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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0278500 |
| Transcript ID | LotjaGi3g1v0278500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT1G07710.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr|A0A1J7IB00|A0A1J7IB00_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0278500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:55232639..55238946) extracted from Lotus japonicus Gifu genome v1.2.
GTATTGTTGTTACATTACAAAGGAAACATGTAAATATTTGGTGTTAAGCAATTGCATCTTCTTCACTCGCGCCACTTTGC GCGTGGTTCTGTTATTTCCGTTTGTCTTCATTTCGCAGGTTTTGCCTCTCTCTTTCTCTCTCTCAAAAGTCTCTTCATGT CCCTATTTGATTCCCAAACATAAATCTTTTCGATTCAAATTCCTCAAACATCATCACCACCTTTACAAAAGTTGCTTCAT TTTCGTTGAGCTTGGTGCGTGTGATACAGATTCATATAAAGCTGTCTGTTCCTCACATGTGTCTTTCACGTTTCATTTCT TAATTCCCTGCTTCTCTGTCTTGTTGTTTTTCTCACTCTTTCTTTCTTTCTTTCTTTCTCTGTCTCTCCCAACAAAATAT TTCTCATATTACTTTTTGTGCATGCACCTTATATGTTTGAGTAAATGCGCCATTGAACATTCGTTACAGGGTGTGCCACC AAGCTCATGGGTTTCTAAGAGCCCCCTTCCTCAAATTCTCTTTTTTTATGGTTTTCATGGTGGCACAAGGAAGCTGGTAA AAGGGTTGAGGTTCTTCCGTTAAACCCAGGTCAAATTCATCTTCAAGTTTCATTCTTTCTTAATTTCTTTCACATAATGA TTCATTATTCAAGAGATGCATTAACCAAGCTATTATTGCTTTCTTTTTGTTTTTTTTCAAAAAATTTCTATGTGGGGTTG ATTGTTTAGAAACTCTCTCTCTCTCTTAAAGGACAATGATAATGCAATAAAAAACATATCCAGGTGCAATGTTTTTAACC CTCTTTTTTTTTTGTGACCAGACAGGCAGAAAGAAGGATCAGATATTTCTGACATGAGAGATAAGAAATAATCATGAAGC TTTGCAATAAATTAATAAAAATATATTCCACAATAATTTGATGATCCTCTCCTTTGGGTTGCTGTGTTATGAAAGATGCA AGTGTTGACCTGGGATTTTTTGGAGGAATCAAGAAGAGAAGGTTGTGATATATGAATTAGCATAAAAAAAGAGGAGATTT TTAGGGAGGTGAATCCAATATGGCTGCGCCTGTAAGCACCCCTAGGAAAAAAATGACCAAACAATTGACAGGAAAAAGGG ATGATACCCCTTTGCATTCTGCAGCAAGAGCAGGGAATCTGGCTGTGCTGAAGGATACCCTTACCGGTATCGAAGAGGAT GAACTTCATGAGTTATTGGCCAGGCAGAATCAAGATGGAGAAACAGCGCTTTATGTGGCTGCTGAATATGGTTATGTTGA TGTAGTCAGGGAGATGATTCAGTATTATGATCTTGCTGATGCTGGGATCAAAGCAAGGAATGGTTTTGATGCATTTCACA TTGCTGCCAAACAAGGGGATTTAGGTATGTCTTCAATGTAGTTTTCGTATATTTGTTTTCTTTGTAGTTTGCACCATATG TGAAATGTGTATCAACTTCTTTTTTCTGGGAATCAATTCTGTCCCCCAGAAGCTACTCACATAGTGCAAGTTTGAATCAG GGTCTAATATTGATTATGAATTTATGATAAATTTGAGTCGAAAGTGATGTGATGTGATTTATGTAGGGATACTCTCACGA TTAAAGTGGGTTTTGTAGGGTAATATTGTGAAATTCAGTTGTGAAATCTTAGAATTGATTATGTTCAACATAGAATCTAC