCATGTTATGAGC TAGAATAATTGCTTCCCTAAATGCTAAAGCTTCTGCCATCAGGGCTGAATGAGAAAAAGCTTTGGAAGCTGATCCAGCAA CGAGAAGCCCAGCTTCATCTCTCACAGCGATGCCAATAGAACACAAAGGGGAAGAGGCTTTCCAGCTTGCATCAACATTC AATTTAAGCATCCTAGGTAAAGGGGGTCTCCACGGACGATCATTGAAGGTAGAGCGATCTGAACTCATTCTTTCTTTAAT AATCACTGGCTTAGTATTTGATAAATTATGGATCAAGAGTGACAGTTGTCTAATAGTAGCTTCAGTGTTTGGCGCTTCAT GTTGGAAAATAACCCTGTTTCTCCCCTTCCAAATAGCCCAAAGAGTGAGGCTAAAGATGGCAAAGTCCTCCTCAGCGTGG GTTGAGACTGAATTTAGGAAATTGAATTGTTGTAGGATCCAAAGATCCATCCTCTGAAATCCCACTCTATTAATAATCCA TTGGAGAGGAGAACCGAACCAAGCCGCACAAGTCCAAGGGCAAAATAGCAGTGCATGCTCAATTGTCTCATCCTCCATAT TACATATTGGGCAAGTACTCTCCCTCGTCATATTCCTCCTGTGAAGATTAGCTAACACAGCAACAGCGTTGCTACAGATT TTTCAGAGGAAGGTTTTCACCTTCTGTGGAGTATCGCACCCCCATATGAACCCCCATAATTCATTAGGAATCACCAGAGA GGAAGATGGATTAAGAATACTTTCCTGGCAGAATGATCTTGCAACATGGTACCCTGTTTTAATGGTATACTCTCCCGAGT TGGTATGAGGCCAAATTAAGCTATCTTCAACTCCTCTTAGCCCCACCGGCGTTTGTAGGATCTTGACTGCAACGGGAGGT TCAAACATAGTTTTAATTTGGGAATTAGATTTCCCACCCCTGTTTTAGATTTCCCACCCCATTTAAAAGTGGGGAAAAAC CAATATTGCCCCTCCGTGTTTTAGTCCGAAACTTCAACCTTCGGATCAGTACGAAACTTCATCCTTCGGATTAGTATGAA ACTTCAACTTCTGGACACCTCTGACAGATTCTACCACCTTTTTCAGCACCATTACTCCATAGCTTCACCTACCTCACCAC CATTATGGCCTGCATAAACTCCTCAACCACCCCCCATTTATGGCTGAACACACTGTTTGGATTGGTCCTCGTGTTATTAC CAACTTTGATTTAACAGACATAACAGAAGATTGATAATATGATTCATGTTTGTAATGTTGTAACCATGTCTGTAACCATG TCTGTAACCATATTATTAGCAAGAATATTTTCCTTCAGTATTGTAACGAGGTCTGTTTGTCCCATATTATTGTCACTGCA TTTTCACGTTTCTGTCTTTGTGACAGTATCTGGTTTGAAAGATCCGAATCTTGAAGTTTCATATTAATCCGGTTTTTCAA CTCTCGGACATCTAAAAAAGGGGGGTGGTAAATTTAATTATGAAGCAGTCTGAAACTTATAGTCCTGGATTGATCCGAAA CTTAAAGTCCTGGATGGATCCGAAACTTAAAGTCCTGGATAGATTCGAAACTTAAAGTCCTGGATAACTCTTACCAAGCA GCAGAATGCAGTAAGTTAAGACCAAACCAAAAGGCATATTCATCAATTACAATCTCAACCACCACCACAATTACAAACCA AACATTTCAACCCAACAATTCGTTAGGCAAGTCCTCCAAGACGGCCACGACACCGATCATGTTATTTTAACTGTAACTAA AGAATCCGAACTTTTAACTCTCGGACTAGTCCAGAACATCAACCTCTGGACTGGTATGGAGGTTTAAGTCCCGGAGGGTA GTCCCGACATTTTTTTAAAAAGGCTAGGGTGGCAATTCTAAAACAGGGGGTGGGAAATCTAATTCCCTTTTAATTTTCAA GCAATCCCAACCATCCCCTGATTCCTTGAGTAACTCAGCAACCTTTAATGGGGGAGTGTTCTGGCTGCGGGCAAGTCTTT