Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0111800 |
| Transcript ID | LotjaGi3g1v0111800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent ARF-type GTPase activating family protein; TAIR: AT3G07940.1 Calcium-dependent ARF-type GTPase activating protein family; Swiss-Prot: sp|Q8L7A4|AGD11_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD11; TrEMBL-Plants: tr|K7LQK9|K7LQK9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0111800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13788344..13795804) extracted from Lotus japonicus Gifu genome v1.2.
CTGGAAAATTCTATTTATGGCTTATAGATGAGACATTGATGATACCAATGTGTGTTTGTTAAATACTTGTCAATTTGTCA CGTACAAGACTTAACACGCCCATGGAATTGTAAGCGCGTTCAATTATTTCTCTCTGAACATCAAATCGAATGTTCCTTGG TGAGTCAAACAACATTCATCCCATCATAACAAAGATTATCTTCAATCAATCTCATTAATCTTTAATTTTCTCACATTGAC TTTTCATACCCAACAATTCCATTTCTTTAATATCAATTTTTTTAATAAAAAACTATTCAATTTGTCAAGAACACTGATTC TAACAATAAAATTCATGTTTTTTTTCTTCTTTTTCCTGAATCTCTGTCTTGTTTTGTTTAGGGGGTTTTCAATTCAATTT TCCCAGTTTCAGATTTTTTCATCTTCAATTCAAGGGGTTTCAAACACCAATTTCCTTAAAGATTCATTGAAAATCTTTAG CTTTCCTACCTCATTGTATGCTGCTTCAATGATTCACAAAACCCATTAATTAATTTCCTTGATTTGGTGTTTAATTTTTG ACAATCTTTTGGTTTGTTGCAGAGAATAAGCTGCCATTGACTCATGCCAATGTTTAAGGGGAGAAAAGATACCATCTAAT CTGTAAGATTTTCTTAAAAAAAGTTTTTTCCCCTTCTATTATAGCTGTGTTAATTAAACCAATTGGCCATAGTTTATGTT TATTCATTCTTAGTTGCATTGTGGCTCTCACATTTCAGCCTAATGATAATCCCAATAGTGTATGTTTCTTCATTTTGAGT TGTATTGTGGCTTTTCTCGTTGCGACCTCTTGTGCATTGTTTATGTTTCTTCACGTTGAATCGTATTTTCCATTTGAAAT ATGATCAGAATGAATGTGTGAAGTGCCTTTATATCTCCATGCAGAGAAGCAGTTGACAAATTTATGGCTGTTCTGAGATT GTAGTGCCCTTACTCGATTTGGTTTCTATTATTGGAAACTGGAGATGTCTATACATCAGGAAAATTCTGATATCAATGGT GTATCAGGTAAATTTTTTTATCCATTTAGTCGCCTTCTTCTTCTTCCCCTGTCCCCTCCTTTATTTTGGTTAAGCATTCA TATGACAGATCACCCATAGGTGAGAAGCGATAATGCAAAATCCTTTCTCTCAAGTAACTGGAAAATCATGATAAGTACTT TTGAATTTTTTAATAATTATGAATGCTACTACCAGAGGTGTAGTTAATTCCCTATAGAATATATAGTTAAATGTTTGTTT GTCATGAATTCTGGTAGAATTTTTTCATTTTTATGATTTTTTGAGGGTGTATCAACTTTAGATATTGTGGCTTGCACCAT GTGGTATGACTAATGCAGAATCAGTGATGAGTTATATCATCATTGACTTCATTTAAGTAAAATAGAAGTATTTCCTAAGT TTTTTTTGTTGAAAGGCAAGTATTTTCTAAATTTAACTTACTAGTTCCTAACTATACAGTGAAATGTCTCAGCTGCAGGG CCAGGATCTTGCCTTTATGATCTCTTCTGCTCTGAAACACCAAGTTTGAATTCTCAAAGTCGAAAGGAGGAATGGATATT