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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR034294
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We have found 54 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 7.907s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0049700.1
n.a. Aquaporin; TAIR: AT4G18910.1 NOD26-like intrinsic protein 1;2; Swiss-Prot: sp|Q8LFP7|NIP12_ARATH Aquaporin NIP1-2; TrEMBL-Plants: tr|I3SMG3|I3SMG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0049700 LjG1.1_chr1 6900952 6902764 +
2 domain predictions
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LotjaGi1g1v0050800.1
n.a. Aquaporin; TAIR: AT4G18910.1 NOD26-like intrinsic protein 1;2; Swiss-Prot: sp|Q8LFP7|NIP12_ARATH Aquaporin NIP1-2; TrEMBL-Plants: tr|I3SMG3|I3SMG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0050800 LjG1.1_chr1 7239886 7241841 -
2 domain predictions
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LotjaGi1g1v0050800.2
n.a. Aquaporin; TAIR: AT4G18910.1 NOD26-like intrinsic protein 1;2; Swiss-Prot: sp|Q8LFP7|NIP12_ARATH Aquaporin NIP1-2; TrEMBL-Plants: tr|I1MEW7|I1MEW7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0050800 LjG1.1_chr1 7239955 7241651 -
2 domain predictions
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LotjaGi1g1v0080000.1
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|P25794|PIP2_PEA Probable aquaporin PIP-type 7a; TrEMBL-Plants: tr|Q946J9|Q946J9_MEDTR Aquaporin protein PIP1;1; Found in the gene: LotjaGi1g1v0080000 LjG1.1_chr1 11545327 11548376 +
2 domain predictions
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LotjaGi1g1v0080000.2
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|P25794|PIP2_PEA Probable aquaporin PIP-type 7a; TrEMBL-Plants: tr|Q946J9|Q946J9_MEDTR Aquaporin protein PIP1;1; Found in the gene: LotjaGi1g1v0080000 LjG1.1_chr1 11545670 11546977 +
2 domain predictions
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LotjaGi1g1v0080000.3
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|P25794|PIP2_PEA Probable aquaporin PIP-type 7a; TrEMBL-Plants: tr|Q946J9|Q946J9_MEDTR Aquaporin protein PIP1;1; Found in the gene: LotjaGi1g1v0080000 LjG1.1_chr1 11545670 11547097 +
2 domain predictions
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LotjaGi1g1v0145800.1
n.a. Aquaporin; TAIR: AT1G31885.1 NOD26-like intrinsic protein 3;1; Swiss-Prot: sp|P08995|NO26_SOYBN Nodulin-26; TrEMBL-Plants: tr|K7M7N1|K7M7N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0145800 LjG1.1_chr1 24690803 24700024 +
2 domain predictions
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LotjaGi1g1v0503000.1
n.a. Aquaporin-1; TAIR: AT5G37820.2 NOD26-like intrinsic protein 4;2; Swiss-Prot: sp|Q19KC1|NIP21_MAIZE Aquaporin NIP2-1; TrEMBL-Plants: tr|A0A1J7GXT1|A0A1J7GXT1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0503000 LjG1.1_chr1 102069155 102073181 -
2 domain predictions
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LotjaGi1g1v0534100.1
n.a. Aquaporin; TAIR: AT4G01470.1 tonoplast intrinsic protein 1;3; Swiss-Prot: sp|O82598|TIP13_ARATH Aquaporin TIP1-3; TrEMBL-Plants: tr|I1JDR9|I1JDR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534100 LjG1.1_chr1 106243669 106247708 +
2 domain predictions
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LotjaGi1g1v0534100.2
n.a. Aquaporin; TAIR: AT4G01470.1 tonoplast intrinsic protein 1;3; Swiss-Prot: sp|O82598|TIP13_ARATH Aquaporin TIP1-3; TrEMBL-Plants: tr|I1JDR9|I1JDR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534100 LjG1.1_chr1 106245691 106247424 +
