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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR32468
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 78 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.022s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0124129.1
n.a. PREDICTED: cation/H(+) antiporter 15-like [Cicer arietinum] gi|502161119|ref|XP_004512035.1| chr0 55722242 55722652 -
1 domain prediction
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Lj0g3v0178899.1
n.a. Cation proton exchanger [Medicago truncatula] gi|357519983|ref|XP_003630280.1| chr0 86807723 86810639 +
1 domain prediction
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Lj0g3v0181129.1
n.a. PREDICTED: cation/H(+) antiporter 4-like [Cicer arietinum] gi|502141064|ref|XP_004504433.1| chr0 88302224 88305598 +
1 domain prediction
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Lj0g3v0193629.1
n.a. PREDICTED: cation/H(+) antiporter 28-like [Glycine max] gi|356537296|ref|XP_003537165.1| chr0 94559534 94563968 -
1 domain prediction
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Lj0g3v0217229.1
n.a. PREDICTED: cation/H(+) antiporter 20-like [Cicer arietinum] gi|502111253|ref|XP_004494000.1| chr0 110516954 110517847 -
1 domain prediction
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Lj0g3v0217239.1
n.a. K(+)/H(+) antiporter [Medicago truncatula] gi|357510413|ref|XP_003625495.1| chr0 110517840 110523135 -
1 domain prediction
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Lj0g3v0229469.1
n.a. PREDICTED: cation/H(+) antiporter 15-like [Glycine max] gi|356527917|ref|XP_003532552.1| chr0 118800282 118801283 +
1 domain prediction
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Lj0g3v0254509.1
n.a. K(+)/H(+) antiporter [Medicago truncatula] gi|357493727|ref|XP_003617152.1| chr0 132156014 132156593 -
1 domain prediction
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Lj0g3v0298569.1
n.a. Cation proton exchanger [Medicago truncatula] gi|357458005|ref|XP_003599283.1| chr0 155139006 155139728 -
1 domain prediction
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Lj0g3v0308889.1
n.a. PREDICTED: cation/H(+) antiporter 24-like [Cicer arietinum] gi|502129485|ref|XP_004500320.1| chr0 161333325 161335513 +
1 domain prediction
 –
Lj0g3v0329399.1
n.a. Cation/H+ exchanger [Medicago truncatula] gi|357458003|ref|XP_003599282.1| chr0 172214306 172215840 +
1 domain prediction
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Lj0g3v0330179.1
n.a. PREDICTED: cation/H(+) antiporter 4-like [Cicer arietinum] gi|502164764|ref|XP_004513252.1| chr0 172610314 172611783 -
1 domain prediction
 –
Lj0g3v0330349.1
n.a. Cation proton exchanger [Medicago truncatula] gi|357461421|ref|XP_003600992.1| chr0 172666003 172666766 +
1 domain prediction
 –
Lj0g3v0330359.1
n.a. PREDICTED: cation/H(+) antiporter 15-like [Cicer arietinum] gi|502130073|ref|XP_004500521.1| chr0 172671092 172671640 +
1 domain prediction
 –
Lj0g3v0332249.1
n.a. PREDICTED: cation/H(+) antiporter 4-like [Cicer arietinum] gi|502135103|ref|XP_004502222.1| chr0 173806897 173809724 +
1 domain prediction
 –
Lj0g3v0332259.1
n.a. PREDICTED: cation/H(+) antiporter 4-like [Cicer arietinum] gi|502135103|ref|XP_004502222.1| chr0 173817971 173820798 +
1 domain prediction
 –
Lj0g3v0336759.1
n.a. Cation proton exchanger [Medicago truncatula] gi|357461451|ref|XP_003601007.1| chr0 176392347 176392765 -
1 domain prediction
 –
Lj0g3v0336769.1
n.a. Cation proton exchanger [Medicago truncatula] gi|357461451|ref|XP_003601007.1| chr0 176394279 176394777 -
1 domain prediction
 –
Lj0g3v0353959.1
n.a. PREDICTED: cation/H(+) antiporter 15-like [Cicer arietinum] gi|502161119|ref|XP_004512035.1| chr0 186386439 186388079 +
1 domain prediction
 –
Lj1g3v1318280.1
n.a. Cation proton exchanger [Medicago truncatula] gi|357519983|ref|XP_003630280.1| chr1 16000264 16004013 +
1 domain prediction
