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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0188900 |
| Transcript ID | LotjaGi3g1v0188900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aconitate hydratase; TAIR: AT2G05710.1 aconitase 3; Swiss-Prot: sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic; TrEMBL-Plants: tr|G7ITZ5|G7ITZ5_MEDTR Aconitate hydratase; Found in the gene: LotjaGi3g1v0188900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:27125940..27134445) extracted from Lotus japonicus Gifu genome v1.2.
GAATAATTCCGGTGTATTTTTTTCACTCATTAGCAATAGAAACATCGAGGCAGCAACCCAGCCCAAAAAAGCTACGCAAT TCAATTCACTGTTGTTCTCTTCTAGAACTACAACCAGCCCTCGCTCTCTTTTCACATTCGTTCGTTCTCCACACGCCCCT TTCAAAAACCGTTACACGCTCGCTCTCATATGCTGCATGCTTGAATCGATTTACCATGGCTTCCTCAGCCTCTTCTCTCC TCAGGTCATCTCGCTCCAAGCTCTTCCCTCCTTCCTCCCTTTCTAGAATCTTCCCCTCTCGCTCTTCCCCCCACCGATCC CCCGCCTTCTCCACCGCCGCGCGCTCCGCCGTCCACCGGTGGAGCCACGGTGCCCTATGGAGGTCTCCTTCCACCCTCCG CCCTCAGATCAGAGCCTTCGTTCCCCTCATCGAACGCTTCCACCGCAGCATCGCCACTTCCGGTACTTCACTCCCTCAAT TTCGGAGCTCTTTTTTCTGTAGTGTTGTTTTCATTTGATCTAACACCTGTGATTTTATCGTTGAATGTGAATTCTGTTTT GCTTTTTTGTTTTCTTGGAATGGAATCTTCTGTTTGACTATGAGTGAATGATTAGTACGTTAACTTTTTGCGTTTAACCT TGCTTTCTGTTTTCTGTTGAATATCGTGATTGTTTGAAGGATCGTGAAGTTTGCCTTATCTGTTGAATCGTCGTTGTTTG AATTTGTAATATGTTGGTGCTGAATTTTTGTGTGTTTCTGAGTGTTGTTTTTGTCATCTAACATATTTGCAATTGCTGCA GCTGGTGAAAATCCTTTCAAAGGAAACTTGACGAGTCTCCCCAAGCCGGGTGGCGGCGAGTTTGGAAAATTCTACAGCCT TCCTTCTCTCAACGACCCACGAATTGGTAATTTGCTGGTTCCATTTTAGTTCAGTGGTTCGGTTTGAATTGGGTTTTCTT TTTGTTGTCTTTATTACTAGAATTTTGGGTGAAATGTGTGTTTTTGTCCCTTTATCATGTGTTTGATAAAGGGATCAGTC TCTCCTTCAGAATTGCACATTCTCCTTGCATTTGCTTAAGTAGGTAAGTTGCTGATGGTATCAACTTTTGTTGGTATATG ACAGATAGGTTGCCATATTCTATCAGAATTCTCCTTGAATCTGCGATTCGTAATTGTGACAATTTCCAAGTTACCAAAGA AGATGTTGAGAAGATTATTGACTGGGAAAGCTCTTTTGTGAAGCAAGTTGAGATTCCTTTCAAGCCCGCTCGTGTACTCC TGCAGGTACTTTATTCAATTCTAGGTGCAGCGAAAGAGTTATTATCATGGATGGGTGATGTTAAGTAGTAATACACATTC CTTCATTTAACACCTATCCTTTTTTTTCCTTCCCTCAGGATTTCACTGGAGTGCCAGCTGTTGTTGACCTGGCTTGCATG CGAGATGCGATGAATAAGCTTGGCAGTGATTCTAATAAGATTAATCCTCTGGTATACACAATTTCATCACTTGTGATTTT