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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0055800 |
| Transcript ID | LotjaGi3g1v0055800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT1G16380.1 Cation/hydrogen exchanger family protein; Swiss-Prot: sp|Q9SA37|CHX1_ARATH Cation/H(+) antiporter 1; TrEMBL-Plants: tr|I1LVH1|I1LVH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5864430..5867197) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACGCCACTCACACAATGTTTTGTGACAATGATCTGGTTAACCCTCTAAGCTCCATGGGCATGCAAGTTTCCTGCAT TCTTGTTGTCTCACACGTCTTCAACGTGGTGCTTAGAACAGTTGGTCAACCTGGACCCATTGCACAAATTCTGGTAATCA ATCAATCAATTAATCACCTTAATTTTGTTAATTAAGTACATTTTTTGTATTGAATTATATTTTAATTAATTCTTGGTGCA TTGTTTAACAGGCAGGGTTGGTACTAGGTCCAATGTCTCATATAGAGTATATACAAGCAACATTTTTTCCTGCAAGTTCC ATAAATTACTATGAAGTTGTGAGCTTTTTCTGTAGAATACATTTCATGTTCTTATTTGGGTTAGAGATGAACATTCACTA CACAATGCGCAATCTACGCTTGGTTAGCTTGGTAGCCTGTGGTGGTGCCCTAATGGGTGGTGTTTTTGGTCTATCTGTGT CCTTTTATTTGTATCAAGAGTTAGACACAGATGCCCCAATATATTATTTTTGTATGATTATTATGCTAGTGGTTTCATAC ACAAGCTCTCCCATGGTGATTCGTTTGGCAGCGGAATTGAGGTTTGCTGCATCGGGTATTGGGCGAATCGCGGTGTCCTC TGCACTGATTACAGAAATCGGTTGCTTGGTGTTCTTCAATGTGATGGTTAATTGGAAAAGAGAAAACCACATTTCAGCTG GTTTTGGTTGCATTATCATTACAGCCCTGGTGATTTTGATAAACAGGTACTTAGCTGTTTGGTTAAACACACGGAATCGG AACCAGAAGTACCTTAAGGCACCTGAGCTGTTACTCATCCTGTTTCTGCTTCTGGCGAGCTCAATGATTATTGAGATTTG GGGTTACAATAGTATCATTAGTTGCTTCATCATTGGCTTGATGTTTCCTAAGGAAGGCAAAACGGCTAGAACATTGGTGC ATAAGCTTGGTTATTCTATTTATAACTTTGTGCTTCCAGTGTACTTTGGCTACTTGGGTTTGCAATGTGACCTCATATAT GTCTTCCGGAGCTTGAACCGGATGGCGAACACGGCCATATTGATCTTGTTGAGCATTGGCAGCAAGCTTGGAGGCACTCT TGTGGTTTGCCGTTCCCTTCGGATTCCCACAAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCTG ATCTGCTATTCATTGGTGCAGCAGCAAAGCAAATCATTGTGAGTATATTTCCTATAAATTGATTGGGTTAGGCTGTGTTT GGAAGAGCGTATTTGAGCTTATCTTATGACTTGTGCAAGTGCTTGGGCGAGCTTATGAAAATTGCTTATGACCTACGTAT TATCTGTTTTGAGCTTATTTTCATAAGCTGTTCATATTAACTAATGAATAAGTGTTTATACCTACTACCTATAAGATATT TTGAACTCAAATTAGCTTATGGATAAGCTCTTCATAAAATTGTTTACCCAAATATACCCTTAATATGAAGTAGAATATAA AGTATATGATAATTAAGTGGCTCTTGTGTTGATTTGCAGACGTTTGATTCAGAGGCTTACAATGTGTTGTTAGTATCAAT AGTTTTGAACACGATAATATCAGGAATAATTGTGGCTTTTCTAGCAAGGGGGGAAGAGAAAATGTTTGCAAACAACCACA CTGCAATTGAGCCTCAGCAAATGGAGGATGAGCTTCGAATTCTTGCCTGTGTATATGATCCGCGTCAAGTATCTGCTATA CTCGCGACAGTGCTAGCAATGCACGGCACGAGAGCATCACCATCCACCACTTATTTGATGCACCTAATAGAGCTTGTGAA GAAGATCAAGTCTAACTTATTATACCATGAAAAAGAAAACGCTGACATTAGCGACGATGATGACTATGGTGGCAATGATG TTGTGGAAATCAATAATGCTTTAGATGCCTTCACTGCAGACACAGCGATTTTGGTCCACCAAAGAAGGGCAGTGTCTCCT TTCCCAAGTTTGTATGAAGATGTTTGCAATGAAGCAGAGGATCTTCAAGTGTCCATCATTCTACTTCCCTTCCACAAGCA TCAGCGAATCGATGGAAAATTGGAAAGTGGGAAGGAAGGTATAAGGATTACCAATCAGAAGGTTCTTAGACATGCTCCTT GTTCTGTTGGTGTCATTGTAGAAAGAGGACTTGCAAAGGTCCCTGGTTTCTCACAGTTAGTTGCATCTGAAGCCATACAA