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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0020100 |
| Transcript ID | LotjaGi3g1v0020100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydroflavonol 4-reductase family; TAIR: AT4G35420.1 dihydroflavonol 4-reductase-like1; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|G7IUM5|G7IUM5_MEDTR Dihydroflavonol reductase; Found in the gene: LotjaGi3g1v0020100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2079311..2082348) extracted from Lotus japonicus Gifu genome v1.2.
TGTGACATGGAACACAATGGCAAAGGCAGAGTTTGTGTGACAGGGGCCTCAGGCTATCTAGCTTCTTGGCTTATTAAGCA ACTTCTTTTGTCTGGTTATCATGTTGTTGGAACAGTTAGAGATTTAGGTTCTTTTCCCTCTCCCTCTCTCTTGCATCAAA ATCTTGAACTAGTTTGTACAGCTCTCTTATAATTTCCATCAATCAAATATCAAATTAATTTAACTACTTCATCACAATTC CTACCCGAAACCGGATTCGGATATCCAGGAGTAAATTCTCACCATCAAGGGATATGAGTTGTTTGATCAACATCGGACAT TTTAAATTTCAAGTTTATCTAAGCCATCAGGTTTCTATGAAACTTTTGAGTCGTCCGATCTTTGATCAAATAGCTCATAT TAACTAGTCAATCACAACTCCCATCCAAAACCAGATTTGGATTCCTGAAGAAAATCCTAATTCACACGGTCAAGGAATAT TTTGATGAAAATCTGAGCTTTCTATTCTTTTGATCGGACAACTCAAATAACTTGAGCGTGTGAGTTTATAATTTTCTGCA CAGTAAATAAGTTAAATCTCTCATTTTTTAGTATCCATTGAGGTATTTTCACCTAATAGTTTGTGCTTTTCTTTTTTTGG GTTAGTTATAAGTGATCTAGACTAGTATTACTCTAGCACCTTAGATTTTCCCTTTGTTAAGACTTAAGACTATATACTTG GCTAAGCATATGACAAATGAAAATGAGTTCTGAGAGCTTTTTTTTTTTACTATGTTCAAATATATTCTCAATTTATACAT GCTCAACAATGTAGCATATACATGTTAATTACATTAAAGACATTCATTCATTCATACATATCCATGGCACTGGCACATAC AGGGAAGCAGAAGAAAGTTGAACATTTATGGAAGCTAGAAGGAGCAAAAGAAAGACTGCAACTTGTTCAAGCCGATTTAA TGGAAGAAAACAGCTTCGACAATGCCATCATGGGATGCAAAGGTGTCTTCCACATTGCCTCTCCTGTCCTAAAGCATATC TCAGATCCTAAGGTATAATATAATATGTCTATACTCTTTCTCTGTGTTTACAAACTTATCCAAATTATCACAACACAACA TGCATACTACACTAAGTATCAATTTTATCCAAAAATACAGTTAGAAGTTGTGGAACCTGCAGTCCAAGGTACGCTAAATG TGCTGCATTCATGTCGCAAGAACCCGGCCCTTGTTCGAGTGGTTTTAACCTCATCATCTTCAACTATTCGAGTAAGAGAG GATCTTGATCCAAACATACCTCTAGATGAGTCTTCCTGGAGCTCCTTGGAATTATGTGAGAAACTGCAGGTACATAGATA ATGCTTAAGTGATCATACAATATACATAAAAGATTTGGACCGCGCACAATCTTAGGTGACATTCAGCTTTGTGATGGTTT TTTACCTTCACTTTGTGATCCTTAAAAACTGCCACAAAAGTGTATATTGAACGGTATCACCCTTTACGGCATGGTTCATT ATCATGATTGTATAAATTAAGGTTCTCTAATGTGAATTTGAAAGTGTAAAAGTAAGAGAGGATCCTATGAGTTAATATTA CAACAATATTTTAAATTACAATCCTAATTTTGCCTTAATTGGTCACTTTTTTCATAAGAAATCATAGTTCTAATTGGTAA CATGTATTGAAGGCATGGTACCCAATGTCAAAGACACAAGCAGAAAGAGCAGCATGGGAATACTGCAAAGAGAATGGAAT ACATTTAGTGACTGTTCTTCCATCATTCATCATTGGACCAAGCTTGCCACCAGATTTGTGTTCTACTGCATCTGATGTTC TAGGCCTTCTCAAAGGTAAATAAAACACACTGTGCTCTATAAGGTGGTAAGTTTTCTGTGAGTAATGGTTATTGTTGTAA TTAATTAACAGGGGAAACAGAGAAATTTCAATGGCATGGAAGAATGGGTTATGTTCATATTGATGATGTTGCCCTTTGTC ACATTCTTCTTTTTGAAAATGAAGCCTCCCATGGCAGATACCTTTGTAGCTCTACAGTCATGGATAATGACGATTTGGTT GCCTTGTTAGCAACACGTTATCCTAGCTTGCCTATCCCAAAAAGGTTGGTTAATGCTTCTCACTTGCACTCTAAGTAACC GTAAGTACAATTAAACACTGGTTTTAAACTGTTAATCATGAGTGTGAACATTAAGATTGAATTCAAGAAAAACCTTTTTT TAAGTGCTATCCTCTCATAATTGAATATAATAAAATTATTGTTTGGGGTAATAAGTTTCATGTCACGACATATAATAAGG