AATTATGTTTTAAAAGTTCTCAGATTCATAGGAGACAAGCAGGGTTGTACATGGTATTAGATTATGCTTAATATGTTTAC AACTTGGTTTGATTTTAAACTTACTTTAAGGTCAAGTATTGTTGGCCGAGTTGATTTTGAAATTATATTTGTGAGAAAGA GAGACAATGTGAAACTCTTACTAATTAGATTGAAAATAACTGTTATTCTTTTTGAAAAAGTTTGAGATGTTTTTGAACCA TTTTGCACTCCAAGATGGATCATATTAAAAATATTCTTTTAAGTTTGAGCAATTACACACTACAAATTTAAACCATATAA TTTTTGTGAAATCACAACAACCTATCTCCACAGTACCCAGTCATGGTGTTACCGAGGAGTTAAACAAGCTCTTTTTAAAG CATATTTTGACTGTACTTTAGGCTTGCTATAGTATAAGTGGCTCTGAGTCTGAACATTGCTTGTTGCCAGGTTCCTGTTG ATCTCGTCATTGATCATTCAGTTCAAGTTGATGTGGCGAGGTCAGAGAATGCAGTGCAGGCTAATATGGAGCTTGAGTTC CAGAGAAACAAGGAGAGATTTGCTTTCCTAAAATGGGGTTCGACCGCGTTCCAAAACATGCTTGTTGTTCCTCCTGGTTC TGGTATAGTACATCAGGTAAGTTCAGAATCAGACATATAAAAAGATGTCATGGAGTATATTCTTCATTGTTTTTGGTTGT TGATACTGCTTATGATGTCTCGAATTCCAGGTCAATCTTGAATACCTCGGACGTGTTGTATTCAACACTGAGGGCGTACT CTATCCTGACAGTGTGGTTGGCACTGATTCACATACAACTATGATAGATGGACTTGGAGTTGCTGGATGGGGTGTTGGGG GTATTGAAGCAGAGGCAGCAATGCTTGGCCAGGTATGATTTAAATATAATAAAATGTTGATTATATAAAAGAAGTAATGA GCGGATGGTTTATTCTTTTAAGTTACATGTTTGTGTACTTTTTCTATTAACTTTGTTGATCCTAATTCTGTGTGCTATGG TAATGACAGCCTATGAGCATGGTGTTACCCGGTGTTGTTGGATTCAAGTTGTCTGGAAAATTGCGCAATGGTGTTACAGC AACCGACTTGGTTCTAACTGTTACACAAATACTTAGGAAACATGGTGTTGTAGGGAAATTTGTGGAGTTTTATGGTAGTT AAGTTCTCCTGCATCTCCTTATTTTCAGCTTGTGCTGCCCTGTTCCAAATAATGACCTGTTCGAATGGTTTTTGTTCTAT AGGTGATGGTATGCGCCGATTATCATTAGCTGACAGGGCCACTATTGCCAATATGGCTCCTGAATATGGAGCAACCATGG GCTTCTTCCCTGTAGATAATGTGACGCTACAATACCTCAAGTTAACGGGAAGAAGTGAAGAGACTGTGAGTATCACCTTA TTTATTATTTCCCAATGATGTAAAATGCCTATAGGATTAGCTAACCTTCATATTTGGCTGAACATAGGTGGAAATGATAG AAGCCTATCTCAGGGCAAACAAAATGTTTGTGGACTATAATGAGGTAATTCTAGTTGAATGTACATTCCTTTTAACAAAA CAAGTACGTACTAATGTTAGAGGTATATAATGCTAATTTGGTTTCCATAAATTCAGCCTCAACAAGAAAGAGTTTATTCA TCCTATCTTGAATTGGACCTTGATGAAGTTGAACCATGTATCTCAGGGCCAAAGAGGTAAGACAGTAAGAGACTTGCTTT ACATACTGCCTGGTATTTTAATGTGAGTATTTAAACTTCTCTTTTAAGTGACAATTCATACTAAATGATACCCTGGCCAG GCCTCATGATCGGGTGCCTTTGAAAGAAATGAAGACTGATTGGCATGCTTGTCTTGATAGCAAAGTGGGGTTTAAGGTTA GTAATGCTGTGATATTCAAATATTGTTCTATTTTTTGTCTCATGAAAAGATGATTTAATGGTTTATCTATATAGTGTATT AGCTCGCAACCATTTGTTCAAAGCAAAAATGCAACTGTCTGCCCATTTCGTTGTTTTGTGATAAACTACTGACTGGGTTA