TCTCTCTAGCTTCCAACAAAATTGATTTTGGAGCTGAAACCAATTCTCCAAAATGACTCTCAACATCTATTTTATAATCC AAAATTGATTCTAATCTATAATGTCAATTCTCCAAAATGGAACCCAAACATAAATATATCAGTTTTACTGAAGAATTGAT TTTGATTTTAGAATCAGTAAAAGTGTTTCCAAACATGCACTCAGATTCTGTTTTCCCTATTGCAGATTTACTGAAGATCC TTATGGAGGCTCATCCTGAATTGTCAATGACTGTGGACCCATCCAACACCACAGCTTTGCACACTGCTGCAACACAAGGG CATACTGAGATAGTGAAGTTCCTTTTGGAAGCAGGAAGTAGCCTTGCAACCATTGCAAGAAGTAATGGGAAAACAGCTCT GCATTCTGCTGCGAGAAATGGGCATGTGGAGGTTGTGAAAGCGCTTCTTGAGAAGGAGCCTGGAGTTGCAACACGGACCG ATAAGAAGGGCCAGACAGCGCTTCACATGGCAGTGAAGGGACAGAATCTTGAGGTGGTGGAGGAATTGATAAAAGCAGAT CCCTCGACAGTAAACATGGTAGATAATAAGGGAAACACAGCATTGCATATAGCAACCAGGAAAGCCAGGACCCAGGTACA TTGAAATTTGCTCATAACTTCATATATAGTGTTGTGACTGTAAGTGAACTGCGATTTAGGATCACCATCCGTATGTTCTT TTCTATGGTTTGTCATTAAAAACTATTACCCTCAGCTTTGAGTACTCATAGTTTTGACAGTATTCTCCAGTAATGGTTCT GCTATCAGCTTGAATGATTTTTCTAGAAACAAGCATTTCAATTATTACAAATTTAGTACAAGTATGTTTTGTTTGTTTTT GTCATAAACGTGGATGTGAAAAGAATCCAGGTTTGGCTCACATTTGGATTGATCTAGTAAATGATTGGTCCCGACCTGTT TATTGTCCTCCAGAACATAAAGTTTTGATGTGTGGACATCTTAGAACAAAGTAAGAGCCAGTTTGTACATTACTTGAGAT TTGAATAATTTTCCATCCCCAGCAGTGATAAAAACATGGGTGCCAAATCATGTAATCAGCCAGGCAATATTTTATTTTTG ATATTAATATACATCATCCAAGAACTGAAGTTGGTTAGTTGAATTTAAGTTCTAGTTCTCATGGTAGTAGCTTTTTGATG CACTATTCTGAAGGTGTCTTGTTAGCAGATCATTTATGCAACGCCTAGATCATAATTAATTATTAAGCAAGCAACTAAAA CTTTTAGGTTAAGTATATAATAGTCTTAAAAGGTTACTGTTGAATGTTGATAGATAATACTTAATAGTGATATTCCTCAT TTATAAAACCATCCTTTTCATATAAGCAATAGCAAAAACCCCTTGATGATATGAGAATGAGTCACCTCATTCTATTTGTC CAGTCCAAACTATCTAAGTGCATGTCTGTTTTCACGATTTGCACAGAATCTGAGGCATGTTTACTCATAAAGTAACACTT GTAGCTTTTAAGCAGAAGATATTTTAGAACATCTATCTGTAGAACCAAACATACTATAAAAGTTGCTTCAACTCAAATAA ACTGCTGGCTAGTATATGGCAATGCTCCTGATATGTGAAAATCTGTTTGAAAAATTATTTCAATATCTGTTTTTGTGTCC ATTTGTTGTGCCCTGTGATATGTCGGATTAGGGGGAGAGGCTAAAATATCTTAACTGATCACTGCAGATTGCAAAGATGC TTCTCGAACATAAGGAAACAAATACAAAAGCTGTTAATAGATCTGGTGAAACTGCTGTAGACACCGCTGAGAAAATGGGG AACCAAGATGTCAAAGCCATTTTGTTGGAACACGGTGTTCAGAGTGCCAAAGCCATAAAGCCACAAGGTACTTCTACAGC CCGTGAATTGAAACAAACCGTTAGTGACATAAAGCACGAGGTCCATTACCAGTTGGAACACACGCGCCAAACCAGAAAAC GTGTTCAAGGAATCGCGAAGCGCATCAACAAGATGCACACAGAAGGGCTCAACAATGCAATCAACTCCACAACTGTGGTA GCAGTCCTAATTGCCACTGTTGCCTTTGCTGCTATTTTCACAGTCCCTGGCCAATTTGTTGATGACCCAAAAAACATTCC