TTCTGGTAATTTACCCTTTGTATAGTATTGGTTTTGTTATCTATGCTTTATTTTGGTTTGTGAAGTGTATAGGCGCATTT TTTATTCTAAAATCAAGGATTAGCCATAGGGGGCGTTTCCTATTAAATACCTGGACATTAGACTTGATATTCTTAATGAA CTTCCAATTTTACCTTCTTGCTAATTTCTTTTTAGTATGTGTAATTCTAAAAAAGATCAACCGTGTGTTTTATGTTAATA TCTTACACTGTAGACGCGCCAGATCTCAACTTGGTTATTGTCCTTTCAAAAAGAAACTTTATCTCACATGGCTTTACATG ATTAGTTTGATCTTAACAATTAATTATATTTCCTCATACTTTCAATTATTAGGACCACAGCAAAGGCTAGACAATCTGAT GCGTCAAGCTGGGAACAGGTATTGCGCTGATTGTGGATCATTAGAGCCAAAATGGGTGTAAGTATCATCAGCTTGGTTCT TAAAGGAATTTAGCCTACATGCATTTCTCACTGACCCTGTTGTTTAAATAACATGATCACAATCCACGTACTAGATGTTG TTGCTGTATCTTTCTGGAAAAATGTTTTCATTCATTCTCTAAGTTGACTGACGAGAAAAATATTCCTTTTGAAGACATGA AATATGATATTAAAAGTTCATTGACACGTTAGTTTTATCAGAGAATCATTGGTTCATATTTTTCTTTTAATTGTATTTGA TTTTATTTACTGCATTTCTTTGATATCAGATCTTCAAGTCATGGAGTATTTATCTGCATCAAGTGCTCTGGTATACATAG AAGCCTAGGAGTCCATATATCGAAGGTATGTTCCTAAATCCTAACATAACATGTAAGAAACTAGTTTTTTGACAGCTTAC AACGATCATCTACCTTTCCAAGGATGTATTTCTTCTTGGACATAAAAGAAGAGGGTTGGGAGTGTTACAATAAATTATGA GAAAATTACTTCTCTGATATCTCAGCTATCTGGAAACATTTATCCTAGGGTAGACTATGTTCACAATTTATAATCTCAGC TAAAGGTTGTTTTTAAATTAAAAAAATACTTCATCCTTTATAGTGAACTATTTCTGAAGTTTTATTACATTATATACAAC AATTCACACACTTTTCTGTACATTCCCTGCTTTCTTTGTTATCCATCCTTCTCTTCTGTCAACTTACTCCGTGCGTGTTT GGAACAACATTGGCATATTGATTTTGGTAAAAAACTAAAATGAGTTAAAGTGAGGTGAAAGTGAAGGGATTTATGTTTGG ATAATTTTACGGGAAGTGATTTGTTTAGCTGTATAGGGTAATTTTGTGAAATCCAGTTATGAAATCCAACAATTGGTTAT GTCCACCGCAGAAGCTACTCTCTGTAGCTTCTCTGAAGAATTTATTTTGGGACCACAAATCAACTCTCTAAGTTAATTGT CAAACATCTATATAACCACCTAAAAGTAATTCTAGTCAATGAGAATTGATTCTAAGGCTCCCAAACATACACTTCATGTT AAATTGTATGAAAGTGATCCCATCATTGATCACTAACCACTGTGACTGAGAATAGTTATCTGATGAAATTCTTTGTAAAT AGAACAGTTGTTGTAAACCAAAATTTAAATTACTTTTAGTGAAGGCCATGCAAAAGAAGATATGATTCCATGTAGTTGAT GGACATTTTATGTTTTAACTATCATGGGAGAAATACTAAATGATAAATAACCTTCGTTAGTGTAGAAGGGGAAGTTATTG TGAAGACTAAAAATCTCTTTGACAACTTTGTATTCAAATTTAGCACCTAGTCATTGCTATTTAAGCAATCCTAACATGTT CAGTATTCACGATTTGGCGGGAGGGGAGTATTCTCTGCCTCTTGTTCAGGCCCACCCTTTCATATGCTTACACACAATTA GTTGCATATTTTCAAGTGGAAAATCTAACATTATGTGATATTATTTTAGGTTCTATCACTGAAGCTAGATGAATGGACAG ATGAACAAGTTGATGCATTAGTGAAGATGGGTGGAAATACAGTGATCAATAAGAAGTATGAAGCTTGCATGCCAAGTAAC ATAAAAAAACCAAATCCACATTCCACCATTGAGGAGCGCTCTGATTATATTAGGTAACTGAAAAAAAAGAAGCATGCATA