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Lj1g3v1330390.1
n.a. PREDICTED: cation/H(+) antiporter 15-like [Glycine max] gi|356507460|ref|XP_003522484.1| chr1 16045574 16047471 -
1 domain prediction
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Lj1g3v3975470.1
n.a. K(+)/H(+) antiporter [Medicago truncatula] gi|357508701|ref|XP_003624639.1| chr1 46844119 46849648 -
1 domain prediction
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Lj1g3v4551150.1
n.a. K(+)/H(+) antiporter [Medicago truncatula] gi|357510413|ref|XP_003625495.1| chr1 53698957 53704658 +
1 domain prediction
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Lj1g3v4551230.1
n.a. K(+)/H(+) antiporter [Medicago truncatula] gi|357510417|ref|XP_003625497.1| chr1 53734622 53738678 +
1 domain prediction
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Lj2g3v2086510.1
n.a. PREDICTED: LOW QUALITY PROTEIN: cation/H(+) antiporter 18-like [Cicer arietinum] gi|502159810|ref|XP_004511538.1| chr2 31267725 31272476 -
1 domain prediction
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Lj2g3v2365720.1
n.a. Cation proton exchanger [Medicago truncatula] gi|357491307|ref|XP_003615941.1| chr2 33922732 33923073 -
1 domain prediction
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Lj3g3v0463490.1
n.a. PREDICTED: cation/H(+) antiporter 1-like [Glycine max] gi|356542407|ref|XP_003539658.1| chr3 5281435 5283630 +
1 domain prediction
 –
Lj3g3v0826160.1
n.a. PREDICTED: cation/H(+) antiporter 28-like [Glycine max] gi|356537296|ref|XP_003537165.1| chr3 10478072 10481895 -
1 domain prediction
 –
Lj3g3v3639530.1
n.a. K(+)/H(+) antiporter [Medicago truncatula] gi|357474323|ref|XP_003607446.1| chr3 44149892 44150813 +
1 domain prediction
 –
Lj3g3v3639540.1
n.a. K(+)/H(+) antiporter [Medicago truncatula] gi|357474323|ref|XP_003607446.1| chr3 44150887 44151973 +
1 domain prediction
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Lj3g3v3690030.1
n.a. PREDICTED: cation/H(+) antiporter 28-like [Glycine max] gi|356544289|ref|XP_003540586.1| chr3 44847955 44848293 +
1 domain prediction
 –
Lj3g3v3690040.1
n.a. PREDICTED: cation/H(+) antiporter 28-like [Cicer arietinum] gi|502146137|ref|XP_004506320.1| chr3 44850122 44851366 +
1 domain prediction
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Lj4g3v2215610.1
n.a. PREDICTED: cation/H(+) antiporter 19-like [Cicer arietinum] gi|502150659|ref|XP_004508061.1| chr4 30809026 30814568 -
1 domain prediction
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Lj5g3v0941960.1
n.a. PREDICTED: cation/H(+) antiporter 15-like [Glycine max] gi|356527917|ref|XP_003532552.1| chr5 14293309 14295612 +
1 domain prediction
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Lj6g3v0522770.1
n.a. PREDICTED: cation/H(+) antiporter 15-like [Cicer arietinum] gi|502130207|ref|XP_004500568.1| chr6 5144260 5147942 +
1 domain prediction
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Lj6g3v1093690.1
n.a. PREDICTED: cation/H(+) antiporter 15-like [Glycine max] gi|356504020|ref|XP_003520797.1| chr6 13469174 13471037 -
1 domain prediction
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LotjaGi1g1v0318700.2
n.a. Phosphatidylinositol 4-kinase, putative; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|K7KLG8|K7KLG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318700 LjG1.1_chr1 76773262 76782719 +
1 domain prediction
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LotjaGi1g1v0318700.5
n.a. Phosphatidylinositol 4-kinase, putative; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|K7KLG8|K7KLG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318700 LjG1.1_chr1 76773262 76784049 +
1 domain prediction
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LotjaGi1g1v0318700.7
n.a. Phosphatidylinositol 4-kinase, putative; TAIR: AT5G64070.1 phosphatidylinositol 4-OH kinase beta1; Swiss-Prot: sp|Q9FMJ0|P4KB1_ARATH Phosphatidylinositol 4-kinase beta 1; TrEMBL-Plants: tr|K7KLG8|K7KLG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318700 LjG1.1_chr1 76773262 76784755 +