CCCCTGTCCAGATCCAGCTATCTTCCCAAACATTAATTTTCTCTCCTGTACCAATTGCCCATCTTCCTCCAGAATTCAAG AGATCTCTACCCTCTAAAAGACTCGTCCACATCCAAGACTGGTTCCTACCCTTCTTCTCCTCAAGGAAATTCCCATTGGG ACAGTAGATGGCCTTTAGTACAGTAACCCACAATGCATTAGGAGAGTGTTCGAATCGCCACGCTTGTTTTGCTAGATAAG CCAAGTTTTGATAGTGGAAGTCCCGGAAGCCAAGACCTCCTTCCTTTTTGCTCCTTGAAATGTGCTGCCAGCTTCTCCAA TGAACTCCCCTCTCTTTCCCTTGGCTCTTCCACCAAAATTTTGCCACTGCTGCATTAAGGGATGAGGTAAAGGTTTTTGG AAATTTAACTATCGCCATCGCAAAAGTTGGGATTGCTTGGATAACAGATTTAACAAGAACTTCTTTCCCTGCTTGGTTAA GTAAAGATCCTTTCCAGCTCTCCATCTTCCCCAAGATTTTATCCTTTATCCACATCAAGGAAGCAGTCCTATTTCTCCCC CAAATGGCTGGAAGGCCCAAATACTTGCCTGGATCTGCCCAGATTTCCATCTTTAGAATGGTACGGATCTGTGTTCTCTT GGGGGCTGATAAGTGATAGCTTCAAATGACATCTGACTTAGCTGTATTAACTCTTTGTCCGGATGCAATAGAGAAAATAT TTAAGATCTCCAGAACTTGGTACAACTCTTGTGGATGAGCTTTAGCAAACAAAAGTGAATCATCTGCAAAAAACAAGTGG GTGAGACTAGGTGCTGTGGGAGCAAGTTTGATACCTTCTAGTTTCCCCTCTGTTTTGGCCTTCAATAACATGTGAGATAA AACATCTGCCGCCAGCACAAAGAGATATGGTGATAGTGGGTCACCTTGCCTAAGGCCCCTCTCAGGAGTAAGCCTCTCAC TAAGATACCCATTAACTTTATAATTGTATGTCACTCCTCTAACAATAGTCATGACTTGTGTTATCCATGTTGGGTGGAAT CCATAGGCAGCAAGGCATTTCTCAAGGAAATTCCACTCAAGCCTGTCGTAAGCTTTGCTAAGGTCAAGTTTAATAGCAAT ACAGTCCTTTAGGTCCCCGCCTCTATGTTGGAGGCCATGGAAAACCTCCTGAGCAATGAGGATATTATCCTGAATGAGCC GTCCCCCCACAAACGCACTTTGGTTAGGTGTGATCAACCCATTTAATGCAGTCTTCAGTCTAGTCACCATTATACGAGAG ATCATCTTCAGGAGAAAATTGCAGCAACTGATCGGGCGAAATTGAGAGACATTCTCTGGGTCTAAGATTTTTGGAACAAG AGCAACTACCGTTTCATTCACCTCTGAAGGTAGCTCACCACGTTTAAAGAAAGCTGAGATAGCATCACAAACATTATCTT TAATTGTTTCCCAGTGACTTTTGAAGAAGAGGCCATTAAAACCGTCTGGGCCTGGTGCTTTTAAGCTGCCCAGATTATTC AAAGCTTCAACAATTTCTGCCTCACTAGTTTCTTCAATTAGGAGTCTATTCAGACCTGCTGTAACTTTCCTGGGGACAGC TTCTAGACAATTTTCTACCATGTGTACCCCATCAGACTTGTAGATTTCCTTGTAGTGAGCAAGGAAAGCGTTCATAACGT TGTTCTGCCCTTCTACCCAGTTCCCATCATCACTCTTGAGCCTGACCAACCTGTTTCTGTTACGACGCTGAATGGTAGTA GCGTGGAAGAATTTGGTATTTTTATCTCCAAATTGATTCCAATTCAGCCTAGATCTTTGACTCCAGTAGAGTTCTTCTTG CCTCCATAGCTCTTTGATCTTGGCTTTTAAGCCATGTACTTTCTCCCAATTAATGTCCTTGTGAGCTTTATCTAATTCCA ATTGGACTTCAGCTTTTGCACCCTGAATTTCCTTGTCTGCTACCCCAAAAGTTTTTCGCTGCCAGACTAAGAGTTTGCTT