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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0247900 |
| Transcript ID | LotjaGi3g1v0247900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ketol-acid reductoisomerase (NADP(+)); TAIR: AT3G58610.1 ketol-acid reductoisomerase; Swiss-Prot: sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplastic; TrEMBL-Plants: tr|G7JCK0|G7JCK0_MEDTR Ketol-acid reductoisomerase; Found in the gene: LotjaGi3g1v0247900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:40943977..40947706) extracted from Lotus japonicus Gifu genome v1.2.
AAACCCTAGCTAAGCCCGCCGCTAAATGCTTCGCCGCCACCAATTTGTCGTTTTCCAAGCCCAGTCTCCGCCCCCTTAGG GCTCAGCGCTGCGTCGCCGTCGGCACCGGCGCGCTCGGTGCTCGTATGGTGTCGGCGGCGCCGGTTGCGTCACCGGCGAA GCTCGATTTCGACACTGCTATCTTCAAGAAGGAGAGGGTTAACCTCGCTGGCCACGATGAGGTTTGGAACTCTTCGAAAT CTCTCACTTCACTGTTGAGAAATGAACCTTATTTTTAATTTTTGGGTGATTTTTTGCAGTATATCGTGAAAGGAGGGAGG GATTTGTTCCATTTGTTGCCGGATGCATTCAAGGGTATCAAGCAGATTGGTGTCATCGGATGGGGTTCACAGGTAAACAA AAGTTGAATTTTTTAGCTCATTTTTCCATTTTGGAATGGTTTTGTTTTGTCTGAGATTGTTGTATAAACCTTATCTAGTG TAGCTAATCTATAGTATTGGATCTTGGCACATACAAGAGTTAATATGTGTATTATATGGTTTCACTGGATGTTAATGAAG CAAGTACTTGCTTCCACCTTGAGTGCTTTGTTTTGTAAAAAGTGTAATGTTGTTTCAAAAGGAACCCAGAGACATTATAA GTTGACTGATGCATTTTTGAAATGTCTGTTCAAGTGTTTTTCTGGGAGGAATATTTTTGCGGTTAGAGTATCTTAAGTTA TCTCTTGGATACTTTATGTTGTAATTTAACATTTTTAGTCATCCCTTCAAACCTTTTGGTGATTACTTTACTTTTCTGAA TAATATTTTAAGATTTCTTTTTCAAGTTAATATTTTTTATTATTTTTCTTCTTATTACATAATTTTGAAATGATTGCTAT CTTTGCACTACTTTCACCAGGGACCTGCTCAGGCACAGAACCTAAGGGACTCCCTTGCTGAAGCAAAGTCTGATATCGTG GTTAAGGTGATTACGGGATTCATTATTTTTTCAGTTCATTATTTTGTATTGATGTACATGTAATATGTAATCATGTAGTT ACTGGATAAGAACTTTTGATTGACTGGTCTCATCCCAGAACCTAGTATGTTAACGTGTTTGTCTTTTGACAATACAGATC GGACTAAGAAAAGGTTCTAGTTCCTTCAATGAGGCCCGGGGTGCTGGTTTTAGTGAAGAGAATGGAACTCTAGGTGACAT ATATGAAACTATCTCAGGGAGTGATCTGGTGTTGTTGTTAATTTCTGATTCTGCTCAGGTTTGTAAATTAAAAAAGGGCT GCAGATTTTTTTTTTTGGCTTTTTGGTTTGTCTTCGTTGCTCTCTATTATATTCTGATTGACTACCTGCTATTTTTTATT CTGACTAAGTTCTTGACTGGTGCTCCTATAATGTTATCCTTATGTTTCCAGTTATTTTGTCATGTCTTCTATTACCTGAG CTGGGTGCTCTGATTTGATCACTTGGTATAAAACATATAGATAAGGTAATGGTAGAGAAATAGGAAACAAGATATGTACT ATGTGTCAGAGAACAATATCTTGGTGATGCTGATCATGTTTTTAATTAATGCTTGAAGTTCATGATATTCATTCCTTCCT AGGACAGCCAATAGTTCGTATCTCCATAGGTTTTCCTTAGGAACCCTAGTTTTTTTGTATTTGGCTATAGAAGTAGACCG GTTGCATCATGCTTCCGTGATTTTGCAACCCCTCTTTCCACTTATGATGTTTTTTTAATATATTTTTCTCTATCTGGCAG GCAGATAATTATGAAAAAATATTTTCTAGCATGAAGCCAAATAGCATACTTGGGCTGTCCCATGGTTTTCTTCTTGGACA TTTACAATCACTCGGACTTGATTTTCCTAAGCACTTCAGCGTGATTGCTGTGTGCCCAAAGGGGATGGGTCCATCTGTGA