Domain Predictions — View

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PR01713

Source: PRINTS

Description

Nucleotide sugar epimerase signature

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0018979.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: UDP-glucuronate 4-epimerase 5-like [Cicer arietinum] gi\|502175956\|ref\|XP_004515772.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 IPR001509 IPR008089 IPR016040 NON_CYTOPLASMIC_DOMAIN PF01370 PR01713 PTHR10366 PTHR10366:SF319 SSF51735 TMhelix TRANSMEMBRANE	13
Lj0g3v0154629.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.90.25.10 IPR008089 IPR016040 PR01713 PTHR10366 PTHR10366:SF431 SSF51735	7
Lj0g3v0154629.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR008089 IPR016040 PF01370 PR01713 PTHR10366 PTHR10366:SF431 SSF51735	10
Lj2g3v1240070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucuronate 4-epimerase [Medicago truncatula] gi\|357469707\|ref\|XP_003605138.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR008089 IPR016040 NON_CYTOPLASMIC_DOMAIN PF01370 PR01713 PTHR10366 PTHR10366:SF356 SSF51735 TMhelix TRANSMEMBRANE	14
Lj3g3v2737450.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucuronate 4-epimerase [Medicago truncatula] gi\|357469707\|ref\|XP_003605138.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR008089 IPR016040 NON_CYTOPLASMIC_DOMAIN PF01370 PR01713 PTHR10366 PTHR10366:SF356 SSF51735 TMhelix TRANSMEMBRANE	14
Lj4g3v2020440.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: UDP-glucuronate 4-epimerase 1-like [Glycine max] gi\|356562525\|ref\|XP_003549520.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR008089 IPR016040 NON_CYTOPLASMIC_DOMAIN PF01370 PR01713 PTHR10366 PTHR10366:SF459 SSF51735 TMhelix TRANSMEMBRANE	14
Lj4g3v2020450.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR008089 IPR016040 PF01370 PR01713 PTHR10366 PTHR10366:SF396 SSF51735 mobidb-lite	11
LotjaGi2g1v0426700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucuronate 4-epimerase 4; TAIR: AT4G12250.1 UDP-D-glucuronate 4-epimerase 5; Swiss-Prot: sp\|Q9STI6\|GAE5_ARATH UDP-glucuronate 4-epimerase 5; TrEMBL-Plants: tr\|A0A1J7HWM4\|A0A1J7HWM4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR036291 NON_CYTOPLASMIC_DOMAIN PF01370 PR01713 PTHR43574 PTHR43574:SF31 SSF51735 TMhelix TRANSMEMBRANE mobidb-lite	14
LotjaGi2g1v0441900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucose 4-epimerase; TAIR: AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5; Swiss-Prot: sp\|O65781\|GALE2_CYATE UDP-glucose 4-epimerase GEPI48; TrEMBL-Plants: tr\|A0A0L9TAX6\|A0A0L9TAX6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0441900	Domains G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR005886 IPR016040 IPR036291 PF16363 PR01713 PTHR43725 PTHR43725:SF17 SSF51735 TIGR01179 cd05247 mobidb-lite	13
LotjaGi2g1v0441900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucose 4-epimerase; TAIR: AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5; Swiss-Prot: sp\|O65781\|GALE2_CYATE UDP-glucose 4-epimerase GEPI48; TrEMBL-Plants: tr\|A0A0L9TAX6\|A0A0L9TAX6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0441900	Domains G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR005886 IPR016040 IPR036291 PF16363 PR01713 PTHR43725 PTHR43725:SF17 SSF51735 TIGR01179 cd05247 mobidb-lite	13
LotjaGi3g1v0434400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucuronate 4-epimerase 4; TAIR: AT4G00110.1 UDP-D-glucuronate 4-epimerase 3; Swiss-Prot: sp\|O81312\|GAE3_ARATH UDP-glucuronate 4-epimerase 3; TrEMBL-Plants: tr\|G7JEN3\|G7JEN3_MEDTR UDP-D-glucuronate 4-epimerase; Found in the gene: LotjaGi3g1v0434400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR036291 NON_CYTOPLASMIC_DOMAIN PF01370 PR01713 PTHR43574 PTHR43574:SF37 SSF51735 TMhelix TRANSMEMBRANE	13
LotjaGi4g1v0215200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucuronate 4-epimerase 4; TAIR: AT1G02000.1 UDP-D-glucuronate 4-epimerase 2; Swiss-Prot: sp\|Q9LPC1\|GAE2_ARATH UDP-glucuronate 4-epimerase 2; TrEMBL-Plants: tr\|A0A072V0K9\|A0A072V0K9_MEDTR UDP-D-glucuronate 4-epimerase; Found in the gene: LotjaGi4g1v0215200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR036291 NON_CYTOPLASMIC_DOMAIN PF01370 PR01713 PTHR43574 PTHR43574:SF31 SSF51735 TMhelix TRANSMEMBRANE	13
LotjaGi4g1v0292800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucuronate 4-epimerase 4; TAIR: AT4G30440.1 UDP-D-glucuronate 4-epimerase 1; Swiss-Prot: sp\|Q9M0B6\|GAE1_ARATH UDP-glucuronate 4-epimerase 1; TrEMBL-Plants: tr\|I1MSX9\|I1MSX9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0292800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR016040 IPR036291 NON_CYTOPLASMIC_DOMAIN PF16363 PR01713 PTHR43574 PTHR43574:SF36 SSF51735 TMhelix TRANSMEMBRANE	13
LotjaGi6g1v0040500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	UDP-glucuronate 4-epimerase 4; TAIR: AT3G23820.1 UDP-D-glucuronate 4-epimerase 6; Swiss-Prot: sp\|Q9LIS3\|GAE6_ARATH UDP-glucuronate 4-epimerase 6; TrEMBL-Plants: tr\|G7JA85\|G7JA85_MEDTR UDP-D-glucuronate 4-epimerase; Found in the gene: LotjaGi6g1v0040500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.720 G3DSA:3.90.25.10 IPR001509 IPR036291 NON_CYTOPLASMIC_DOMAIN PF01370 PR01713 PTHR43574 PTHR43574:SF28 SSF51735 TMhelix TRANSMEMBRANE	13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	7.14