CATACAACCATATCATATTTCTGTTAAGGAAGTACTCCATCGTGATTCGCAGATGTAATTTTATGATTCAGGAGAAAATA TGAGCTGCTACAGTTTTTGGATACCGAGGAGAATTTGTGCTGTCCCTTTGTACCAACTCATGGAAGAACTTCATCCTCGT GCAGCAGTTCCTCCTCACAATACAAAAAACAATATGATAAACAACAAACTAAAAGTCGTATTGGTTTATCATTTCGAAAC AGCTGGGGAAGAAAAGATTCTGAGAATAAAAGTACAAAGAAGAGCAACTCGTTGGTAATGTTTTATTTCATTATTGGTAG CTCTGTCATTCATCTGTTGAATAAACTTTGAAGTCAGTTAATTCAACACATTATGCTTTGCAATATGGAATATTTGTATT CTACTTTGAATTCTTTTTATGTTTGTGTATGTGATATTATTACACAATGTATTCTACTTAGATTTTGTTGCATTGACATT CTGTTACTTCTTTTTCCATATGTGTTTTTTTACTTCAAAGCCTTACTAATAATAAGCATCTTGGGTATTGCACCATTCAT CTAATCTGAAGCATGCTATTTTTTCACCTTATTCTGAATAGAATATGACTGAAAATGATGCGTAGTGAACTATTAACTTT ATTTTTTTCCTTGAATACTGAATCCTGTTTCTCCCTATTTACTGTTATAGGCAGGTATGATTGAATTTGTTGGATTGATA AAGGTTAATGTGGTCAAAGGCACAAACCTGGCTATCCGGGATGTAATGACTAGTGACCCTTATGTCATCCTCTCTCTGGG TCACCAAGTGAGTTTCCTCATCTCTCAACTACTTGGCATTATACATGTAAAGGAGAACATTAACATGAACAATGTAACAT CTTTAATATCTGTTCTTACAGTCGATGAAGACACGTGTCATAAAGAGCAATTTAAATCCAGTTTGGAATGAAAGCCTGAT GCTGTCAATTCCCGATAGCGTTCCTCCTCTTAAAGTGGTAAGTCCAATTGATTAGGATTGTGAGTAATCATAAGAGGAAA GACAAAAAGATGAAATTGGTCTTTGGATAAGTCCTCCTCTTATAGCTGACCTCTTTAAGTGGGATAAGGCTTTTGTTGTT GTTGTTGTTGTTGTTTCTGTTGTTGTTGTTGTAATCTTGTCTTAGAATTTATTTAGATTTTCATCAATGACAGTCTCAGC AAAAAAAAGAAAGTGAGAGAATGCAAATGCGGAGTATGAGAGGAGGTGACAATAAGCAACAATCACAAAACAAATTGATA CATATTTAAATATATAATCTTAATGCTGCAATTGGTGAAATGATATAACAAATAAGTGAATAAGTAAATGATTTTGTTAT TAGGAAATCATAATATAAAACAATTACATATTTAGTATGAAGAAATTCTTCAAATATAAAAGTTACTAAGGTCATCATCT ATATAACATCTAAAATTGTGACAGTTTGTGCACCACACCTACAATCATCAACATTACTGGAAGATGAAAACCTCATCAAA TCATGGTTCCTCATTCGTCTAAAAAAGTTATGAGAGTTGAATAAATTTTTTGAATATTTATATTAGTTTAAGCTCAACTA GGAAGTCAGTAATTGAACTGTGGGCTATTTGCTTATATGGAAAAATAATACAGATTCAAGTTGTTTAAATGACACAATCC GTGCTTCATATTTACTGTAAGATAAATGGATTTAAGGGGTTGCAAATTGAAAAAAAAAAAGTGTACGGTCTCCACCCTCT CTGGCTTGAATTTCATATTTTGGGAATCAAATGACACAATATGCACATTAAGTTCATACAAGAAACCATGATCCTGTGTT CTCAGCGCTTCACGATACATAGTTCATGTAACTGTGCTCCTTCTATTACAATATATTTTACTATCTCTTATTCTTATGCT TCATGTTGCATTCTTTTTATCTTCTTTGCCCTACCTATATCTACAGTTTATATTAAAGAAAATGTTAACTAAAGATTTCT TTATACTATTAACTTTCATTTCATTTTGACATTCTTAAATTGTTATCAATAACTTGAGTGTTGCAAAACAGCTTCCTCTT