Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0020100.3

Overview

Field Value
Gene ID LotjaGi3g1v0020100
Transcript ID LotjaGi3g1v0020100.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Dihydroflavonol reductase; TAIR: AT4G35420.1 dihydroflavonol 4-reductase-like1; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|G7IUM5|G7IUM5_MEDTR Dihydroflavonol reductase; Found in the gene: LotjaGi3g1v0020100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:2080174..2082352) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCACTGGCACATACAGGGAAGCAGAAGAAAGTTGAACATTTATGGAAGCTAGAAGGAGCAAAAGAAAGACTGCAACT TGTTCAAGCCGATTTAATGGAAGAAAACAGCTTCGACAATGCCATCATGGGATGCAAAGGTGTCTTCCACATTGCCTCTC CTGTCCTAAAGCATATCTCAGATCCTAAGGTATAATATAATATGTCTATACTCTTTCTCTGTGTTTACAAACTTATCCAA ATTATCACAACACAACATGCATACTACACTAAGTATCAATTTTATCCAAAAATACAGTTAGAAGTTGTGGAACCTGCAGT CCAAGGTACGCTAAATGTGCTGCATTCATGTCGCAAGAACCCGGCCCTTGTTCGAGTGGTTTTAACCTCATCATCTTCAA CTATTCGAGTAAGAGAGGATCTTGATCCAAACATACCTCTAGATGAGTCTTCCTGGAGCTCCTTGGAATTATGTGAGAAA CTGCAGGTACATAGATAATGCTTAAGTGATCATACAATATACATAAAAGATTTGGACCGCGCACAATCTTAGGTGACATT CAGCTTTGTGATGGTTTTTTACCTTCACTTTGTGATCCTTAAAAACTGCCACAAAAGTGTATATTGAACGGTATCACCCT TTACGGCATGGTTCATTATCATGATTGTATAAATTAAGGTTCTCTAATGTGAATTTGAAAGTGTAAAAGTAAGAGAGGAT CCTATGAGTTAATATTACAACAATATTTTAAATTACAATCCTAATTTTGCCTTAATTGGTCACTTTTTTCATAAGAAATC ATAGTTCTAATTGGTAACATGTATTGAAGGCATGGTACCCAATGTCAAAGACACAAGCAGAAAGAGCAGCATGGGAATAC TGCAAAGAGAATGGAATACATTTAGTGACTGTTCTTCCATCATTCATCATTGGACCAAGCTTGCCACCAGATTTGTGTTC TACTGCATCTGATGTTCTAGGCCTTCTCAAAGGTAAATAAAACACACTGTGCTCTATAAGGTGGTAAGTTTTCTGTGAGT AATGGTTATTGTTGTAATTAATTAACAGGGGAAACAGAGAAATTTCAATGGCATGGAAGAATGGGTTATGTTCATATTGA TGATGTTGCCCTTTGTCACATTCTTCTTTTTGAAAATGAAGCCTCCCATGGCAGATACCTTTGTAGCTCTACAGTCATGG ATAATGACGATTTGGTTGCCTTGTTAGCAACACGTTATCCTAGCTTGCCTATCCCAAAAAGGTTGGTTAATGCTTCTCAC TTGCACTCTAAGTAACCGTAAGTACAATTAAACACTGGTTTTAAACTGTTAATCATGAGTGTGAACATTAAGATTGAATT CAAGAAAAACCTTTTTTTAAGTGCTATCCTCTCATAATTGAATATAATAAAATTATTGTTTGGGGTAATAAGTTTCATGT CACGACATATAATAAGGAGTTTTGAAATTGAACTTTTTTTTCCTAATTGTTGTCCTCTCTTATAATTGAACAACAAGTGG TAGCTCAATGTAATAACTGTCATGTCATGATAGATAACAGTAATGGATTTTTAAATTAGCATTTTAGTGCTTAATAAAGA GAGGGCAACACAATTGTCTAAATAAGAGAGAACATGAGAGAGCTACCATTTGAAATAAGTGATTAAGTTATTTATCTAAA TTATTAAAAAAAAGGTATTTACCTAAACGCACAGTGTATCTTTGATCAATTAACTGGCCTTTTTACTGTGATTATTACGT CTAACAATTTTAATATATTCACACTTTACTTTTTCTTCATTTCACTCATTTTCTTCTTATTTCTCTTTTTTTTTTTCCAT TACACCACCAATCATATGCCCACTTCTTTATTTTCTATCTCCATCTCTCTATAGTTGATGTGAACAAACAAATTTCCTTA AGTCAATTATAATACTAAAATCTAAAAAGTAAAAACAGCTTTGATTTTTTTTTTCTTTTTTGCATAATGTAGTAAGTATC