Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0425300 |
| Transcript ID | LotjaGi2g1v0425300.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenine phosphoribosyltransferase-like protein; TAIR: AT4G22570.1 adenine phosphoribosyl transferase 3; Swiss-Prot: sp|Q9SUW2|APT3_ARATH Adenine phosphoribosyltransferase 3; TrEMBL-Plants: tr|K7KN25|K7KN25_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0425300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92305352..92309228) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCGGCTTGCACAGACGAAGACCCTCGTCTCCATGGCATCCGAACTAAGATTCGCGTCGTCCCCAATTTCCCCAAATC GGGTTCGTTCTCCTTCTTCCTCTTCCTCTGTTTTTGTTATTTCCAATTTCTAAGCTCTGTTTTCATGGATTCAAAGGGTT TTTCCCTTAGCTAATGGCTTGGTTTCAATGACAGGTATCATGTTCCAAGACATCACTACTCTTTTGCTCGACCCCAAAGC TTTTAAGGACACCATCGATTTGTTCGTTGAGCGATACAAGGGCAAAAACATTTCTGTTGTTGCAGGTAAAATTATCTTGT CTTTTTTAACAAAAAATTGTATGAACAAGTTGATTTCAAGGTATTTCTGTGTTTTTTCTATGTGGGGGAGGAAGAGGGTG TTGTCACTATGGTTAACTACAAGGTGGTGGGGTCCATGGCTAGGAGAAAGTTGGCCGGACTATGCAGTAATGCTGTACAT TGCATATGTTTCTGGTTGTCTTTTTGAATGCTCTTAAGGGACATCATGGAATGGAAATGGAAGACACTGTGTAGGTTTTG AGGGAGTCATTTTTTGTTTGACTATGAGGTCTGGTAAGGCTAGTGGGTTTTGCCATTGATTGCTTTCAAGTTTTTCCTCA GCTTGCTTTCCCCTTCTCTCTTTGTGGCCATGTGCCTGGATCCAATTTGCATGGAGCACCATTGGTGAACGATTTCAACT TGTACAAAAGTGGACCCTCCTCACGCATGTTTTCAACTCGGTGGATTTTGCCCCCACTCCATTATATTATAATTTGTGGG TTCCTCCACTTCACTGTTGAGTGACTTGGAGTTCGTTCTAGTACCTCATTTTTTACTTTTTTGGTCACTCCTTTGTCTGT TTCTGGTTTCTGAATTTCTAATTCCTTGGTGAAACTTGAGTGTCTCTTGTTGTTGCAAATGATGACGAACTTCCAGTAGT TCAGTACTATGCTACTTTGCTTTTTGCTTGGTTTTTCCGATTTGTTTTCTCCTATGTGTACACTGTGTCGTCTTGTACTA GTATTTTTCTACTTTTGACCTTTTTCCCAACATTGGCGGATTTTGCTGGAAACCTTGTGGATTGTTGCTATATGTTGAGC AGGATATGACACGGAGGTTATTGAAACTGGAGCTATTATGTCCTGAGTTCATGTCTAATTTTATAGTATGTTTGGATCAG CTTATCTTTTAATCAATTTTGAACTCAAAAGCTACTTGCAGAAGCTTCTTCCCAGTATTGATTATGTCCTTAGAGCCAAT TTGTAGAAGGATTTCGCACTTTAGTAGCTTAGATGTTGATGTTACGCATGCAGTGTTTTTGTGTTCCTGTCCATTGATAA AATATTAGATGCCACATTTTCTGTATTGTTTGTTGGGCCTTTGTTCCTATTTTAGTTTTCTATGTGTGATTAGAGAATGA ACTATAATACAATCCGGTTGGCTGAGACTTGTCTTTTGGCGTTTGCATTAGGATTTGTCTGTATGTGCTAATTTGGTTTT TTTTACCAGTTACATATGTCTTTTGTGACACATTCCGAGAAGCTTGTCTTCAATAATAGACAACAGTATAAGATGTAGAA TTTGTTTGCGTTTAATAATAGTGTTATATTACCAATTAGAACTGCTGATTGCCTACTGAGTGATGGGTCGTTTGGCATCA TCACATTTTAAATGCATTGGTGTTTTCTTGGACTTTTGGGTGTTTGTATCTCTATGAACATAGGATCTTTATGATGATGA GTCACTCCTCCTTTCTTCTTTTTTAATTTTTTGGGCGGGGAAGGTTGTATTTTTTTTAAGTCAGTTTGATTGAGCTTGCA TTCTTTTCACCAGATCTGGCATTAGTTCTTCCATCATTGGCAACCTATGCCAACATGGTCTGGTCTCTTGGCCATTGCTA ATTTTCAGTCTTTGTCTGCCACTTGTGTTCTAATTTTGCATTCAATTTAGATCCTTAATTGTATTGTAGGGTTCACATTA GAGTTCTTGGTCAGTTTCTATTTACATGGTGGTTTCAGTAACCATGAATCATTTGTGCTATTCATATTATTTGATGACAT TAATATTTAAAACTCCCATAATAGGACTTGGAAGCAATTACAAACAGAAATGGTAGATTTTTATATTTTATTTGACTCTT TTGTTATAGGTTTTTAGCTACTTGTAGCACACTATCACTGCTAACAGTTCCTTGATGGTGGACTACATTTCATTTGCAAT AGCACATGCTTTATTTTCCATAATCTCATGTTCTGATAAATGATTTTTCTTCCGTAGGAATTGAAGCTCGGGGTTTTATT TTTGGTCCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCATTGAGAAAACCAAAGAAGTTGCCTGGTAAATTTTG ATCCCTTGATTTTAATAGTTTTCCTTTACTTTCATTTATATGCTGATTGTATCACTGTTTTAGTGTTATTAATCACATGT TTTTGCAGGATGTTGCCTGTTTCTTTTATGCAATTCTTGTTTTAGTACTTAAATGTTAAATTGCATTCCTGTTGCTCATT GTTTATTAACATTCCTCAATTGATTCTTCATTCTTACTCTGTTTCACCCACCCACATAGCCTATAAATATGTGAAGTAAA TATATGAGAGTGGTTTTCCTTGTCCTTGTTTTTGTGTTTCAACCTTGCAAAGCTTGTGGTGGTATGGGTCTTGAGTTATC CAGTTTCTGAAATATAAATATGATTAATAGCTTAATACCTCCTGGTATACGGAGAATTCATTGTGATATGTTCCCATGAC AAATAAATTATAAGTTATGTATTTACAGTCAATGAATACAACTACTCGCTTGACCTGTAGTTAGACCATTTAGCCTCTTA TGTATCCTTTTTCATTCTGTTTCCTTTTCTTTGTTATATTGAGCAGCTTTCCATGCACTGGTAATCTGAACTCCGGGTTC ATGTGCTAATTACAGGGTGTATTGTTGGTTTTCTTCTCATACTATTATATATTTTTATCCATTGCAATCATCAACTAAAT GAGAATAAATTATAAAAACTGCTTCAATAAATAAACCTTGAAATATTAATTGTTCGTTGCTCTGGCTTTGTCAAGGTTTC AACTTTGAGTCAACTAATTTGTACTTCTATTCCAGGGAAAGTTATTTCTCAAGAATACATTTTGGAATATGGAAGGGACT GTCTTGAGATGCATGTTGGAGCTGTTGAATCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACG CTCTGTGCAGCTATGGACTTGCTAGGTAAAGTGTCTGTAACTGTAAGCAAAGTCTATGTTAAATGAACTGTTATTAAATC AGAATATGACATTCATGTACCTAATGTAGATTCATCAACTTTATCTCTATAGAAGTAGCTTAATTGGTCTACTTCATATG TTTAGTTTCAGTTCTTGCCTGCAGGGATTTGTATCCCCAACTTCGCCTTATTTATCATTTTGACGTGAAAAGGAATAATT GATGAGTATTATATGCATTCATACTAGGAAATTAGGAATAACCCCTTGTGTATAAATGAATAGCATTAATGTTCTTATTA CACGTCACCAGTATAAGCTGTCTGTACAGATTAAGTTGAATGTTCTTTGCTGTATTTATGCCAATTTTTTGCTGCACTTT TGCTAACAGACCTGACTTTTGGCACCTTTATTTGCCCCGCTATGTCAAACTTTGGATCTGATTATGTTGATGTTTTTGTG GTCTGTTCAGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCATGTGTAATTGAACTACCAGAATTGAAGGTATGTGTTGA TTGGATTTTCTCAACATTTTTATTTTCGTGTGTTTGA
CDS sequence (LotjaGi2g1v0425300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGGCTTGCACAGACGAAGACCCTCGTCTCCATGGCATCCGAACTAAGATTCGCGTCGTCCCCAATTTCCCCAAATC GGGAATTGAAGCTCGGGGTTTTATTTTTGGTCCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCATTGAGAAAAC CAAAGAAGTTGCCTGGGAAAGTTATTTCTCAAGAATACATTTTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGA GCTGTTGAATCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACGCTCTGTGCAGCTATGGACTT GCTAGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCATGTGTAATTGAACTACCAGAATTGAAGGTATGTGTTGATTGGA TTTTCTCAACATTTTTATTTTCGTGTGTTTGA
Protein sequence (LotjaGi2g1v0425300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSACTDEDPRLHGIRTKIRVVPNFPKSGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVG AVESGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKVCVDWIFSTFLFSCV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 29 | 29 | 4.0E-74 | – | |
| PANTHER | 1 | 29 | 29 | 4.0E-74 | – | |
| Gene3D | 1 | 131 | 131 | 6.9E-44 | ||
| PANTHER | 27 | 129 | 103 | 4.0E-74 | – | |
| PANTHER | 27 | 129 | 103 | 4.0E-74 | – | |
| CDD | 28 | 138 | 111 | 2.80516E-25 | ||
| Pfam | 28 | 126 | 99 | 2.0E-17 | ||
| SUPERFAMILY | 28 | 127 | 100 | 9.05E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). |
Expression pattern of LotjaGi2g1v0425300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…