TCCTGGGATGTCTCTTGGTGAAGCAAACATAGCCCCTCAAGCTCCGTTTATCATTTTCTTCATCTTTGATTCGATCGCGC TCTTCATTTCGCTGGCAGTGGTGGTGGTGCAGACCTCGGTCGTGGTTATTGAAAGCAAAGCAAAGAAGCAGATGATGGCC ATCATCAACAAGCTAATGTGGCTGGCTTGTGTGCTTGTTTCAGTGGCCTTCTTGGCACTGTCTTTTGTGGTGGTAGGAAA GGAAGAGAAGTGGCTGGCAATTGGAGTTACCATTATAGGGACAACCATAATGGCAACCACGTTGGGAACCATGTGTTACT GGGTCATTAGGCATCGCATTGAGGCCTCAAATTTGAGGAACATTCGGAAATCTTCATTGGAAAGCAAGTCAAGGTCTTTT TCACAGCCTGCTCTTTCAGATTCAGAGCTACTTAACAATGAGTTTAAGAAAATGTATGCAATTTAGGAGTTGAGTTACTG AGCCTGTTCCCTTTCCACTCTTTTTTTTTGTCCAACTATATCCAACTAAGGTGGAACTTCCAAATGTATATCTCAGAAAA AAGAAAGATGGTTGAACCTCCAAATGTATATATATCTCAACAAGAATTAATGGCTAATCTTAATAAATCATATCAATAGC TAAAGGGGCAAAACATAGTTGAATTAGTCTAAACCGTCCAATTCTATCTTTTCTGGCAACAGATTCCTTGAGTTTCTCGC TGTTATGGAGCGTTTTACAGATACAGACATCACTGCAACATTTATTCATAGTTGATAGCTTAGCAAAAATAAACCACCAA ATGACTAATGAGATCATAAATATGTTCATGTGTAAGTTATACTCTATATTTGGATTGATGGAACATACTGAAACGGAATG GAATATAATATAATGGAACGAAATGAAGTGAGATGAAATGAAATAAAAATTTCTACTATTGGTAGTTAGAACCCAAAAAT TGGAAAACAAATTTAAATGTTTCTAAAGGTTCAGCAATTCAGTTGTTTGCTGTATTGATCAAGCACCACTTAGGGCTCAT TGAAAAAAAAAACAGCTTATTACTGCTCAGGTCGTGATCTGTGGCTGACATGTTCTTAACAGAACTCATTTAGATGATAG GCTAAAGGAAAATCTTTTGTTGACACTCAAACCCACCTTTATCTTTAGAGAGGGATATGAATAGAAGAGTGAGAAATGAA AGATATAATGTGGTATAACAGAAGACGGACAGACAGACAAGATAAACTAGGTGAGAAGGAAATATGAGAGAAGCTAGGTG TGAATATATTAGTGTTGATAGGCTAAATATGACTATATAAATGAATTAAGTTTCATTTACACTGAAAATGAGGTGGAGAG TAGAGAAAGATAGGAAGAAAAGATAAAATAAAAAAAATAATAAGAAATGTGATGAGTAACATGAATGAAAGAAAAGAAGA TAGTGAATTGGAAATGAAGCAAATACGTGAATGAATCATAACTTAACAGTCTACATGAAAATCATGTTCAGCAAGAATGG GGAAGTAATCATTTGGCACTTTACTGAATATAACTATGCGGCAAGTGTAATCATTTGTTTTTCTGGCTATCTATGTCGGT GCCAATTATAGGGAGAAAAAAAAACACGATAAGCTAATCCTTCTTATTTCCCTATTTGGAGGCTATATTCTGCTTCAGGA CAGGTTAAGATAACTACATACTTGTGCGTTCAAACCTATTTAAGCGCATGCATGCATTTGGGCTGGGCAAACAGACAGCT AGGTTATCCTTAAGTCTACAATTTTTATCTATAATCCATATTAAGGTGCCAAAAAAAAGATAGTAGCTCTCAGCGCATCA AATTTAAGAGTGCAATAACGCCAAATTGAACAAACGCTAATGCTGCGAAATTACTTGCATCCTATCTAAACAAATCCATA AACAGAAACTTTACATTGAAGGTTTTCTTTCCTCTCCTCATCAATGTTAAGCCAGGGGTCTCTTTTCCACCATTTCATAA TAGAGAACAAAATTATCCTGCGAGGAGGTTGAGCATTAGAGGCCTGAATGGGACAAAATTGTTCAAGAATGATAAAACAT ATAATTGAAGTCGGGTGGGTGCGGGTGTCGACTCATACAGTATATACAGTATATGTTTACAAAAACTCACCTTCTGGACC GTTTTAAAACTGCTTGGATCAAAACAATGGTAAGATCCTCTCTCGTAGGCGTTTGTTTTGACAAGTGGCTCCATGTTGGG AACTCTTATAAACCACAAACGATGTTCTTTGTGATAAAACCAGCCCCGTTTGTAACTGAGAGCAAAGACCCTACCTTGTC AGTAATTATTGCATGGATAAAACACTTGAATTTGATAAAATAATACTTGTATTTCATTGATAATACTTGACTAGACTACA GTATATATAGACTAACAAATAGATAAAAAGAAACTAAATCTATCTAAACCTATCTCTATTTAAATAGA