CTGCTTGCCATTAATCCATGTGAGAGATTTCTCCACGCGTTAAATCTGCCATTAATGCTATCCCAGCCCTCCTTCACAAC TCCTTTGCAATCAGTATGCTCATCCCAATAGATTTCATACTTAAACTGTTTCCCGCTTCTGGTACTAGGCAGAGGTTGCA AATAGACTGGGGAGTGATCTGAAGAGATGGAAGGATAAGCAATAGCTGTTGCATTTGGGAAGAGGGACCTCCATTCCCAG TTGGCAAGGACCCTATCTATTCTCTCTCTGGTCACAACGCCCTCTCTAGGATTACTAAACCAGGTGAACTTGCTGCCCTT TAATTCAAGATCCATCAGATTCGAATTTTGCAAGAATTCCCTGAATATGCGTATTCTAGAAGCTTGAGCTGGCCTTAATC CTTCCTTCTCATAGGGGAATAAAATTTCATTAAAATCTCCCACACAACACCAAGGAATTGAGTGGCCCTGAACTAGATTT GAGATAGTGTGCCAAAGTATTCTCCGTCTCTGAGGATTGGGGTCTCCATAGGTGAAAGTACATTCCCACGAGCTGGGATC ATCTCTAGATGAGATCACTGAGTGAATAAAATTCTGAGTATGTTCTACCACCTCCAACTCCACATTATCTGACCAGAAGA GAGCTAATCCTCCAGACAGTCCAACTGGTTCCACAACAAAACAGTGTGTAAATTTTAGACTAACTTTTATGGTTTCAATT CTGTTCCTCCTTGCTCGTGTTTCCATGAGGAACAGAATCGACGGCTTGTGCTTAGTGACCAGCTCCCTAAGCTCATTCCT GGTCGGGGTCGCCGCCACTCCCCGACAATTCCAACAGAGTGTATTCATGGCCCCTTAGGGGGCAAGTTTTGGCTCGCCTC CTCAGCCTCTGTAACATTAAGTTCAACAATTTTCCTTTTAACTTCCATCCTCCTCTTCTTTGCTTCACATTGATCCATTG TTATTATTTCTGCCCTCCCAGTGTTCTCCCTTGCTCTCTTCAGGGTTAGCCCGCTCTCAAGCCCCGTAGCTAGTAATTGT TCACATCTTGGGCTTAGTTGGTTGGGATTCAGACTTTGCTCCTCATCATCATCATCACTTGGAATTTCTACTGTGTAATG TTTAGTTACATAAATGCTTCGGGGGATCCTTCTGAAGGTTCTGATGTTGTAAGGGGCAATGCCACCTGTTTGAGTGGAAG TGCAGGGAGCTGTGCTTGGGGACACTTGATCAACAGTAGCATATGTAGGTTGGACTATATTCACTGGATTACCATACCAC TCCATCATATTAGCTGGTCTATTGGTAAGGACAGCTTGGGAGAAAAGAGGGGCGTGTTCCATACCCTGAGCTTTCATAAT TTCTGCATTCCTAGCTCTCATACCAAATTCCCCTAGGTCAGCATTTATCTGGGCAACTCTTAACTTTGACCTCTGAATGG CCTCATTTGAGAGGTTACTACCATATTCGTCTATTTCTTGTTCTTCTTCAGTGCTGGAAAGCTGGTTTTGGTTAGTAGTG ACCTCATCACCCACTAGCCTTTGGCTGAATCTGAGGGGGTAAACAGGGGGCATATCACTTTCTCTTCTCAGTTCAGATGT GTCTTCTCGATAAATTTCAGAAGGAGAGAAGCCATGTAATTCCGCTATAAGATTTGGGGAGCGAGGTCTTTCCTCCTCCG GTTCCGGGTCAAAATATTCAGGGGATTCAGCTCTCAGAGAATGAGTATCTCTTTCCACCTCCATGTTATGTGTTTCCTCG TTCTGTCTTATTGTATTATCCTCAGGGGTTTGTTGGTTTTGTGGAGCATCAGTGCTTTGAGCTTTTTCGCTTGTGTTCTC AGCAGATACTACAAAGCCTCTTGGTTTCGAGCCCAGCTTCGCCTTCCAGTAAGCAAGTTCCGCATCTTCAACAGAACCTC CTTGTTGTTCTTTCTGAGGATTTGCTTTATCTCCCTCTTTCCCTTGTGTGGAGCTTCCTGCAGCTAGGCTTGTAAGGGAA