GGAGGCTGTATGTCCAAGGTAAAGAGATAAATGGTGCTGGAATTAATTCAAGTTTTGCGGTCCACCAGGTAGTCCTCTAT CTTATTCTCTCTTCTCTCACACTTCATTGTGTCCTGCTTATAATTATTTCATTTAATGGATTTATTTTTCTGGGGCTAAG CTTACTATCATTGCATGCAGGATGTGGATGGCAGGGCCACTGATGTTGCTTTGGGATGGTCTGTTGCTCTTGGATCTCCT TTTACATTTGCCACTACATTAGAGCAGGAATACAAGAGTGACATCTTTGGGGAGCGAGGTCAGAATATCTCTCTCGCAGT GCATTGATACCAATCTTTGAAGACTTATGGCCTAACTTTTGCTTTTATTGATTATAGGAATTTTACTTGGTGCTGTTCAT GGAATTGTTGAATCCTTGTTTAGGAGGTACACTGAAAATGGAATGGCTGAAGATTTGGCTTATAAGAACACTGTTGAGTC CATAACAGGGATTATATCTAAAACTATCTCAACTAAGGTTGTGATCTCTTACTCATTTTAGTGCTGAATAGTCTTTAGGA TTTTTTCCTGAGCATGTGATGGGCTTTTTGTGAGCTGTAACATGAACCTTTGTTCATTTTATTTGGATAGGGCATGTTGG CTGTATATAATTCTTTCTCAGAAGAAGGAAAGAGGGAATTTGAGAAAGCATATAGTGCTTCATTCTATCCTTGCATGGAC ATTTTGTACGAGTGCTATGAGGATGTAGCTAGTGGTAGTGAGATTCGCAGTGTTGTTTTGGCCGGACGTCGCTTTTATGT AAGTGCACATTTATTTCTAGTTTAAGGCTGCTTTTTATTCAACAGATTTACAATTGCACCTGTGTTTTACAGGAGAAAGA AGGTCTGCCTGCATTTCCCATGGGTAAAATTGATCAAACCCGGATGTGGAAGGTTGGTGAGCGTGTTCGTTCCACAAGGC CTGCAGGTGATCTAGGCCCTTTGAATCCATTTACTGCTGGTGTCTTTGTGGCATTGATGATGGCCCAGGTATCCGTTCTT ATTCTGTTAGCAATTTTTCTCGCTAGTTTATTTGTAGTTGATATGTACTTTGAACATATATTCCCTGCTGCAAGCATTCC TATCTTTGTCCTCAAACTGTGAAAAAGTTCTTTTGAAGTGAGATTTTTTCCAACGTAATCATGTATCTTAAGTTTCAGTA CGTTCAATTCTCTACACTTTTAATTAAATTGAAGGAAAATATAACCTTGCTCGTTTTAGTAAATCTCTGTCCTCAAATTT CAGACTTACTAGTGACTAGTGTCTATCTATCAATGGCAAAAGATGTATTCTTATAAATTCTTACCTTAACAATCATTTTT CTTGCATATCTTTTTCTTGGGCTAGAATGAATACAAAGGTGACCTTTTGTTTTTTCACATTTATGATCATAAAATTTGCA GATTGAGGTCCTGAGGAAGAAAGGGCATTCATACTCTGAAATCATCAACGAGAGTGTGATTGAGTCAGTTGACTCTTTGA ATCCATTCATGCACGCTCGTGGTGTTTCTTTCATGGTTGATAACTGCTCAACCACTGCAAGGTTGGGTTCAAGGAAATGG GCTCCCCGGTTCGATTACGTCCTGACTCAGCAGGCCTTGGTGGCTGTGGACAATGCAGCACCTATCAACCAGGACCTGAT CAGCAACTTCCTGTCAGACCCAGTGCACGGAGCCATTGAGGTTTGTGCAGAGCTTAGACCAACTCTGGACATTTCAGTGC CACCAGATGCAGACTTTGTCCGTCCTGAGTTGCGTCAATCTAGCTATTAG
CDS sequence (LotjaGi3g1v0247900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTCGGCGGCGCCGGTTGCGTCACCGGCGAAGCTCGATTTCGACACTGCTATCTTCAAGAAGGAGAGGGTTAACCT CGCTGGCCACGATGAGTATATCGTGAAAGGAGGGAGGGATTTGTTCCATTTGTTGCCGGATGCATTCAAGGGTATCAAGC AGATTGGTGTCATCGGATGGGGTTCACAGGGACCTGCTCAGGCACAGAACCTAAGGGACTCCCTTGCTGAAGCAAAGTCT GATATCGTGGTTAAGATCGGACTAAGAAAAGGTTCTAGTTCCTTCAATGAGGCCCGGGGTGCTGGTTTTAGTGAAGAGAA TGGAACTCTAGGTGACATATATGAAACTATCTCAGGGAGTGATCTGGTGTTGTTGTTAATTTCTGATTCTGCTCAGGCAG ATAATTATGAAAAAATATTTTCTAGCATGAAGCCAAATAGCATACTTGGGCTGTCCCATGGTTTTCTTCTTGGACATTTA CAATCACTCGGACTTGATTTTCCTAAGCACTTCAGCGTGATTGCTGTGTGCCCAAAGGGGATGGGTCCATCTGTGAGGAG GCTGTATGTCCAAGGTAAAGAGATAAATGGTGCTGGAATTAATTCAAGTTTTGCGGTCCACCAGGATGTGGATGGCAGGG