AATATTGCAACACTTTTCTTCGGAGGCCCGGATGATCGTGAAGCTATCGCTTGGAGCCTACGCATTTCCAAAAGCCCTCG AGTTAACTTAACGATCATCAGATTTCTGCTGTCTTCTTCTTCATCATCACAGAACGAACCAATTGAAAGTGGACAATCTG AGGACAAAGAAATTCTAATGTCCTTGTCTGGGGAAGAGACAGTGAATGAGATTGACAACACCTTTATGGTTGATTTCTAT AATAGGTATGTAACCTCAGGCCAAATTGGATATGTGGAGAAGTTTGTGAAGGATGGAGCAGAAACAGTGGACTCTTTGAA AGAGATAGGGGACATGTACTCTTTGTTTATAGTAGGAAAGGGTGGTAGAGGAAATAGTTCATTAACAATAGGTATGAGTG ATTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCTTCTTCAGACTTTGATATTCATGGCTCAGTTTTG GTCATTCAACAGCATAGAGATGCCAAGAAAGGCCTAATGCACGATTAG
CDS sequence (LotjaGi3g1v0055800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGCCACTCACACAATGTTTTGTGACAATGATCTGGTTAACCCTCTAAGCTCCATGGGCATGCAAGTTTCCTGCAT TCTTGTTGTCTCACACGTCTTCAACGTGGTGCTTAGAACAGTTGGTCAACCTGGACCCATTGCAGGGTTGGTACTAGGTC CAATGTCTCATATAGAGTATATACAAGCAACATTTTTTCCTGCAAGTTCCATAAATTACTATGAAGTTGTGAGCTTTTTC TGTAGAATACATTTCATGTTCTTATTTGGGTTAGAGATGAACATTCACTACACAATGCGCAATCTACGCTTGGTTAGCTT GGTAGCCTGTGGTGGTGCCCTAATGGGTGGTGTTTTTGGTCTATCTGTGTCCTTTTATTTGTATCAAGAGTTAGACACAG ATGCCCCAATATATTATTTTTGTATGATTATTATGCTAGTGGTTTCATACACAAGCTCTCCCATGGTGATTCGTTTGGCA GCGGAATTGAGGTTTGCTGCATCGGGTATTGGGCGAATCGCGGTGTCCTCTGCACTGATTACAGAAATCGGTTGCTTGGT GTTCTTCAATGTGATGGTTAATTGGAAAAGAGAAAACCACATTTCAGCTGGTTTTGGTTGCATTATCATTACAGCCCTGG TGATTTTGATAAACAGGTACTTAGCTGTTTGGTTAAACACACGGAATCGGAACCAGAAGTACCTTAAGGCACCTGAGCTG TTACTCATCCTGTTTCTGCTTCTGGCGAGCTCAATGATTATTGAGATTTGGGGTTACAATAGTATCATTAGTTGCTTCAT CATTGGCTTGATGTTTCCTAAGGAAGGCAAAACGGCTAGAACATTGGTGCATAAGCTTGGTTATTCTATTTATAACTTTG TGCTTCCAGTGTACTTTGGCTACTTGGGTTTGCAATGTGACCTCATATATGTCTTCCGGAGCTTGAACCGGATGGCGAAC ACGGCCATATTGATCTTGTTGAGCATTGGCAGCAAGCTTGGAGGCACTCTTGTGGTTTGCCGTTCCCTTCGGATTCCCAC AAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCTGATCTGCTATTCATTGGTGCAGCAGCAAAGC AAATCATTACGTTTGATTCAGAGGCTTACAATGTGTTGTTAGTATCAATAGTTTTGAACACGATAATATCAGGAATAATT GTGGCTTTTCTAGCAAGGGGGGAAGAGAAAATGTTTGCAAACAACCACACTGCAATTGAGCCTCAGCAAATGGAGGATGA GCTTCGAATTCTTGCCTGTGTATATGATCCGCGTCAAGTATCTGCTATACTCGCGACAGTGCTAGCAATGCACGGCACGA GAGCATCACCATCCACCACTTATTTGATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCTAACTTATTATACCATGAA AAAGAAAACGCTGACATTAGCGACGATGATGACTATGGTGGCAATGATGTTGTGGAAATCAATAATGCTTTAGATGCCTT CACTGCAGACACAGCGATTTTGGTCCACCAAAGAAGGGCAGTGTCTCCTTTCCCAAGTTTGTATGAAGATGTTTGCAATG AAGCAGAGGATCTTCAAGTGTCCATCATTCTACTTCCCTTCCACAAGCATCAGCGAATCGATGGAAAATTGGAAAGTGGG AAGGAAGGTATAAGGATTACCAATCAGAAGGTTCTTAGACATGCTCCTTGTTCTGTTGGTGTCATTGTAGAAAGAGGACT TGCAAAGGTCCCTGGTTTCTCACAGTTAGTTGCATCTGAAGCCATACAAAATATTGCAACACTTTTCTTCGGAGGCCCGG ATGATCGTGAAGCTATCGCTTGGAGCCTACGCATTTCCAAAAGCCCTCGAGTTAACTTAACGATCATCAGATTTCTGCTG TCTTCTTCTTCATCATCACAGAACGAACCAATTGAAAGTGGACAATCTGAGGACAAAGAAATTCTAATGTCCTTGTCTGG GGAAGAGACAGTGAATGAGATTGACAACACCTTTATGGTTGATTTCTATAATAGGTATGTAACCTCAGGCCAAATTGGAT ATGTGGAGAAGTTTGTGAAGGATGGAGCAGAAACAGTGGACTCTTTGAAAGAGATAGGGGACATGTACTCTTTGTTTATA GTAGGAAAGGGTGGTAGAGGAAATAGTTCATTAACAATAGGTATGAGTGATTGGGAGGAGTGTCCAGAACTTGGAACAGT TGGTGATGTCTTGGCTTCTTCAGACTTTGATATTCATGGCTCAGTTTTGGTCATTCAACAGCATAGAGATGCCAAGAAAG GCCTAATGCACGATTAG