CGAGCAGGAGGGGTACTGAGAGCTTGAGTGTATCTAGGAATCAAAGGATTTAGTAGAGAGTATGCCTTGGGCTTTTTGCA GCTCGTTTGCTCATGACCTATGGTTCCACATTTAAAACATACCCCCTGTAGTTTCTCATATCTGAGAAAGACCCAAGCTT TTGGTAGAATAGCACGTTTAAATTCACAGAAACATAATTTAGAAGCTAGGCCTCGAGTTTAATTTCTGAGGCCTAGAGTA GAATTGGGCTGGGAGGCCCAAGTGAACAACCAGAAGGCTGAAGTGGCTAAAGAATATTTTGACAAAAAAAGTGTTGGGTT GATGTTCTTAGAGGAAAAAATCAAATTGACCAAAAAAAAAAGAGGAAAAAATCAGGAATTGGATCAAGTAATAGCAGAGC ACTTGGCAGCAAAAAGGGAAAAGGGCCAAGACTTTGATAGCTACTAACATGTGTTTAACCTAACGTCAACCTACCAATTA ATCACACCATTAACAAATGCATGTCATGTACAAAACTAAATAATGAATAACTAAAATAGTAAAATACTATAAGGATCAAA TTGGCTTTGTTGATACTCAAATTTCTTAACATAACAGAGGAATATTAATTTTGTGCCAGCTAAACATGAACGCAGCTTCA GCCAATTTGGCTTTCTTGATAATCATCTTCACTCTCACAGTCACATCTAGTTTGTCTTTCTCCCTCCCCTTCCTAACACA CAACATTTCAGAATCACACATAAAAAAATATGAAGCTTAAAAGGTTTACATGTTTTTGTTTGCAGGTGTACAATTCAGAA GGATGGTAGTAGAAGCACAAGAACAAATTTACAAATGTAAAAGTGATGCAGATTGTGAAAGCCAATGTGATGGAGGAGGC TGCGAAAAACTCTGCCTTAGGTTGCCTAGTGTTTGCGTCAATGACCAATGTGCATGCCCTTTTGGATCAGGACACTCAGC TACCAAAACCTTGACAAATTCAACTTGTGCCCTTGATGAAGATTGCTCAAAGCTTTGTCCTTCAGATTGCAATATCAGAA GCTGCATCAAGGAAAAGTGTCAATGTGGATGTCATGGATAATCAATGAAGCATCCTCCTTTTCTGTTGTGGTTGTAGGGT TACCGACAAATGTGGGCTGATGCGAGTGCAATTGTGGTTGGGATGCTTGTGGGGAACCAAAATTCGTTACCTTGTGAGAG CAATCGTGTTAGTGGATCACAATTTCAAACCTTTTCTAAATAAAAAAGAGGTTGATGTTGAATGAGTTCATTTTTATGTT TTTAGTTCTTATCAATAGGCATTAAATTAGTGTTAAGTAGTATTAACGAACAGGGCACCATGAACTATGCTTGTTATTTA CAATATACTTTCAATTAAGTTACAGAAAAACCATTTTTATTTGTGAACTAATTGTTCTTGGGTCATAAACAACTCTAGTA TGACTATTATTGTTTCATTTTCTTTGTCATATAGGTATAACATTCTTAGGAGTATAGTTGTTTGGCAAAATTTTAGATGT AACATGTACAATCCAAACAAATCAAGTGCTGGTACTGATATTTAAAAAGAGCAGAGATCGTTCTGTTGCTTCAAAAGAGT TGACACGACCAAGTAAAAACTCTATCCCTTCAACCCATTTTTGTTTGTGGAGCTCGCTCTCGCACTTGAATTCTAGAAGA CCTTGTGCAGTTTTGATACCAAAATAGAGATCTCCTGAGGCTTCCCTTTCTTTTCTATATGGCCATGCAGTATCTTCATC ACAAACTCCATATACCACACCTGGTAACAACAAATGTTACATTGTATTAGAAAATACCCAATTGCAAGATATGTGCATAA TTGTTATTTGTGAGGAGTTTCTTTAATGCTAAAAAGCACTTACATTTATTCTTTTTGGAGAAAGCTCCTCCAACATGCTT ACTTTTGATCTTAAGTTTAACCTGAAAAAACAAGACATTTAATTTCTTATATCTGTGAATGAATAAGACATTTAACCACA