CTTTATTTGATTTTCAGGTTCCAGAAACTAGATAGGCCACATTATGATCTAAACATCGGAAAACTGAGCAGCCTGGGATT CAAGTTTAAGTCTGTTGAAGAAATGTTTGATGATTGCATTGCATCGCTTGTGGAGCAAGGCCATCTCAAATTCAAATGAG CTTCCATGTTTTTAGATGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0020100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCACTGGCACATACAGGGAAGCAGAAGAAAGTTGAACATTTATGGAAGCTAGAAGGAGCAAAAGAAAGACTGCAACT TGTTCAAGCCGATTTAATGGAAGAAAACAGCTTCGACAATGCCATCATGGGATGCAAAGGTGTCTTCCACATTGCCTCTC CTGTCCTAAAGCATATCTCAGATCCTAAGTTAGAAGTTGTGGAACCTGCAGTCCAAGGTACGCTAAATGTGCTGCATTCA TGTCGCAAGAACCCGGCCCTTGTTCGAGTGGTTTTAACCTCATCATCTTCAACTATTCGAGTAAGAGAGGATCTTGATCC AAACATACCTCTAGATGAGTCTTCCTGGAGCTCCTTGGAATTATGTGAGAAACTGCAGGCATGGTACCCAATGTCAAAGA CACAAGCAGAAAGAGCAGCATGGGAATACTGCAAAGAGAATGGAATACATTTAGTGACTGTTCTTCCATCATTCATCATT GGACCAAGCTTGCCACCAGATTTGTGTTCTACTGCATCTGATGTTCTAGGCCTTCTCAAAGGGGAAACAGAGAAATTTCA ATGGCATGGAAGAATGGGTTATGTTCATATTGATGATGTTGCCCTTTGTCACATTCTTCTTTTTGAAAATGAAGCCTCCC ATGGCAGATACCTTTGTAGCTCTACAGTCATGGATAATGACGATTTGGTTGCCTTGTTAGCAACACGTTATCCTAGCTTG CCTATCCCAAAAAGGTTCCAGAAACTAGATAGGCCACATTATGATCTAAACATCGGAAAACTGAGCAGCCTGGGATTCAA GTTTAAGTCTGTTGAAGAAATGTTTGATGATTGCATTGCATCGCTTGTGGAGCAAGGCCATCTCAAATTCAAATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0020100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALAHTGKQKKVEHLWKLEGAKERLQLVQADLMEENSFDNAIMGCKGVFHIASPVLKHISDPKLEVVEPAVQGTLNVLHS CRKNPALVRVVLTSSSSTIRVREDLDPNIPLDESSWSSLELCEKLQAWYPMSKTQAERAAWEYCKENGIHLVTVLPSFII GPSLPPDLCSTASDVLGLLKGETEKFQWHGRMGYVHIDDVALCHILLFENEASHGRYLCSSTVMDNDDLVALLATRYPSL PIPKRFQKLDRPHYDLNIGKLSSLGFKFKSVEEMFDDCIASLVEQGHLKFK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.720
2 291 290 2.3E-86 –
CDD
cd08958
6 266 261 9.52728E-123 –
PANTHER
PTHR10366
6 286 281 9.8E-121 –
PANTHER
PTHR10366:SF657
6 286 281 9.8E-121
IPR033267
SUPERFAMILY
SSF51735
6 282 277 2.12E-46
IPR036291
Pfam
PF01370
18 211 194 5.0E-15
IPR001509

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009555
Biological process Pollen development The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.
Subterm of
GO:0050662
Molecular function Coenzyme binding Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.
Subterm of
GO:0080110
Biological process Sporopollenin biosynthetic process The chemical reactions and pathways resulting in the formation of sporopollenin, a primary constituent of the pollen exine layer.
Subterm of
Part of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0020100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…