Protein sequence (LotjaGi3g1v0055800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDATHTMFCDNDLVNPLSSMGMQVSCILVVSHVFNVVLRTVGQPGPIAGLVLGPMSHIEYIQATFFPASSINYYEVVSFF CRIHFMFLFGLEMNIHYTMRNLRLVSLVACGGALMGGVFGLSVSFYLYQELDTDAPIYYFCMIIMLVVSYTSSPMVIRLA AELRFAASGIGRIAVSSALITEIGCLVFFNVMVNWKRENHISAGFGCIIITALVILINRYLAVWLNTRNRNQKYLKAPEL LLILFLLLASSMIIEIWGYNSIISCFIIGLMFPKEGKTARTLVHKLGYSIYNFVLPVYFGYLGLQCDLIYVFRSLNRMAN TAILILLSIGSKLGGTLVVCRSLRIPTSEGIFLGFILNTRGYADLLFIGAAAKQIITFDSEAYNVLLVSIVLNTIISGII VAFLARGEEKMFANNHTAIEPQQMEDELRILACVYDPRQVSAILATVLAMHGTRASPSTTYLMHLIELVKKIKSNLLYHE KENADISDDDDYGGNDVVEINNALDAFTADTAILVHQRRAVSPFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESG KEGIRITNQKVLRHAPCSVGVIVERGLAKVPGFSQLVASEAIQNIATLFFGGPDDREAIAWSLRISKSPRVNLTIIRFLL SSSSSSQNEPIESGQSEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGAETVDSLKEIGDMYSLFI VGKGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLMHD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 774 | 774 | 0.0 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 774 | 774 | 0.0 | – | |
| Gene3D | 19 | 413 | 395 | 2.6E-42 | ||
| Phobius | 20 | 38 | 19 | - | – | |
| Phobius | 39 | 44 | 6 | - | – | |
| Phobius | 45 | 65 | 21 | - | – | |
| Pfam | 46 | 405 | 360 | 8.8E-29 | ||
| Phobius | 66 | 70 | 5 | - | – | |
| Phobius | 71 | 91 | 21 | - | – | |
| Phobius | 92 | 102 | 11 | - | – | |
| Phobius | 103 | 125 | 23 | - | – | |
| TMHMM | 103 | 125 | 23 | - | – | |
| Phobius | 126 | 136 | 11 | - | – | |
| TMHMM | 135 | 157 | 23 | - | – | |
| Phobius | 137 | 161 | 25 | - | – | |
| Phobius | 162 | 172 | 11 | - | – | |
| TMHMM | 169 | 191 | 23 | - | – | |
| Phobius | 173 | 195 | 23 | - | – | |
| Phobius | 196 | 200 | 5 | - | – | |
| TMHMM | 201 | 223 | 23 | - | – | |
| Phobius | 201 | 221 | 21 | - | – | |
| Phobius | 222 | 240 | 19 | - | – | |
| TMHMM | 240 | 270 | 31 | - | – | |
| Phobius | 241 | 270 | 30 | - | – | |
| Phobius | 271 | 289 | 19 | - | – | |
| Phobius | 290 | 312 | 23 | - | – | |
| TMHMM | 290 | 312 | 23 | - | – | |
| Phobius | 313 | 318 | 6 | - | – | |
| Phobius | 319 | 339 | 21 | - | – | |
| Phobius | 340 | 350 | 11 | - | – | |
| Phobius | 351 | 371 | 21 | - | – | |
| Phobius | 372 | 382 | 11 | - | – | |
| TMHMM | 383 | 405 | 23 | - | – | |
| Phobius | 383 | 405 | 23 | - | – | |
| Phobius | 406 | 778 | 373 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0055800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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