CCACTGATGTTGCTTTGGGATGGTCTGTTGCTCTTGGATCTCCTTTTACATTTGCCACTACATTAGAGCAGGAATACAAG AGTGACATCTTTGGGGAGCGAGGAATTTTACTTGGTGCTGTTCATGGAATTGTTGAATCCTTGTTTAGGAGGTACACTGA AAATGGAATGGCTGAAGATTTGGCTTATAAGAACACTGTTGAGTCCATAACAGGGATTATATCTAAAACTATCTCAACTA AGGGCATGTTGGCTGTATATAATTCTTTCTCAGAAGAAGGAAAGAGGGAATTTGAGAAAGCATATAGTGCTTCATTCTAT CCTTGCATGGACATTTTGTACGAGTGCTATGAGGATGTACGGATGTGGAAGGTTGGTGAGCGTGTTCGTTCCACAAGGCC TGCAGGTGATCTAGGCCCTTTGAATCCATTTACTGCTGGTGTCTTTGTGGCATTGATGATGGCCCAGATTGAGGTCCTGA GGAAGAAAGGGCATTCATACTCTGAAATCATCAACGAGAGTGTGATTGAGTCAGTTGACTCTTTGAATCCATTCATGCAC GCTCGTGGTGTTTCTTTCATGGTTGATAACTGCTCAACCACTGCAAGGTTGGGTTCAAGGAAATGGGCTCCCCGGTTCGA TTACGTCCTGACTCAGCAGGCCTTGGTGGCTGTGGACAATGCAGCACCTATCAACCAGGACCTGATCAGCAACTTCCTGT CAGACCCAGTGCACGGAGCCATTGAGGTTTGTGCAGAGCTTAGACCAACTCTGGACATTTCAGTGCCACCAGATGCAGAC TTTGTCCGTCCTGAGTTGCGTCAATCTAGCTATTAG
Protein sequence (LotjaGi3g1v0247900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSAAPVASPAKLDFDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKS DIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETISGSDLVLLLISDSAQADNYEKIFSSMKPNSILGLSHGFLLGHL QSLGLDFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYK SDIFGERGILLGAVHGIVESLFRRYTENGMAEDLAYKNTVESITGIISKTISTKGMLAVYNSFSEEGKREFEKAYSASFY PCMDILYECYEDVRMWKVGERVRSTRPAGDLGPLNPFTAGVFVALMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMH ARGVSFMVDNCSTTARLGSRKWAPRFDYVLTQQALVAVDNAAPINQDLISNFLSDPVHGAIEVCAELRPTLDISVPPDAD FVRPELRQSSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 333 | 333 | 0.0 | ||
| PANTHER | 1 | 333 | 333 | 0.0 | – | |
| Gene3D | 1 | 228 | 228 | 1.4E-95 | – | |
| SUPERFAMILY | 13 | 231 | 219 | 5.77E-51 | ||
| ProSiteProfiles | 35 | 233 | 199 | 50.359 | ||
| Pfam | 53 | 227 | 175 | 5.4E-30 | ||
| Gene3D | 229 | 334 | 106 | 1.4E-51 | ||
| ProSiteProfiles | 234 | 486 | 253 | 23.209 | ||
| Pfam | 236 | 334 | 99 | 8.3E-25 | ||
| SUPERFAMILY | 236 | 488 | 253 | 3.85E-84 | ||
| PANTHER | 333 | 490 | 158 | 0.0 | ||
| PANTHER | 333 | 490 | 158 | 0.0 | – | |
| Gene3D | 335 | 488 | 154 | 9.4E-84 | ||
| Pfam | 360 | 431 | 72 | 5.9E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ketol-acid reductoisomerase activity | Catalysis of the reaction: (R)-2,3-dihydroxy-3-methylbutanoate + NADP+ = (S)-2-hydroxy-2-methyl-3-oxobutanoate + NADPH + H+. | ||
| Biological process | Branched-chain amino acid biosynthetic process | The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0247900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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