2 domain predictions
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LotjaGi1g1v0534100.3
n.a. Aquaporin; TAIR: AT4G01470.1 tonoplast intrinsic protein 1;3; Swiss-Prot: sp|O82598|TIP13_ARATH Aquaporin TIP1-3; TrEMBL-Plants: tr|I1JDR9|I1JDR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534100 LjG1.1_chr1 106245691 106247497 +
2 domain predictions
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LotjaGi1g1v0558200.2
n.a. Aquaporin; TAIR: AT4G35100.1 plasma membrane intrinsic protein 3; Swiss-Prot: sp|P93004|PIP27_ARATH Aquaporin PIP2-7; TrEMBL-Plants: tr|A0A0L9UIG5|A0A0L9UIG5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0558200 LjG1.1_chr1 109046852 109047811 -
2 domain predictions
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LotjaGi1g1v0685800.1
n.a. Aquaporin; TAIR: AT2G36830.1 gamma tonoplast intrinsic protein; Swiss-Prot: sp|Q9FY14|TIP1_MEDTR Probable aquaporin TIP-type; TrEMBL-Plants: tr|Q9LKJ6|Q9LKJ6_LOTJA Water-selective transport intrinsic membrane protein 1; Found in the gene: LotjaGi1g1v0685800 LjG1.1_chr1 125272155 125274840 +
2 domain predictions
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LotjaGi1g1v0691400.1
n.a. Aquaporin-like protein; TAIR: AT2G37170.2 plasma membrane intrinsic protein 2; Swiss-Prot: sp|Q6K215|PIP22_ORYSJ Probable aquaporin PIP2-2; TrEMBL-Plants: tr|Q2HV44|Q2HV44_MEDTR Major intrinsic protein; Found in the gene: LotjaGi1g1v0691400 LjG1.1_chr1 125966519 125968361 +
2 domain predictions
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LotjaGi2g1v0170100.1
n.a. Aquaporin-like protein; TAIR: AT1G73190.1 Aquaporin-like superfamily protein; Swiss-Prot: sp|P23958|TIPA_PHAVU Probable aquaporin TIP-type alpha; TrEMBL-Plants: tr|A0A0R0I960|A0A0R0I960_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0170100 LjG1.1_chr2 58545955 58549119 -
2 domain predictions
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LotjaGi2g1v0359700.1
n.a. Aquaporin; TAIR: AT4G35100.1 plasma membrane intrinsic protein 3; Swiss-Prot: sp|Q9ATM4|PIP27_MAIZE Aquaporin PIP2-7; TrEMBL-Plants: tr|V7AJI3|V7AJI3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0359700 LjG1.1_chr2 85704246 85708258 +
2 domain predictions
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LotjaGi2g1v0369000.1
n.a. Aquaporin; TAIR: AT4G01470.1 tonoplast intrinsic protein 1;3; Swiss-Prot: sp|O82598|TIP13_ARATH Aquaporin TIP1-3; TrEMBL-Plants: tr|I3S2G4|I3S2G4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0369000 LjG1.1_chr2 86644321 86648135 +
2 domain predictions
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LotjaGi2g1v0369000.2
n.a. Aquaporin; TAIR: AT4G01470.1 tonoplast intrinsic protein 1;3; Swiss-Prot: sp|O82598|TIP13_ARATH Aquaporin TIP1-3; TrEMBL-Plants: tr|I3S2G4|I3S2G4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0369000 LjG1.1_chr2 86644508 86645766 +
2 domain predictions
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LotjaGi2g1v0369000.3
n.a. Aquaporin; TAIR: AT4G01470.1 tonoplast intrinsic protein 1;3; Swiss-Prot: sp|O82598|TIP13_ARATH Aquaporin TIP1-3; TrEMBL-Plants: tr|I3S2G4|I3S2G4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0369000 LjG1.1_chr2 86644508 86645766 +
2 domain predictions
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LotjaGi2g1v0421900.1
n.a. Aquaporin; TAIR: AT5G47450.1 tonoplast intrinsic protein 2;3; Swiss-Prot: sp|Q9FGL2|TIP23_ARATH Aquaporin TIP2-3; TrEMBL-Plants: tr|I3S680|I3S680_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0421900 LjG1.1_chr2 91979935 91994047 -