CDS sequence (LotjaGi3g1v0278500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCGCCTGTAAGCACCCCTAGGAAAAAAATGACCAAACAATTGACAGGAAAAAGGGATGATACCCCTTTGCATTC TGCAGCAAGAGCAGGGAATCTGGCTGTGCTGAAGGATACCCTTACCGGTATCGAAGAGGATGAACTTCATGAGTTATTGG CCAGGCAGAATCAAGATGGAGAAACAGCGCTTTATGTGGCTGCTGAATATGGTTATGTTGATGTAGTCAGGGAGATGATT CAGTATTATGATCTTGCTGATGCTGGGATCAAAGCAAGGAATGGTTTTGATGCATTTCACATTGCTGCCAAACAAGGGGA TTTAGATTTACTGAAGATCCTTATGGAGGCTCATCCTGAATTGTCAATGACTGTGGACCCATCCAACACCACAGCTTTGC ACACTGCTGCAACACAAGGGCATACTGAGATAGTGAAGTTCCTTTTGGAAGCAGGAAGTAGCCTTGCAACCATTGCAAGA AGTAATGGGAAAACAGCTCTGCATTCTGCTGCGAGAAATGGGCATGTGGAGGTTGTGAAAGCGCTTCTTGAGAAGGAGCC TGGAGTTGCAACACGGACCGATAAGAAGGGCCAGACAGCGCTTCACATGGCAGTGAAGGGACAGAATCTTGAGGTGGTGG AGGAATTGATAAAAGCAGATCCCTCGACAGTAAACATGGTAGATAATAAGGGAAACACAGCATTGCATATAGCAACCAGG AAAGCCAGGACCCAGATTGCAAAGATGCTTCTCGAACATAAGGAAACAAATACAAAAGCTGTTAATAGATCTGGTGAAAC TGCTGTAGACACCGCTGAGAAAATGGGGAACCAAGATGTCAAAGCCATTTTGTTGGAACACGGTGTTCAGAGTGCCAAAG CCATAAAGCCACAAGGTACTTCTACAGCCCGTGAATTGAAACAAACCGTTAGTGACATAAAGCACGAGGTCCATTACCAG TTGGAACACACGCGCCAAACCAGAAAACGTGTTCAAGGAATCGCGAAGCGCATCAACAAGATGCACACAGAAGGGCTCAA CAATGCAATCAACTCCACAACTGTGGTAGCAGTCCTAATTGCCACTGTTGCCTTTGCTGCTATTTTCACAGTCCCTGGCC AATTTGTTGATGACCCAAAAAACATTCCTCCTGGGATGTCTCTTGGTGAAGCAAACATAGCCCCTCAAGCTCCGTTTATC ATTTTCTTCATCTTTGATTCGATCGCGCTCTTCATTTCGCTGGCAGTGGTGGTGGTGCAGACCTCGGTCGTGGTTATTGA AAGCAAAGCAAAGAAGCAGATGATGGCCATCATCAACAAGCTAATGTGGCTGGCTTGTGTGCTTGTTTCAGTGGCCTTCT TGGCACTGTCTTTTGTGGTGGTAGGAAAGGAAGAGAAGTGGCTGGCAATTGGAGTTACCATTATAGGGACAACCATAATG GCAACCACGTTGGGAACCATGTGTTACTGGGTCATTAGGCATCGCATTGAGGCCTCAAATTTGAGGAACATTCGGAAATC TTCATTGGAAAGCAAGTCAAGGTCTTTTTCACAGCCTGCTCTTTCAGATTCAGAGCTACTTAACAATGAGTTTAAGAAAA TGTATGCAATTTAG