AATTTTGTCAATTTTCAATTGTGTGCCTACAACTACAACGAACATCTGAGATCGACATCACAGAACAAAGTTGAAATTGT AGCCTCAAAACACAAATTGTATTTTACTATGAAGAAAAGCAAATCAACTTGTTTAACCTTTTTTCAATAATCAAATGGTA ACACTGTGTCAAGGGGAAAAATTACCCTTCTGTTTCCTGAATCTGGAATCTAAAAAGTGATTATTTTACTGGAAATCAGT CCTATTTTTGGAAAAAAAATTCTATCTCTATCATCTGTCACTTTCTATGATCACAGTAGCCAGATTTCAGAGAGCATTAT AATAATTAGAATGCAATTAACTTCTTTTCTTAATATTAGTCATTCTGATTGTTTCAAGTTGCAGACCTTCAACTTGAAGG CGCAGTTGCAGTCACAAAACATGTAATAATAGTTATCCTACATGTTTTCTTTCAATACAGGGATTTGCAATACCGAAAGA AGCACAAGGAAAAGTTGCAAAGTTTGATTTTCATGGGCAGCCAGCAGAGCTCAAACATGGAAGCGTTGTGATTGCTGCAA TCACAAGCTGTACAAATACATCAAACCCAAGCGTTATGCTTGGGGCTGGTCTTGTTGCAAAGAAGGCTCATGAGTTAGGC CTGAAGGTTAGGCGTTGATATAAATATTTTAGAAACTGTCTTTCTGCTCATTTTCAACATGATATCTTTACTATGATACC ACATTTCGTGGCAACTGTAAAAAGGGCATTGTTTTCCTTTTATGTTGTCCTCTTCTAGGTAGTAATTGTTGAAATTCTCA CTGTTTGCCAGGTTAAGCCTTGGGTGAAAACAAGTCTTGCTCCAGGCTCTGGAGTTGTTACTAAATATCTGCTTCAGAGG TATTTCACACTTCTTATTATAATATTATATTATTCTTGTAATTGGTATTATAATGTAATTTCCCTCTACATTCTGCACAA TTTTGGAAAAATATATACCAAGTTAAAATTTGTTCTTTACTTTCTTTGCAGTGGCCTGCAAAAGTATCTAAGTGAACAGG GTTTCCAAATTGTTGGATTTGGTTGTACCACGTGCATTGGCAATTCAGGGGATTTGGACAAATCAGTTGCTTCTGCTATC TCAGAAAATGGTAATTGGAATATCCTAAAAAATATTATGTCTATAACTGTAGCTGATTTCTATGCAATTCTTACTTTTTC TTTTAACATTTAGATAACATCTTAATCATATTCTGCTTTAAATTACCTGTACTAATTAATTCTTATATGGTTTCATGCAG ACATTATAGCATCTGCTGTGTTATCTGGGAACCGGAATTTTGAGGGCCGTGTGCATGCTTTGACACGAGCTAACTATCTT GCCTCGCCTCCGCTGGTTGTTGCTTATGCGCTTGCTGGAACGGTATGTATGCTTTCTTAATATTTCTAATATATGTATGA AATGTTTTTGGTCCTTGCTTCTTCCATATTGTCCTATTTTCATGTCTCTTTTAAGACTAGTTCTAAGATTATTTATGCCA AGGACTTGGTAAAAAACAAGTATTGAAGTTATTGGAGGCTAATTACAAGCATTGATATTTTCTGTTAGTTACTTAATAAG ATATCCACCCTCTTTCATTTACATTTGTTCAGCCTCATGCTATATGTAATGTATTAGGACTCAAGCTGAGTGCCCGAGTC CAAATGCATTCTTTATTAGCTTTTTGGTTTTCCTTTTCTCAAATTCTCCTATCAAACACTTCCTTAGACCCGACTATTTA GATACTCACATCCAGAAGTCTGGATCTTGACTTACACTTGGCAATGACTTTGGTAGTTTTTCTGTTTTCTCTGACATTGA GTTTCATGTCACAATAATATTTAGGCATTTTCTCGTGTTTATAAGCTTTATTTAGAACCTTGTTTTATTGTTGTAGGCAT GCTTTATTTGATACTATATTAAGGTTGATCAAAATTTGGAGTTTATAATATTGATTTCCCTCCAAATGTTGTTAACATTC ATCACTCGCCTTTTGGTCAAATTTCCAGGTTGACATTGATTTTGAAAAGGAGCCAATAGGTACAGGGAAAGATGGCAAAA