2 domain predictions
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LotjaGi2g1v0421900.2
n.a. Aquaporin; TAIR: AT5G47450.1 tonoplast intrinsic protein 2;3; Swiss-Prot: sp|Q9FGL2|TIP23_ARATH Aquaporin TIP2-3; TrEMBL-Plants: tr|I3S680|I3S680_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0421900 LjG1.1_chr2 91981756 91994054 -
2 domain predictions
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LotjaGi2g1v0421900.3
n.a. Aquaporin; TAIR: AT5G47450.1 tonoplast intrinsic protein 2;3; Swiss-Prot: sp|Q9FGL2|TIP23_ARATH Aquaporin TIP2-3; TrEMBL-Plants: tr|I3S680|I3S680_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0421900 LjG1.1_chr2 91992773 91993986 -
2 domain predictions
 –
LotjaGi2g1v0422000.1
n.a. Aquaporin; TAIR: AT5G47450.1 tonoplast intrinsic protein 2;3; Swiss-Prot: sp|Q9FGL2|TIP23_ARATH Aquaporin TIP2-3; TrEMBL-Plants: tr|I3S680|I3S680_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0422000 LjG1.1_chr2 92004928 92007345 -
2 domain predictions
 –
LotjaGi2g1v0434500.1
n.a. Aquaporin-like protein; TAIR: AT2G45960.1 plasma membrane intrinsic protein 1B; Swiss-Prot: sp|Q7XSQ9|PIP12_ORYSJ Probable aquaporin PIP1-2; TrEMBL-Plants: tr|I3SYY3|I3SYY3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0434500 LjG1.1_chr2 93088372 93090577 +
2 domain predictions
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LotjaGi2g1v0434500.2
n.a. Aquaporin-like protein; TAIR: AT2G45960.2 plasma membrane intrinsic protein 1B; Swiss-Prot: sp|Q7XSQ9|PIP12_ORYSJ Probable aquaporin PIP1-2; TrEMBL-Plants: tr|I3SYY3|I3SYY3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0434500 LjG1.1_chr2 93088604 93090063 +
2 domain predictions
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LotjaGi2g1v0434500.3
n.a. Aquaporin-like protein; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|Q7XSQ9|PIP12_ORYSJ Probable aquaporin PIP1-2; TrEMBL-Plants: tr|I3SYY3|I3SYY3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0434500 LjG1.1_chr2 93088606 93090174 +
2 domain predictions
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LotjaGi3g1v0004700.1
n.a. Aquaporin-1; TAIR: AT1G80760.1 NOD26-like intrinsic protein 6;1; Swiss-Prot: sp|Q9SAI4|NIP61_ARATH Aquaporin NIP6-1; TrEMBL-Plants: tr|A9YTW7|A9YTW7_LOTJA Major intrinsic protein NIP6;1; Found in the gene: LotjaGi3g1v0004700 LjG1.1_chr3 611053 616768 +
2 domain predictions
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LotjaGi3g1v0019700.1
n.a. Aquaporin-like protein; TAIR: AT3G16240.1 delta tonoplast integral protein; Swiss-Prot: sp|Q41951|TIP21_ARATH Aquaporin TIP2-1; TrEMBL-Plants: tr|I3S7T3|I3S7T3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0019700 LjG1.1_chr3 2041988 2044733 -
2 domain predictions
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LotjaGi3g1v0019700.2
n.a. Aquaporin-like protein; TAIR: AT3G16240.1 delta tonoplast integral protein; Swiss-Prot: sp|Q41951|TIP21_ARATH Aquaporin TIP2-1; TrEMBL-Plants: tr|I3S7T3|I3S7T3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0019700 LjG1.1_chr3 2042658 2044508 -
2 domain predictions
 –
LotjaGi3g1v0162900.1
n.a. Aquaporin; TAIR: AT2G37170.2 plasma membrane intrinsic protein 2; Swiss-Prot: sp|Q9ATM4|PIP27_MAIZE Aquaporin PIP2-7; TrEMBL-Plants: tr|A0A151RD92|A0A151RD92_CAJCA Aquaporin PIP2-7; Found in the gene: LotjaGi3g1v0162900 LjG1.1_chr3 22126899 22130198 -
2 domain predictions
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LotjaGi3g1v0210700.1