TGAACATTGTTTGTTAGGTACTGATTAGTGTACCTGACTTTTCTTATTGATGTAAACAGTGACATGTTTCCATCTTAATG CACCTGAGAAAAAGTGCACTAACCTTTGATTAGAAATAATGATAACCAAATAGAATAATGTGTATTATTATTGGAAGAGA AAACTAAGTCCTCATAAATCACCTTTTTCTGTGAGTTGCAACAAGTCTCCAACGCATGGAGGATGACGTTCCAACTTCTC ACCATCAAAAGCAGGAAGCAAATGCGTTTCTGCTGCTATTGCTCTGTCATAGGGACTTATAGATGCAATCTTCTTTGCTT CTTTTGGCAATCGAGCTCTAAGAGCTGCTTCTCCTCGCAGAGCTGATATTGCATCAAGAAAATAATGTAGCAAGGAAAAA TCAATATTCATTCATTGTTTGGAAATCATTTCTACATTTAATTCTAAATTCCAGAGAAGCCTATATAGTTTGTTTTTACG TTGAGAAACCTCACATACTCAATTCTAATATAGAGTAAAATCAATTCTGGATGACAATGTAGATGGAAATCAAGCCTATA TAGTGACAGATTTGATTCTGATTAAATAGAAGTTAGTTAATACATTCATCCTATCAATACCTTATATAACAAAACTTACA AACATTTTCCCAAAGTAGATAGATTGAGAAACTACCTGTTGCAGCTGCAGCAGTGAGAGTCATTAGATCACCAGGGGTTT GAATATCAACCGCAGATTTGACAGTAGAAGCCAGACGGTCGTGATCAGCTCCGGCTAACTCCGCCATTTCAACACAATAT GATGCTAAGAGCTTTGTGGCTGAAGCCATTGCAAGATCCAATTTGGTGTGAGAGTCACTAGAAGGGTCCTTTACTACAGC GACAGAAGCCAGTGCAGAGGCTAAACCAGCAATGGAAATAGCAGAATGTACACGTGCATTTTCTAGACGTGCCTTTTCTT TCTTCTTAATTGTGATGTTTGTTGTATTGGTACGATGCTTGTGATGTAACCATTTTCCAATGGTACCTATTCTTCTACAA TTAGAAGAAGGTGTGATATTGCCTAGCTGCAAAAAGGTAGCATGAAACCACACAATGTATCAAAAGAATGTTTTTATTCA TCTTTGAATTTCAATTTCTTTAGTCTTTTTGTGATCCGGTCCATGCTTGTTTGGTTTCACAATACAATTTGCACAAAATT CACCTTTAATCAGAAACTAAGATAATGTTTGGAAAATAGAATCATTCCCAGTTGGTTAAAATCAATTCTAACCAGTTGAA ATGATAGTAAAATTGATTTCATTGGTCAAGAATTGGATCCTCTTAGCACATAGTTGCTTCTACGTAATTAATTCTAAAAT TTATAACTCAATTGCATAACGTTGCCCTACAAAACCACTTTTTTCCATAAAGGTACCGAAACATAAATCACACAACTTTA ACTCATATTTGCCGGATGTAATTTTAGTTGAATCAACTTCAAAATCAATTTTGCTTACG
CDS sequence (LotjaGi2g1v0421900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGATAGCTTTTGGTAGATTTGATGACTCTTTTAGCGTTACCTCCCTTAAGGCTTATCTAGCAGAATTCATTGC CACTTTACTTTTCATCTTTGCTGGCGTTGGATCAGCCATCGCTTACAATGAGCTTACATCGGACGCAGCATTGGATCCAA CGGGTCTGGTTGCAGTTGCTTTGGCCCATGCATTTGCACTATTTGTAGGCGTGTCCATTGCAGCCAACATCTCAGGCGGC CATTTGAACCCTGCTGTCACACTTGGATTGGCGGTTGGAGGAAACATCACCCTCCTCACCGGTTTCTTTTACTGGATTGC TCAATTGCTTGGCTCCATTGTCGCATGTCTCCTCCTCAATTTTATCACCTCCAAGAGCATTCCAACTCATGGACTAGCTT CTGGAGTGAACCCTGTTGGAGGTGTGGTGTTCGAGATTATTGCAACTTTTGGATTGGTTTACACTGTTTATGCCACTGCA GTTGATCCCAAAAAGGGTTCATTGGGTACCATTGCACCTATCGCTATTGGGTTCATAGTTGGTGCCAACATCTTAGCCGC TGGGCCGTTCAGTGGCGGGTCGATGAACCCAGCCCGATCATTTGGTCCAGCTGTGGTTAGTGGAAACTATGTTGATATCT GGATCTATTGGGTTGGCCCATTAATTGGAGGAGCCTTGGCTGGGTTGGTTTACGGTGGCGCTTTCATTTGTCCCCATCAC CCCATCCCGACCTAA