ATATCTACTTAAGAGATGTTTGGCCATCCACGGAAGAAATTGCACAGGTGAATGATGTCCACTGTTCTCATTATTTGAAA TTTACTCTGAAGATTTGAGTCGTTTGACATTGTGTGCAGCAAAATTAACTTTGGTTGTTTGATTCGTAGGCTGTCCAATC GAGTGTGTTGCCTGACATGTTCCAAAGTACATATGAAGCTATTACCAAGGGTAACGCTATGTGGAATCAACTACAAGTTC CTGCTGAGAAGCTGTACTCATGGGATCCCAACTCAACATATATTCATGAACCTCCGTACTTCAAGAACATGACCATGGAT CCTCCTGGCGCTCATGGTGTGAAAGATGCCTATTGCCTGCTAAATTTTGGTGACAGTATAACAACTGATCACATTTCTCC TGCTGGAAGCATTCATAAAGACAGCCCTGCTGCAAAATATCTTCTGCAGCGTGGGGTTGAACAGAAGGACTTCAACTCTT ATGGAAGTCGTCGTGGCAATGATGAAATTATGGCAAGGGGAACCTTTGCTAACATTCGTCTTGTAAACAAGCTCTTGAAC GGGGAAGTTGGCCCCAAGACTGTTCATATTCCCACAGGGGAAAAGCTTTCCGTGTTTGAAGCAGCAGAGGTGAGCTATGC ACTACCCAAGAATTACTTGTTTTTTATTACTGCTTTTGAACTTCTCAAGTGGCTGTCATATTATGCCATATCATCATATT TTGAAATGGTCTTTTCTTAATTGCTTTCTAAAATTTAACCTGACAATGTCTCATTGAAGAAGAAAACCTTGGTGAATTTC TTTATAATGCTTATTAGATTGTGATTGTGAATTCTTTTGCTTATGTGGATGTATCATCTATTGAGTCTTGCTTATTCAAA TAATGAACCCCAAATCACAACTTTTTGCTGCCATTGCATGGGTTATTGTTACGTGATGGCCTTGTGAACTTTACCTTTTG GTTTAGTGGGATCTCCTCCTTTGAGGACATGCTGAGGGTATGGTCATGGTTGTAAATCCACGTGGTTTTATGATGCATAA AGTGCAATTTTATTTTCTTTTTCCCTCTGTATGAAAGAACTGGTGGATACCTTTGTACCAGGGAATGTGATAAACAGTTA TTAATTTTAGCTCTGCTAAGTTTCTGATCCCCTGGATTTATTCTCCTATGTTAGAAATACAAGACTTCAGGACATGACAC CATTGTACTGGCTGGAGCTGAATATGGTAGTGGAAGTTCCAGAGATTGGGCTGCCAAGGGTCCCATGCTATTGGTGAGTC CCTCCATTTGTCATAGCCTGTAATTTGTCTTTCTATTTGGTTTTCTGAACTACTTGTGAGACTAATATTCCTGACATATT TGATGTTTACATTTTTTTGACAGGGAGTTAAAGCTGTGATAGCTAAAAGTTTTGAGAGAATTCATCGCAGTAATTTGGTA GGAATGGGTATCATTCCTCTTTGCTTCAAATCTGGTGAGGATGCTGACACATTGGGATTGACTGGCCATGAACGGTTTTC CATTGACCTTCCAAATAATATCAGTGAGATAAGGCCTGGCCAAGATGTCACTGTCAGAACCGATAGTGGAAAATCTTTCA CCTGCACAGTTCGCTTTGACACTGAGGTAATTTCTTAAGCTTGTCCTTCATTAATGTGTGTTTGTTTTGTTGATGCAATT TTATATCCAAATGTGGTCCATCACTCCCTCATAATTTAGTTTTTTGTTCGAGCTCAATGGCGTAGTGTGATCCATAGAGC CGACCACACTTGGTGGGATAAGACTTTTGTTGTCGTTTTTGTGGTCCATCACTGGGATCTGCTCGGTGTTGACTGTTGAA CCACATATTCAGCCTTTCCGAAAAACTTGTCTCTGATTCGCCGAACCTTATATTTTCAGGTGGAGCTGGAGTATTTTAAC CATGGAGGCATTCTTCCATATGTCATCAGGAATCTCACTAGGCAGTGAAGTCATTGTTGATGGGAAATATGAAATACTTC TGCCACTGCATGTGCACCTTTACCTTTCAAGTGGTAATAAAATGTGAGAAATTAAAATAAATTTCCTATAAGTAGGAAAG