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|Q6EU94|PIP11_ORYSJ Aquaporin PIP1-1; TrEMBL-Plants: tr|A0A1J7FMW8|A0A1J7FMW8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0210700 LjG1.1_chr3 31483981 31486246 +
2 domain predictions
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LotjaGi3g1v0210700.2
n.a. Aquaporin; TAIR: AT2G45960.2 plasma membrane intrinsic protein 1B; Swiss-Prot: sp|Q6EU94|PIP11_ORYSJ Aquaporin PIP1-1; TrEMBL-Plants: tr|A0A1J7FMW8|A0A1J7FMW8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0210700 LjG1.1_chr3 31484109 31485484 +
2 domain predictions
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LotjaGi3g1v0210700.3
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|Q39196|PIP14_ARATH Probable aquaporin PIP1-4; TrEMBL-Plants: tr|A0A1J7FMW8|A0A1J7FMW8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0210700 LjG1.1_chr3 31484109 31485840 +
2 domain predictions
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LotjaGi3g1v0368200.1
n.a. Aquaporin-like protein; TAIR: AT3G16240.1 delta tonoplast integral protein; Swiss-Prot: sp|Q41951|TIP21_ARATH Aquaporin TIP2-1; TrEMBL-Plants: tr|I3T438|I3T438_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0368200 LjG1.1_chr3 75457718 75459512 -
2 domain predictions
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LotjaGi3g1v0545300.1
n.a. Aquaporin; TAIR: AT3G47440.1 tonoplast intrinsic protein 5;1; Swiss-Prot: sp|Q9STX9|TIP51_ARATH Probable aquaporin TIP5-1; TrEMBL-Plants: tr|A0A151TM76|A0A151TM76_CAJCA Putative aquaporin TIP5-1; Found in the gene: LotjaGi3g1v0545300 LjG1.1_chr3 96153625 96155079 +
2 domain predictions
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LotjaGi3g1v0545300.2
n.a. Aquaporin-like protein; TAIR: AT3G47440.1 tonoplast intrinsic protein 5;1; Swiss-Prot: sp|Q9STX9|TIP51_ARATH Probable aquaporin TIP5-1; TrEMBL-Plants: tr|A0A151TM76|A0A151TM76_CAJCA Putative aquaporin TIP5-1; Found in the gene: LotjaGi3g1v0545300 LjG1.1_chr3 96154121 96155090 +
2 domain predictions
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LotjaGi3g1v0545300.3
n.a. Tonoplast intrinsic protein, putative; TAIR: AT3G47440.1 tonoplast intrinsic protein 5;1; Swiss-Prot: sp|Q9STX9|TIP51_ARATH Probable aquaporin TIP5-1; TrEMBL-Plants: tr|G7IGS0|G7IGS0_MEDTR Major intrinsic protein (MIP) family transporter; Found in the gene: LotjaGi3g1v0545300 LjG1.1_chr3 96154699 96155165 +
2 domain predictions
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LotjaGi4g1v0078600.1
n.a. Aquaporin; TAIR: AT5G37810.1 NOD26-like intrinsic protein 4;1; Swiss-Prot: sp|P49173|NIP1_NICAL Probable aquaporin NIP-type; TrEMBL-Plants: tr|A0A072UPF3|A0A072UPF3_MEDTR Major intrinsic protein (MIP) family transporter; Found in the gene: LotjaGi4g1v0078600 LjG1.1_chr4 10268550 10271355 +
2 domain predictions
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LotjaGi4g1v0381100_LC.1
n.a. Aquaporin; TAIR: AT4G18910.1 NOD26-like intrinsic protein 1;2; Swiss-Prot: sp|P08995|NO26_SOYBN Nodulin-26; TrEMBL-Plants: tr|K4QB87|K4QB87_LOTJA NIP aquaporin; Found in the gene: LotjaGi4g1v0381100_LC LjG1.1_chr4 76010649 76012170 +
2 domain predictions
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LotjaGi4g1v0427400.1
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|Q7XSQ9|PIP12_ORYSJ Probable aquaporin PIP1-2; TrEMBL-Plants: tr|A0A072TUG6|A0A072TUG6_MEDTR Major intrinsic protein (MIP) family transporter; Found in the gene: LotjaGi4g1v0427400 LjG1.1_chr4 80196581 80198582 +
2 domain predictions
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LotjaGi4g1v0427400.2
