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LotjaGi2g1v0425300.6

Overview

Field Value
Gene ID LotjaGi2g1v0425300
Transcript ID LotjaGi2g1v0425300.6
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Adenine phosphoribosyltransferase-like protein; TAIR: AT4G22570.1 adenine phosphoribosyl transferase 3; Swiss-Prot: sp|Q9SUW2|APT3_ARATH Adenine phosphoribosyltransferase 3; TrEMBL-Plants: tr|A0A0S3T6I9|A0A0S3T6I9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0425300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:92305809..92309228) extracted from Lotus japonicus Gifu genome v1.2.

ATGTCGGCTTGCACAGACGAAGACCCTCGTCTCCATGGCATCCGAACTAAGATTCGCGTCGTCCCCAATTTCCCCAAATC GGGTTCGTTCTCCTTCTTCCTCTTCCTCTGTTTTTGTTATTTCCAATTTCTAAGCTCTGTTTTCATGGATTCAAAGGGTT TTTCCCTTAGCTAATGGCTTGGTTTCAATGACAGGTATCATGTTCCAAGACATCACTACTCTTTTGCTCGACCCCAAAGC TTTTAAGGACACCATCGATTTGTTCGTTGAGCGATACAAGGGCAAAAACATTTCTGTTGTTGCAGGTAAAATTATCTTGT CTTTTTTAACAAAAAATTGTATGAACAAGTTGATTTCAAGGTATTTCTGTGTTTTTTCTATGTGGGGGAGGAAGAGGGTG TTGTCACTATGGTTAACTACAAGGTGGTGGGGTCCATGGCTAGGAGAAAGTTGGCCGGACTATGCAGTAATGCTGTACAT TGCATATGTTTCTGGTTGTCTTTTTGAATGCTCTTAAGGGACATCATGGAATGGAAATGGAAGACACTGTGTAGGTTTTG AGGGAGTCATTTTTTGTTTGACTATGAGGTCTGGTAAGGCTAGTGGGTTTTGCCATTGATTGCTTTCAAGTTTTTCCTCA GCTTGCTTTCCCCTTCTCTCTTTGTGGCCATGTGCCTGGATCCAATTTGCATGGAGCACCATTGGTGAACGATTTCAACT TGTACAAAAGTGGACCCTCCTCACGCATGTTTTCAACTCGGTGGATTTTGCCCCCACTCCATTATATTATAATTTGTGGG TTCCTCCACTTCACTGTTGAGTGACTTGGAGTTCGTTCTAGTACCTCATTTTTTACTTTTTTGGTCACTCCTTTGTCTGT TTCTGGTTTCTGAATTTCTAATTCCTTGGTGAAACTTGAGTGTCTCTTGTTGTTGCAAATGATGACGAACTTCCAGTAGT TCAGTACTATGCTACTTTGCTTTTTGCTTGGTTTTTCCGATTTGTTTTCTCCTATGTGTACACTGTGTCGTCTTGTACTA GTATTTTTCTACTTTTGACCTTTTTCCCAACATTGGCGGATTTTGCTGGAAACCTTGTGGATTGTTGCTATATGTTGAGC AGGATATGACACGGAGGTTATTGAAACTGGAGCTATTATGTCCTGAGTTCATGTCTAATTTTATAGTATGTTTGGATCAG CTTATCTTTTAATCAATTTTGAACTCAAAAGCTACTTGCAGAAGCTTCTTCCCAGTATTGATTATGTCCTTAGAGCCAAT TTGTAGAAGGATTTCGCACTTTAGTAGCTTAGATGTTGATGTTACGCATGCAGTGTTTTTGTGTTCCTGTCCATTGATAA AATATTAGATGCCACATTTTCTGTATTGTTTGTTGGGCCTTTGTTCCTATTTTAGTTTTCTATGTGTGATTAGAGAATGA ACTATAATACAATCCGGTTGGCTGAGACTTGTCTTTTGGCGTTTGCATTAGGATTTGTCTGTATGTGCTAATTTGGTTTT TTTTACCAGTTACATATGTCTTTTGTGACACATTCCGAGAAGCTTGTCTTCAATAATAGACAACAGTATAAGATGTAGAA TTTGTTTGCGTTTAATAATAGTGTTATATTACCAATTAGAACTGCTGATTGCCTACTGAGTGATGGGTCGTTTGGCATCA TCACATTTTAAATGCATTGGTGTTTTCTTGGACTTTTGGGTGTTTGTATCTCTATGAACATAGGATCTTTATGATGATGA GTCACTCCTCCTTTCTTCTTTTTTAATTTTTTGGGCGGGGAAGGTTGTATTTTTTTTAAGTCAGTTTGATTGAGCTTGCA TTCTTTTCACCAGATCTGGCATTAGTTCTTCCATCATTGGCAACCTATGCCAACATGGTCTGGTCTCTTGGCCATTGCTA ATTTTCAGTCTTTGTCTGCCACTTGTGTTCTAATTTTGCATTCAATTTAGATCCTTAATTGTATTGTAGGGTTCACATTA GAGTTCTTGGTCAGTTTCTATTTACATGGTGGTTTCAGTAACCATGAATCATTTGTGCTATTCATATTATTTGATGACAT TAATATTTAAAACTCCCATAATAGGACTTGGAAGCAATTACAAACAGAAATGGTAGATTTTTATATTTTATTTGACTCTT TTGTTATAGGTTTTTAGCTACTTGTAGCACACTATCACTGCTAACAGTTCCTTGATGGTGGACTACATTTCATTTGCAAT