AATCCCTTAAAGGGAGGCGATTTTTTTTTACGCTTCCAGGTGTTTACATTAGGCCTGCAAGCAAGCATTGATTTTAGATT TCTTATTTGTGAGATCCGTGAGCCATTGAGCAGTGAAGACAATTGTATTTTGTATAAGCTGGTGTGATCCCTGCTTATGG CAGCTACATGAACTTGTAGCCTTTTCTGTTCTTGTGAAGTTCACTTCATTTTTGTTACCACTATAGTGAATTAATTTATA CTGTTTTTTATAGGTTAGAGTTTAGATATTCGCTCAGATTGAATTTGCTTGTAACAATGCTGTGTTGAAAAAAAAAATGC ATGGAATGATGTCAAAATCGGACGGAACCATTGATTATTTGTAACACATCAGTGTTTATTATTAATTTTCAAAAATGTTG TTGACCATTAAATGAATAGAAGTGCTAGTAATAAACTCTTCACACTTACTAATACACTATGATCGGATGAAGTTTATGTG AATCTCATTAAATTAATGAGTTTATTTGGTGGACCTTATTTAGGTTAAACTCATTAAACAGGTTAAGTTGAACATATTTG AGAACGCCGCGGACATTGCTTGCCCCGTTAATGTTAACCAACTGAGACATAGACCTCCCAAGGAACTCAAGGCTTTCCAT GTAGCACTCCACTGTTGAAACACACCAGACATGAATCTTTACTCATGAGACCCAAATCTATAAAAGTCAAATAGCAGCCA ACTAGCATCTCAGCATTGAAATCTAC
CDS sequence (LotjaGi3g1v0188900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCTCAGCCTCTTCTCTCCTCAGGTCATCTCGCTCCAAGCTCTTCCCTCCTTCCTCCCTTTCTAGAATCTTCCC CTCTCGCTCTTCCCCCCACCGATCCCCCGCCTTCTCCACCGCCGCGCGCTCCGCCGTCCACCGGTGGAGCCACGGTGCCC TATGGAGGTCTCCTTCCACCCTCCGCCCTCAGATCAGAGCCTTCGTTCCCCTCATCGAACGCTTCCACCGCAGCATCGCC ACTTCCGCTGGTGAAAATCCTTTCAAAGGAAACTTGACGAGTCTCCCCAAGCCGGGTGGCGGCGAGTTTGGAAAATTCTA CAGCCTTCCTTCTCTCAACGACCCACGAATTGATAGGTTGCCATATTCTATCAGAATTCTCCTTGAATCTGCGATTCGTA ATTGTGACAATTTCCAAGTTACCAAAGAAGATGTTGAGAAGATTATTGACTGGGAAAGCTCTTTTGTGAAGCAAGTTGAG ATTCCTTTCAAGCCCGCTCGTGTACTCCTGCAGGATTTCACTGGAGTGCCAGCTGTTGTTGACCTGGCTTGCATGCGAGA TGCGATGAATAAGCTTGGCAGTGATTCTAATAAGATTAATCCTCTGGTTCCTGTTGATCTCGTCATTGATCATTCAGTTC AAGTTGATGTGGCGAGGTCAGAGAATGCAGTGCAGGCTAATATGGAGCTTGAGTTCCAGAGAAACAAGGAGAGATTTGCT TTCCTAAAATGGGGTTCGACCGCGTTCCAAAACATGCTTGTTGTTCCTCCTGGTTCTGGTATAGTACATCAGGTCAATCT TGAATACCTCGGACGTGTTGTATTCAACACTGAGGGCGTACTCTATCCTGACAGTGTGGTTGGCACTGATTCACATACAA CTATGATAGATGGACTTGGAGTTGCTGGATGGGGTGTTGGGGGTATTGAAGCAGAGGCAGCAATGCTTGGCCAGCCTATG AGCATGGTGTTACCCGGTGTTGTTGGATTCAAGTTGTCTGGAAAATTGCGCAATGGTGTTACAGCAACCGACTTGGTTCT AACTGTTACACAAATACTTAGGAAACATGGTGTTGTAGGGAAATTTGTGGAGTTTTATGGTGATGGTATGCGCCGATTAT CATTAGCTGACAGGGCCACTATTGCCAATATGGCTCCTGAATATGGAGCAACCATGGGCTTCTTCCCTGTAGATAATGTG