TCTCTCTTCTTATAAATCCCATTTTCCCTCCTAATCTGCTCAACTAGTGTGAAGTGTCTTTTATGTGTACATTTAACTTA TTTAGATTCCATCATCCAAACTTTTCTATTCATTGCTTCATTGCTACATTTGTATCAGAAACCACTCCTTTAAGTTCTGT CATTGATAATATAGCTCTTATTCAAATTTTCTCTTCCATTCCTGTTTGATCAGATTTGATATGATGCTTATATGCAGCTT GTGTACGACAAGGACACTTTCTCAACTGATGATTTCATGGGTGAGGCTGAAATAGATATTCAACCTCTAGTCGCAGCTGC AAAGGCATATGAGAAATCATCGATCAACGAGTCGATGCAGCTTGGGAAATGGGTAGCGAGTGGTGACAACAATCTTGTGA AAGATGGAATCATCACCCTTGAGGATGGGAAGGTCAGACAGGACATCTCAGTGAGGCTACAGAGAGTTGAGAGAGGTGTG CTGGAGATTGAGCTTGAATGTGTTCCTCTTACTCAGTAGCTGAGATAGAAGTTCATAACTTAGCAGAATACAGTTTGGAG CATATATCAGTGTAGATTGTCTTGTCTCAGTTTCCCTTTGTATATTATCCTGTGAGACTGTGACCATCCTTCTGTAGATG AACAAATATGATTTATCAGTAAGTGTTTTCGGAAGAGACTTTATTGATAAATTTCAACCTTTTTGCCTTTTTGTTAAAGC TCATGCTCATGTTGGTAGAATTTATTTAAAAAGAAAAAGGAGCAGGATCCTATTTCCACTAACCAAGTTTAGGTTAATAT TCTCTCTTGAATCTTTATAGTCTTTTAGGTTTGTTATCTATAAACTTAATATATGGTAGGGTATTATGAATTTATGACAG ATTAATTCATATAATCAAACTACACTTAGTAGAAAAATAACAGGTCTTGAGGATGGTGATATTATCATATTTATTTCATT ATTTTCAGAAAAGAAAAGAGCAACGATACTGATTAAGAAGCATCATGGCACGAGATACACATGAAATGATCAATCTGGAG GACCAAATTGACTGCCGGTCGTACACCAAGAAGAGTGTGTCCCAATAACAGAGCACGCCGCGATGACCCTGCCTTAATGA TAACCCTGCCACCAAGGCAAGCCGATGATCAAAGGAGAACCCCAAACAATAGCAGGTTGGTGGCCGGGTCCTTCGCAGGC GGCAGAGTCTCGGCAAATACTTGGAAAAAGCACCTTAAGTCACTACTATTGCATGTTGCCGACCATCATCCGTTGATAAA CTTGCTGTATCCCCGAAAAAGACGTAGATGATCGCATTCACATACAACAGATATGGCGCTGAAAGTGGTAACAATGATGA TCATGTGGTCATTGAAGCTTCCATACAGAAAGGTGAAAAGAGTTTTCATCGATTAGGGGAGCTCCGCTGACATACTATTT TTTGTGCATTCAAGTCGTTGCGGTTCTTCGACAAAGAACTCATCCCTTATGATAATTGTCGTAACCAGGGTCACGACATG TCGATGAAAAAAATCAATGAAATATAACAATAAATAAATAGTATGGGATTTACAAATGAAAACACCAAAAAATACTTTGG GTATTTAGAACCTGATTTTGT
CDS sequence (LotjaGi3g1v0111800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTATACATCAGGAAAATTCTGATATCAATGGTGTATCAGCTGCAGGGCCAGGATCTTGCCTTTATGATCTCTTCTG CTCTGAAACACCAAGTTTGAATTCTCAAAGTCGAAAGGAGGAATGGATATTTTCTGGACCACAGCAAAGGCTAGACAATC TGATGCGTCAAGCTGGGAACAGGTATTGCGCTGATTGTGGATCATTAGAGCCAAAATGGGTATCTTCAAGTCATGGAGTA TTTATCTGCATCAAGTGCTCTGGTATACATAGAAGCCTAGGAGTCCATATATCGAAGGTTCTATCACTGAAGCTAGATGA ATGGACAGATGAACAAGTTGATGCATTAGTGAAGATGGGTGGAAATACAGTGATCAATAAGAAGTATGAAGCTTGCATGC CAAGTAACATAAAAAAACCAAATCCACATTCCACCATTGAGGAGCGCTCTGATTATATTAGGAGAAAATATGAGCTGCTA