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|Q7XSQ9|PIP12_ORYSJ Probable aquaporin PIP1-2; TrEMBL-Plants: tr|A0A072TUG6|A0A072TUG6_MEDTR Major intrinsic protein (MIP) family transporter; Found in the gene: LotjaGi4g1v0427400 LjG1.1_chr4 80196977 80198250 +
2 domain predictions
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LotjaGi5g1v0176700_LC.1
n.a. Aquaporin-like protein; TAIR: AT3G06100.1 NOD26-like intrinsic protein 7;1; Swiss-Prot: sp|Q8LAI1|NIP71_ARATH Probable aquaporin NIP7-1; TrEMBL-Plants: tr|A0A072VME2|A0A072VME2_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi5g1v0176700_LC LjG1.1_chr5 45030562 45032780 -
2 domain predictions
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LotjaGi5g1v0198400.1
n.a. Aquaporin-like protein; TAIR: AT1G73190.1 Aquaporin-like superfamily protein; Swiss-Prot: sp|P23958|TIPA_PHAVU Probable aquaporin TIP-type alpha; TrEMBL-Plants: tr|A0A072VLM9|A0A072VLM9_MEDTR Major intrinsic protein (MIP) family transporter; Found in the gene: LotjaGi5g1v0198400 LjG1.1_chr5 49597111 49599147 -
2 domain predictions
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LotjaGi5g1v0274800.1
n.a. Aquaporin; TAIR: AT2G37170.2 plasma membrane intrinsic protein 2; Swiss-Prot: sp|P43287|PIP22_ARATH Aquaporin PIP2-2; TrEMBL-Plants: tr|I3T4F8|I3T4F8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0274800 LjG1.1_chr5 58853159 58856552 +
2 domain predictions
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LotjaGi5g1v0286900.1
n.a. Aquaporin-1; TAIR: AT4G10380.1 NOD26-like intrinsic protein 5;1; Swiss-Prot: sp|Q9SV84|NIP51_ARATH Probable aquaporin NIP5-1; TrEMBL-Plants: tr|A9YTW6|A9YTW6_LOTJA Major intrinsic protein NIP5;1; Found in the gene: LotjaGi5g1v0286900 LjG1.1_chr5 60354236 60362784 +
2 domain predictions
 –
LotjaGi5g1v0286900.2
n.a. Aquaporin-1; TAIR: AT4G10380.1 NOD26-like intrinsic protein 5;1; Swiss-Prot: sp|Q9SV84|NIP51_ARATH Probable aquaporin NIP5-1; TrEMBL-Plants: tr|A9YTW6|A9YTW6_LOTJA Major intrinsic protein NIP5;1; Found in the gene: LotjaGi5g1v0286900 LjG1.1_chr5 60359654 60361647 +
2 domain predictions
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LotjaGi5g1v0357000.1
n.a. Aquaporin; TAIR: AT4G01470.1 tonoplast intrinsic protein 1;3; Swiss-Prot: sp|O82598|TIP13_ARATH Aquaporin TIP1-3; TrEMBL-Plants: tr|A0A151U848|A0A151U848_CAJCA Aquaporin TIP1-3; Found in the gene: LotjaGi5g1v0357000 LjG1.1_chr5 67162725 67164838 -
2 domain predictions
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LotjaGi6g1v0071300.1
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|P25794|PIP2_PEA Probable aquaporin PIP-type 7a; TrEMBL-Plants: tr|C6TEZ8|C6TEZ8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0071300 LjG1.1_chr6 13549735 13551785 -
2 domain predictions
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LotjaGi6g1v0071300.2
n.a. Aquaporin; TAIR: AT4G00430.1 plasma membrane intrinsic protein 1;4; Swiss-Prot: sp|P25794|PIP2_PEA Probable aquaporin PIP-type 7a; TrEMBL-Plants: tr|C6TEZ8|C6TEZ8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0071300 LjG1.1_chr6 13550069 13551539 -
2 domain predictions
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LotjaGi6g1v0317000.1
n.a. Aquaporin; TAIR: AT4G18910.1 NOD26-like intrinsic protein 1;2; Swiss-Prot: sp|Q8LFP7|NIP12_ARATH Aquaporin NIP1-2; TrEMBL-Plants: tr|I3SMG3|I3SMG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0317000 LjG1.1_chr6 63461204 63464848 -
2 domain predictions
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