ACGCTACAATACCTCAAGTTAACGGGAAGAAGTGAAGAGACTGTGGAAATGATAGAAGCCTATCTCAGGGCAAACAAAAT GTTTGTGGACTATAATGAGCCTCAACAAGAAAGAGTTTATTCATCCTATCTTGAATTGGACCTTGATGAAGTTGAACCAT GTATCTCAGGGCCAAAGAGGCCTCATGATCGGGTGCCTTTGAAAGAAATGAAGACTGATTGGCATGCTTGTCTTGATAGC AAAGTGGGGTTTAAGGGATTTGCAATACCGAAAGAAGCACAAGGAAAAGTTGCAAAGTTTGATTTTCATGGGCAGCCAGC AGAGCTCAAACATGGAAGCGTTGTGATTGCTGCAATCACAAGCTGTACAAATACATCAAACCCAAGCGTTATGCTTGGGG CTGGTCTTGTTGCAAAGAAGGCTCATGAGTTAGGCCTGAAGGTTAAGCCTTGGGTGAAAACAAGTCTTGCTCCAGGCTCT GGAGTTGTTACTAAATATCTGCTTCAGAGTGGCCTGCAAAAGTATCTAAGTGAACAGGGTTTCCAAATTGTTGGATTTGG TTGTACCACGTGCATTGGCAATTCAGGGGATTTGGACAAATCAGTTGCTTCTGCTATCTCAGAAAATGACATTATAGCAT CTGCTGTGTTATCTGGGAACCGGAATTTTGAGGGCCGTGTGCATGCTTTGACACGAGCTAACTATCTTGCCTCGCCTCCG CTGGTTGTTGCTTATGCGCTTGCTGGAACGGTTGACATTGATTTTGAAAAGGAGCCAATAGGTACAGGGAAAGATGGCAA AAATATCTACTTAAGAGATGTTTGGCCATCCACGGAAGAAATTGCACAGGCTGTCCAATCGAGTGTGTTGCCTGACATGT TCCAAAGTACATATGAAGCTATTACCAAGGGTAACGCTATGTGGAATCAACTACAAGTTCCTGCTGAGAAGCTGTACTCA TGGGATCCCAACTCAACATATATTCATGAACCTCCGTACTTCAAGAACATGACCATGGATCCTCCTGGCGCTCATGGTGT GAAAGATGCCTATTGCCTGCTAAATTTTGGTGACAGTATAACAACTGATCACATTTCTCCTGCTGGAAGCATTCATAAAG ACAGCCCTGCTGCAAAATATCTTCTGCAGCGTGGGGTTGAACAGAAGGACTTCAACTCTTATGGAAGTCGTCGTGGCAAT GATGAAATTATGGCAAGGGGAACCTTTGCTAACATTCGTCTTGTAAACAAGCTCTTGAACGGGGAAGTTGGCCCCAAGAC TGTTCATATTCCCACAGGGGAAAAGCTTTCCGTGTTTGAAGCAGCAGAGAAATACAAGACTTCAGGACATGACACCATTG TACTGGCTGGAGCTGAATATGGTAGTGGAAGTTCCAGAGATTGGGCTGCCAAGGGTCCCATGCTATTGGGAGTTAAAGCT GTGATAGCTAAAAGTTTTGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGTATCATTCCTCTTTGCTTCAAATCTGG TGAGGATGCTGACACATTGGGATTGACTGGCCATGAACGGTTTTCCATTGACCTTCCAAATAATATCAGTGAGATAAGGC CTGGCCAAGATGTCACTGTCAGAACCGATAGTGGAAAATCTTTCACCTGCACAGTTCGCTTTGACACTGAGGTGGAGCTG GAGTATTTTAACCATGGAGGCATTCTTCCATATGTCATCAGGAATCTCACTAGGCAGTGA
Protein sequence (LotjaGi3g1v0188900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSASSLLRSSRSKLFPPSSLSRIFPSRSSPHRSPAFSTAARSAVHRWSHGALWRSPSTLRPQIRAFVPLIERFHRSIA TSAGENPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWESSFVKQVE IPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFA FLKWGSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTEGVLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPM SMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMRRLSLADRATIANMAPEYGATMGFFPVDNV TLQYLKLTGRSEETVEMIEAYLRANKMFVDYNEPQQERVYSSYLELDLDEVEPCISGPKRPHDRVPLKEMKTDWHACLDS KVGFKGFAIPKEAQGKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLKVKPWVKTSLAPGS GVVTKYLLQSGLQKYLSEQGFQIVGFGCTTCIGNSGDLDKSVASAISENDIIASAVLSGNRNFEGRVHALTRANYLASPP LVVAYALAGTVDIDFEKEPIGTGKDGKNIYLRDVWPSTEEIAQAVQSSVLPDMFQSTYEAITKGNAMWNQLQVPAEKLYS WDPNSTYIHEPPYFKNMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLQRGVEQKDFNSYGSRRGN DEIMARGTFANIRLVNKLLNGEVGPKTVHIPTGEKLSVFEAAEKYKTSGHDTIVLAGAEYGSGSSRDWAAKGPMLLGVKA VIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERFSIDLPNNISEIRPGQDVTVRTDSGKSFTCTVRFDTEVEL EYFNHGGILPYVIRNLTRQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| Phobius | 10 | 14 | 5 | - | – | |
| Phobius | 15 | 979 | 965 | - | – | |
| PANTHER | 30 | 979 | 950 | 0.0 | ||
| PANTHER | 30 | 979 | 950 | 0.0 | – | |
| Gene3D | 85 | 453 | 369 | 1.5E-182 | – | |
| SUPERFAMILY | 100 | 714 | 615 | 3.27E-233 | ||
| TIGRFAM | 104 | 976 | 873 | 0.0 | ||
| Pfam | 146 | 649 | 504 | 1.4E-183 | ||
| CDD | 167 | 651 | 485 | 0.0 | – | |
| PRINTS | 228 | 241 | 14 | 9.7E-46 | ||
| PRINTS | 252 | 260 | 9 | 9.7E-46 | ||
| PRINTS | 281 | 294 | 14 | 9.7E-46 | ||
| PRINTS | 295 | 310 | 16 | 9.7E-46 | ||
| PRINTS | 357 | 370 | 14 | 9.7E-46 | ||
| PRINTS | 371 | 384 | 14 | 9.7E-46 | ||
| PRINTS | 453 | 467 | 15 | 9.7E-46 | ||
| Gene3D | 454 | 677 | 224 | 3.3E-112 | ||
| ProSitePatterns | 514 | 530 | 17 | - | ||
| PRINTS | 518 | 529 | 12 | 9.7E-46 | ||
| ProSitePatterns | 580 | 593 | 14 | - | ||
| PRINTS | 580 | 593 | 14 | 9.7E-46 | ||
| Gene3D | 678 | 739 | 62 | 4.6E-27 | – | |
| SUPERFAMILY | 718 | 975 | 258 | 3.92E-86 | – | |
| Gene3D | 741 | 978 | 238 | 1.3E-114 | ||
| CDD | 755 | 925 | 171 | 2.569E-111 | – | |
| Pfam | 778 | 905 | 128 | 3.4E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0188900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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