1 domain prediction
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LotjaGi1g1v0320500.1
n.a. Cation/H(+) antiporter; TAIR: AT2G13620.1 cation/hydrogen exchanger 15; Swiss-Prot: sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15; TrEMBL-Plants: tr|I1JY13|I1JY13_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0320500 LjG1.1_chr1 77080696 77085285 -
1 domain prediction
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LotjaGi1g1v0644100_LC.1
n.a. Cation/H(+) antiporter; TAIR: AT2G13620.1 cation/hydrogen exchanger 15; Swiss-Prot: sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15; TrEMBL-Plants: tr|Q2HVN4|Q2HVN4_MEDTR Cation/H+ exchanger 3; Found in the gene: LotjaGi1g1v0644100_LC LjG1.1_chr1 120141591 120143652 -
1 domain prediction
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LotjaGi1g1v0699300.1
n.a. Cation/H(+) antiporter; TAIR: AT3G53720.1 cation/H+ exchanger 20; Swiss-Prot: sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20; TrEMBL-Plants: tr|G7KZN0|G7KZN0_MEDTR Cation/H+ exchanger 3; Found in the gene: LotjaGi1g1v0699300 LjG1.1_chr1 126720420 126729346 -
1 domain prediction
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LotjaGi1g1v0699600.1
n.a. Cation/H(+) antiporter; TAIR: AT3G53720.1 cation/H+ exchanger 20; Swiss-Prot: sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20; TrEMBL-Plants: tr|Q2HVU7|Q2HVU7_MEDTR Cation/H+ exchanger 3; Found in the gene: LotjaGi1g1v0699600 LjG1.1_chr1 126757522 126764450 -
1 domain prediction
 –
LotjaGi1g1v0740800.1
n.a. Cation/H(+) antiporter; TAIR: AT2G13620.1 cation/hydrogen exchanger 15; Swiss-Prot: sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15; TrEMBL-Plants: tr|A0A0B2NY16|A0A0B2NY16_GLYSO Cation/H(+) antiporter 15; Found in the gene: LotjaGi1g1v0740800 LjG1.1_chr1 131475218 131478650 -
1 domain prediction
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LotjaGi1g1v0741500.1
n.a. Cation/H(+) antiporter; TAIR: AT2G13620.1 cation/hydrogen exchanger 15; Swiss-Prot: sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15; TrEMBL-Plants: tr|A0A151TW09|A0A151TW09_CAJCA K(+)/H(+) antiporter 13; Found in the gene: LotjaGi1g1v0741500 LjG1.1_chr1 131531798 131534765 +
1 domain prediction
 –
LotjaGi2g1v0437600.1
n.a. Cation/H(+) antiporter; TAIR: AT5G41610.1 cation/H+ exchanger 18; Swiss-Prot: sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18; TrEMBL-Plants: tr|A0A151R5E7|A0A151R5E7_CAJCA K(+)/H(+) antiporter 13; Found in the gene: LotjaGi2g1v0437600 LjG1.1_chr2 93419822 93423893 -
1 domain prediction
 –
LotjaGi2g1v0437600.2
n.a. Cation/H(+) antiporter; TAIR: AT5G41610.1 cation/H+ exchanger 18; Swiss-Prot: sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18; TrEMBL-Plants: tr|A0A151R5E7|A0A151R5E7_CAJCA K(+)/H(+) antiporter 13; Found in the gene: LotjaGi2g1v0437600 LjG1.1_chr2 93419860 93423875 -
1 domain prediction
 –
LotjaGi3g1v0055800.1
n.a. Cation/H(+) antiporter; TAIR: AT1G16380.1 Cation/hydrogen exchanger family protein; Swiss-Prot: sp|Q9SA37|CHX1_ARATH Cation/H(+) antiporter 1; TrEMBL-Plants: tr|I1LVH1|I1LVH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055800 LjG1.1_chr3 5864260 5867414 +
1 domain prediction
 –
LotjaGi3g1v0055800.2
n.a. Cation/H(+) antiporter; TAIR: AT1G16380.1 Cation/hydrogen exchanger family protein; Swiss-Prot: sp|Q9SA37|CHX1_ARATH Cation/H(+) antiporter 1; TrEMBL-Plants: tr|I1LVH1|I1LVH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055800 LjG1.1_chr3 5864430 5867197 +
1 domain prediction
 –
LotjaGi3g1v0055800.3
n.a. Cation/H(+) antiporter; TAIR: AT1G16380.1 Cation/hydrogen exchanger family protein; Swiss-Prot: sp|Q9SA37|CHX1_ARATH Cation/H(+) antiporter 1; TrEMBL-Plants: tr|A0A0B2QCT0|A0A0B2QCT0_GLYSO Cation/H(+) antiporter 1; Found in the gene: LotjaGi3g1v0055800 LjG1.1_chr3 5864430 5867197 +
1 domain prediction
 –