AGCACATGCTTTATTTTCCATAATCTCATGTTCTGATAAATGATTTTTCTTCCGTAGGAATTGAAGCTCGGGGTTTTATT TTTGGTCCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCATTGAGAAAACCAAAGAAGTTGCCTGGTAAATTTTG ATCCCTTGATTTTAATAGTTTTCCTTTACTTTCATTTATATGCTGATTGTATCACTGTTTTAGTGTTATTAATCACATGT TTTTGCAGGATGTTGCCTGTTTCTTTTATGCAATTCTTGTTTTAGTACTTAAATGTTAAATTGCATTCCTGTTGCTCATT GTTTATTAACATTCCTCAATTGATTCTTCATTCTTACTCTGTTTCACCCACCCACATAGCCTATAAATATGTGAAGTAAA TATATGAGAGTGGTTTTCCTTGTCCTTGTTTTTGTGTTTCAACCTTGCAAAGCTTGTGGTGGTATGGGTCTTGAGTTATC CAGTTTCTGAAATATAAATATGATTAATAGCTTAATACCTCCTGGTATACGGAGAATTCATTGTGATATGTTCCCATGAC AAATAAATTATAAGTTATGTATTTACAGTCAATGAATACAACTACTCGCTTGACCTGTAGTTAGACCATTTAGCCTCTTA TGTATCCTTTTTCATTCTGTTTCCTTTTCTTTGTTATATTGAGCAGCTTTCCATGCACTGGTAATCTGAACTCCGGGTTC ATGTGCTAATTACAGGGTGTATTGTTGGTTTTCTTCTCATACTATTATATATTTTTATCCATTGCAATCATCAACTAAAT GAGAATAAATTATAAAAACTGCTTCAATAAATAAACCTTGAAATATTAATTGTTCGTTGCTCTGGCTTTGTCAAGGTTTC AACTTTGAGTCAACTAATTTGTACTTCTATTCCAGGGAAAGTTATTTCTCAAGAATACATTTTGGAATATGGAAGGGACT GTCTTGAGATGCATGTTGGAGCTGTTGAATCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACG CTCTGTGCAGCTATGGACTTGCTAGGTAAAGTGTCTGTAACTGTAAGCAAAGTCTATGTTAAATGAACTGTTATTAAATC AGAATATGACATTCATGTACCTAATGTAGATTCATCAACTTTATCTCTATAGAAGTAGCT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0425300.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCGGCTTGCACAGACGAAGACCCTCGTCTCCATGGCATCCGAACTAAGATTCGCGTCGTCCCCAATTTCCCCAAATC GGGTATCATGTTCCAAGACATCACTACTCTTTTGCTCGACCCCAAAGCTTTTAAGGACACCATCGATTTGTTCGTTGAGC GATACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGGGGTTTTATTTTTGGTCCTCCCATTGCACTGGCA ATAGGAGCAAAGTTTGTACCATTGAGAAAACCAAAGAAGTTGCCTGGGAAAGTTATTTCTCAAGAATACATTTTGGAATA TGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAATCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAA CTGGTGGAACGCTCTGTGCAGCTATGGACTTGCTAGGTAAAGTGTCTGTAACTGTAAGCAAAGTCTATGTTAAATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0425300.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSACTDEDPRLHGIRTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALA IGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVESGERALVVDDLIATGGTLCAAMDLLGKVSVTVSKVYVK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11776:SF7
1 154 154 9.3E-89 –
PANTHER
PTHR11776
1 154 154 9.3E-89 –
Gene3D
G3DSA:3.40.50.2020
1 158 158 4.0E-58
IPR029057
SUPERFAMILY
SSF53271
13 157 145 3.8E-43
IPR029057
Hamap
MF_00004
14 158 145 26.806
IPR005764
CDD
cd06223
48 157 110 8.63718E-20
IPR000836
Pfam
PF00156
52 152 101 5.7E-15
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003999
Molecular function Adenine phosphoribosyltransferase activity Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006168
Biological process Adenine salvage Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0425300.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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