Protein sequence (LotjaGi2g1v0421900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKIAFGRFDDSFSVTSLKAYLAEFIATLLFIFAGVGSAIAYNELTSDAALDPTGLVAVALAHAFALFVGVSIAANISGG HLNPAVTLGLAVGGNITLLTGFFYWIAQLLGSIVACLLLNFITSKSIPTHGLASGVNPVGGVVFEIIATFGLVYTVYATA VDPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNYVDIWIYWVGPLIGGALAGLVYGGAFICPHH PIPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 20 | 20 | - | – | |
PANTHER | 1 | 240 | 240 | 6.3E-127 | – | |
PANTHER | 1 | 240 | 240 | 6.3E-127 | ||
Gene3D | 2 | 242 | 241 | 2.3E-88 | ||
SUPERFAMILY | 13 | 240 | 228 | 5.49E-67 | ||
Pfam | 14 | 231 | 218 | 2.8E-77 | ||
CDD | 19 | 231 | 213 | 2.95429E-63 | ||
PRINTS | 19 | 38 | 20 | 6.3E-55 | ||
TMHMM | 20 | 42 | 23 | - | – | |
Phobius | 21 | 42 | 22 | - | – | |
TIGRFAM | 23 | 231 | 209 | 1.0E-55 | ||
Phobius | 43 | 53 | 11 | - | – | |
Phobius | 54 | 75 | 22 | - | – | |
TMHMM | 55 | 77 | 23 | - | – | |
PRINTS | 63 | 87 | 25 | 6.3E-55 | ||
Phobius | 76 | 95 | 20 | - | – | |
ProSitePatterns | 81 | 89 | 9 | - | ||
Phobius | 96 | 122 | 27 | - | – | |
TMHMM | 97 | 119 | 23 | - | – | |
PRINTS | 100 | 119 | 20 | 6.3E-55 | ||
Phobius | 123 | 141 | 19 | - | – | |
TMHMM | 139 | 161 | 23 | - | – | |
Phobius | 142 | 160 | 19 | - | – | |
PRINTS | 144 | 162 | 19 | 6.3E-55 | ||
Phobius | 161 | 171 | 11 | - | – | |
TMHMM | 171 | 193 | 23 | - | – | |
Phobius | 172 | 193 | 22 | - | – | |
PRINTS | 177 | 199 | 23 | 6.3E-55 | ||
Phobius | 194 | 212 | 19 | - | – | |
Phobius | 213 | 237 | 25 | - | – | |
TMHMM | 214 | 236 | 23 | - | – | |
PRINTS | 214 | 234 | 21 | 6.3E-55 | ||
Phobius | 238 | 244 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0421900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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