CAGTTTTTGGATACCGAGGAGAATTTGTGCTGTCCCTTTGTACCAACTCATGGAAGAACTTCATCCTCGTGCAGCAGTTC CTCCTCACAATACAAAAAACAATATGATAAACAACAAACTAAAAGTCGTATTGGTTTATCATTTCGAAACAGCTGGGGAA GAAAAGATTCTGAGAATAAAAGTACAAAGAAGAGCAACTCGTTGGCAGGTATGATTGAATTTGTTGGATTGATAAAGGTT AATGTGGTCAAAGGCACAAACCTGGCTATCCGGGATGTAATGACTAGTGACCCTTATGTCATCCTCTCTCTGGGTCACCA ATCGATGAAGACACGTGTCATAAAGAGCAATTTAAATCCAGTTTGGAATGAAAGCCTGATGCTGTCAATTCCCGATAGCG TTCCTCCTCTTAAAGTGCTTGTGTACGACAAGGACACTTTCTCAACTGATGATTTCATGGGTGAGGCTGAAATAGATATT CAACCTCTAGTCGCAGCTGCAAAGGCATATGAGAAATCATCGATCAACGAGTCGATGCAGCTTGGGAAATGGGTAGCGAG TGGTGACAACAATCTTGTGAAAGATGGAATCATCACCCTTGAGGATGGGAAGGTCAGACAGGACATCTCAGTGAGGCTAC AGAGAGTTGAGAGAGGTGTGCTGGAGATTGAGCTTGAATGTGTTCCTCTTACTCAGTAG
Protein sequence (LotjaGi3g1v0111800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIHQENSDINGVSAAGPGSCLYDLFCSETPSLNSQSRKEEWIFSGPQQRLDNLMRQAGNRYCADCGSLEPKWVSSSHGV FICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALVKMGGNTVINKKYEACMPSNIKKPNPHSTIEERSDYIRRKYELL QFLDTEENLCCPFVPTHGRTSSSCSSSSSQYKKQYDKQQTKSRIGLSFRNSWGRKDSENKSTKKSNSLAGMIEFVGLIKV NVVKGTNLAIRDVMTSDPYVILSLGHQSMKTRVIKSNLNPVWNESLMLSIPDSVPPLKVLVYDKDTFSTDDFMGEAEIDI QPLVAAAKAYEKSSINESMQLGKWVASGDNNLVKDGIITLEDGKVRQDISVRLQRVERGVLEIELECVPLTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 392 | 392 | 3.7E-200 | – | |
| PANTHER | 1 | 392 | 392 | 3.7E-200 | – | |
| Gene3D | 30 | 170 | 141 | 5.9E-45 | ||
| ProSiteProfiles | 48 | 170 | 123 | 25.444 | ||
| SUPERFAMILY | 49 | 163 | 115 | 1.44E-39 | ||
| SMART | 49 | 170 | 122 | 7.9E-38 | ||
| Pfam | 49 | 164 | 116 | 3.2E-36 | ||
| CDD | 51 | 157 | 107 | 5.2982E-57 | – | |
| PRINTS | 60 | 79 | 20 | 2.2E-19 | ||
| PRINTS | 79 | 96 | 18 | 2.2E-19 | ||
| PRINTS | 100 | 121 | 22 | 2.2E-19 | ||
| MobiDBLite | 178 | 202 | 25 | - | – | |
| Gene3D | 234 | 389 | 156 | 1.2E-28 | ||
| CDD | 235 | 379 | 145 | 3.48793E-81 | – | |
| SUPERFAMILY | 235 | 327 | 93 | 6.55E-28 | – | |
| Pfam | 237 | 325 | 89 | 5.5E-24 | ||
| SMART | 237 | 332 | 96 | 5.6E-20 | ||
| ProSiteProfiles | 238 | 317 | 80 | 16.524 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
Expression pattern of LotjaGi3g1v0111800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…