Protein sequence (LotjaGi3g1v0278500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAPVSTPRKKMTKQLTGKRDDTPLHSAARAGNLAVLKDTLTGIEEDELHELLARQNQDGETALYVAAEYGYVDVVREMI QYYDLADAGIKARNGFDAFHIAAKQGDLDLLKILMEAHPELSMTVDPSNTTALHTAATQGHTEIVKFLLEAGSSLATIAR SNGKTALHSAARNGHVEVVKALLEKEPGVATRTDKKGQTALHMAVKGQNLEVVEELIKADPSTVNMVDNKGNTALHIATR KARTQIAKMLLEHKETNTKAVNRSGETAVDTAEKMGNQDVKAILLEHGVQSAKAIKPQGTSTARELKQTVSDIKHEVHYQ LEHTRQTRKRVQGIAKRINKMHTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPKNIPPGMSLGEANIAPQAPFI IFFIFDSIALFISLAVVVVQTSVVVIESKAKKQMMAIINKLMWLACVLVSVAFLALSFVVVGKEEKWLAIGVTIIGTTIM ATTLGTMCYWVIRHRIEASNLRNIRKSSLESKSRSFSQPALSDSELLNNEFKKMYAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 354 | 354 | - | – | |
| MobiDBLite | 1 | 25 | 25 | - | – | |
| PANTHER | 2 | 537 | 536 | 0.0 | – | |
| PANTHER | 2 | 537 | 536 | 0.0 | – | |
| Gene3D | 6 | 117 | 112 | 4.0E-18 | ||
| Pfam | 14 | 82 | 69 | 1.2E-7 | ||
| ProSiteProfiles | 20 | 290 | 271 | 55.415 | ||
| SMART | 20 | 51 | 32 | 730.0 | ||
| SUPERFAMILY | 24 | 289 | 266 | 1.24E-58 | ||
| SMART | 59 | 88 | 30 | 0.017 | ||
| ProSiteProfiles | 59 | 81 | 23 | 8.736 | ||
| Pfam | 87 | 155 | 69 | 1.1E-11 | ||
| SMART | 94 | 123 | 30 | 0.015 | ||
| ProSiteProfiles | 94 | 126 | 33 | 9.431 | ||
| Gene3D | 118 | 317 | 200 | 6.5E-46 | ||
| ProSiteProfiles | 128 | 160 | 33 | 12.182 | ||
| SMART | 128 | 157 | 30 | 0.018 | ||
| Pfam | 162 | 222 | 61 | 4.2E-14 | ||
| ProSiteProfiles | 162 | 194 | 33 | 12.289 | ||
| SMART | 162 | 191 | 30 | 7.3E-5 | ||
| SMART | 196 | 226 | 31 | 1.3E-4 | ||
| ProSiteProfiles | 196 | 218 | 23 | 9.377 | ||
| Pfam | 228 | 289 | 62 | 2.1E-7 | ||
| ProSiteProfiles | 230 | 253 | 24 | 9.377 | ||
| SMART | 230 | 260 | 31 | 0.11 | ||
| SMART | 264 | 294 | 31 | 3900.0 | ||
| Pfam | 344 | 460 | 117 | 9.1E-28 | ||
| TMHMM | 349 | 371 | 23 | - | – | |
| Phobius | 355 | 376 | 22 | - | – | |
| Phobius | 377 | 395 | 19 | - | – | |
| Phobius | 396 | 420 | 25 | - | – | |
| TMHMM | 398 | 420 | 23 | - | – | |
| Phobius | 421 | 440 | 20 | - | – | |
| TMHMM | 441 | 460 | 20 | - | – | |
| Phobius | 441 | 461 | 21 | - | – | |
| Phobius | 462 | 466 | 5 | - | – | |
| Phobius | 467 | 492 | 26 | - | – | |
| TMHMM | 470 | 492 | 23 | - | – | |
| Phobius | 493 | 537 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0278500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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