AGTTTTGAAATTGAACTTTTTTTTCCTAATTGTTGTCCTCTCTTATAATTGAACAACAAGTGGTAGCTCAATGTAATAAC TGTCATGTCATGATAGATAACAGTAATGGATTTTTAAATTAGCATTTTAGTGCTTAATAAAGAGAGGGCAACACAATTGT CTAAATAAGAGAGAACATGAGAGAGCTACCATTTGAAATAAGTGATTAAGTTATTTATCTAAATTATTAAAAAAAAGGTA TTTACCTAAACGCACAGTGTATCTTTGATCAATTAACTGGCCTTTTTACTGTGATTATTACGTCTAACAATTTTAATATA TTCACACTTTACTTTTTCTTCATTTCACTCATTTTCTTCTTATTTCTCTTTTTTTTTTTCCATTACACCACCAATCATAT GCCCACTTCTTTATTTTCTATCTCCATCTCTCTATAGTTGATGTGAACAAACAAATTTCCTTAAGTCAATTATAATACTA AAATCTAAAAAGTAAAAACAGCTTTGATTTTTTTTTTCTTTTTTGCATAATGTAGTAAGTATCCTTTATTTGATTTTCAG GTTCCAGAAACTAGATAGGCCACATTATGATCTAAACATCGGAAAACTGAGCAGCCTGGGATTCAAGTTTAAGTCTGTTG AAGAAATGTTTGATGATTGCATTGCATCGCTTGTGGAGCAAGGCCATCTCAAATTCAAATGAGCTTCCATGTTTTTAG
CDS sequence (LotjaGi3g1v0020100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACACAATGGCAAAGGCAGAGTTTGTGTGACAGGGGCCTCAGGCTATCTAGCTTCTTGGCTTATTAAGCAACTTCT TTTGTCTGGTTATCATGTTGTTGGAACAGTTAGAGATTTAGGGAAGCAGAAGAAAGTTGAACATTTATGGAAGCTAGAAG GAGCAAAAGAAAGACTGCAACTTGTTCAAGCCGATTTAATGGAAGAAAACAGCTTCGACAATGCCATCATGGGATGCAAA GGTGTCTTCCACATTGCCTCTCCTGTCCTAAAGCATATCTCAGATCCTAAGAAGAACCCGGCCCTTGTTCGAGTGGTTTT AACCTCATCATCTTCAACTATTCGAGTAAGAGAGGATCTTGATCCAAACATACCTCTAGATGAGTCTTCCTGGAGCTCCT TGGAATTATGTGAGAAACTGCAGGCATGGTACCCAATGTCAAAGACACAAGCAGAAAGAGCAGCATGGGAATACTGCAAA GAGAATGGAATACATTTAGTGACTGTTCTTCCATCATTCATCATTGGACCAAGCTTGCCACCAGATTTGTGTTCTACTGC ATCTGATGTTCTAGGCCTTCTCAAAGGGGAAACAGAGAAATTTCAATGGCATGGAAGAATGGGTTATGTTCATATTGATG ATGTTGCCCTTTGTCACATTCTTCTTTTTGAAAATGAAGCCTCCCATGGCAGATACCTTTGTAGCTCTACAGTCATGGAT AATGACGATTTGGTTGCCTTGTTAGCAACACGTTATCCTAGCTTGCCTATCCCAAAAAGGTTCCAGAAACTAGATAGGCC ACATTATGATCTAAACATCGGAAAACTGAGCAGCCTGGGATTCAAGTTTAAGTCTGTTGAAGAAATGTTTGATGATTGCA TTGCATCGCTTGTGGAGCAAGGCCATCTCAAATTCAAATGA
Protein sequence (LotjaGi3g1v0020100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEHNGKGRVCVTGASGYLASWLIKQLLLSGYHVVGTVRDLGKQKKVEHLWKLEGAKERLQLVQADLMEENSFDNAIMGCK GVFHIASPVLKHISDPKKNPALVRVVLTSSSSTIRVREDLDPNIPLDESSWSSLELCEKLQAWYPMSKTQAERAAWEYCK ENGIHLVTVLPSFIIGPSLPPDLCSTASDVLGLLKGETEKFQWHGRMGYVHIDDVALCHILLFENEASHGRYLCSSTVMD NDDLVALLATRYPSLPIPKRFQKLDRPHYDLNIGKLSSLGFKFKSVEEMFDDCIASLVEQGHLKFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 306 | 306 | 5.4E-90 | – | |
| PANTHER | 4 | 301 | 298 | 3.9E-131 | – | |
| PANTHER | 4 | 301 | 298 | 3.9E-131 | ||
| SUPERFAMILY | 6 | 297 | 292 | 6.16E-54 | ||
| CDD | 9 | 281 | 273 | 1.34924E-130 | – | |
| Pfam | 11 | 88 | 78 | 4.5E-8 | ||
| Pfam | 104 | 226 | 123 | 1.6E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Pollen development | The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. | ||
| Biological process | Sporopollenin biosynthetic process | The chemical reactions and pathways resulting in the formation of sporopollenin, a primary constituent of the pollen exine layer. |
Expression pattern of LotjaGi3g1v0020100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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