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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0457700 |
Transcript ID | LotjaGi3g1v0457700.4 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | O-methyltransferase, putative; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q6WUC2|7OMT_PAPSO (R,S)-reticuline 7-O-methyltransferase; TrEMBL-Plants: tr|I3SGC9|I3SGC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0457700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87181471..87182714) extracted from Lotus japonicus Gifu genome v1.2.
TTCGTTCCAATATCAATTTTATTCTCAGGGTGTGAGCAAGGAGGAGGAAGAATCATTGCTTGGACAAGTTGAAATATGGA GGTACATGTGTGCATTCACAGACTCTGTTGCTCTGAAAAGTATTATAGAGCTGCGCGTAGCTGACATCATAGACCGTTTT GGCAAACCACTTTCCCTGTCCCAAATTGCTGCCAACATTGAAGATGCACCCTCCCCAGATGTCAAATTGCTAGAAAGATT GATGAGAGTGATGGTGAGAAGAAAGATCTTCAGTGCAGAGAAGTCAGAGAGTGGAGAGACGCTCTATGGCTTAACACGGG CTTCAAAATGGATCCTAAGGGACACAAAATTGACCTTAGCACCCATGTTGCTGCTAGAGAACCACCCTATTCACTTGAAC CCTGCTCACTACATTAGTGACACTGTCAGGGAAGGCAAGGAAAATGGCACTCCCTTTTTTAGGTGCCATGGCCATGATCA ATTTGAGATGACAGGTTTAGATGAAGAGTACAACAGGTTATTCAATGAGGGTATGGTCTGCACGGCTAGGATTGTGTCCA GGGCTGTTATCTCTGGGTACAAGGATGGGTTCAACCAGATTGAATCATTGGTTGATGTTGGAGGTGGTATTGGAGGATCT CTCTCTGAGATTGTCAGAGCCTACCCTCACATCAAAGCCATTAACTTTGACTTGCCTCATGTGGTCGCCACAGCACCACC CTACGATGGAATCACCCATGTTGGAGGAGACATGTTCGTCTCTGTTCCTAATGCTGATGCTATTTACATGAAGGTATCCA AAACTATTTCATTGCTGGTACTTAAGATTCTGGGATATTGGCTGATAACATTTTGCTTGTAAACATTATGAAAATGATCT TTGATAAATTTAGAATATCGGTGGGCATCTAACACTTTCAAATATTTCTTTTGGTGAATTGCAGTGGATTCTTCATGACT GGAGCGATGAGCATTGCATCAAGATTTTGAAGAACTGCAGAGAGGCAATACCAGAGAAGACTGGAAAGGTCATCATTGTG GATCATGTTTTGCAGCCTGAAGGGAATGAACCATTTTCTGACACTGGCCATGCATTTGACATGATGCTGCTCGCACACAA CTCTGGTGGGAAAGAAAGGACTGAAGAGAACTGGCAATATCTATTTAAAGAAACAGGATTCCCTCGTTACAACATCATCA AGATCAATGCCCTGCCATCCATCATTGAGGCATTTCCAATCTGA
CDS sequence (LotjaGi3g1v0457700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGCATTCACAGACTCTGTTGCTCTGAAAAGTATTATAGAGCTGCGCGTAGCTGACATCATAGACCGTTTTGGCAA ACCACTTTCCCTGTCCCAAATTGCTGCCAACATTGAAGATGCACCCTCCCCAGATGTCAAATTGCTAGAAAGATTGATGA GAGTGATGGTGAGAAGAAAGATCTTCAGTGCAGAGAAGTCAGAGAGTGGAGAGACGCTCTATGGCTTAACACGGGCTTCA AAATGGATCCTAAGGGACACAAAATTGACCTTAGCACCCATGTTGCTGCTAGAGAACCACCCTATTCACTTGAACCCTGC TCACTACATTAGTGACACTGTCAGGGAAGGCAAGGAAAATGGCACTCCCTTTTTTAGGTGCCATGGCCATGATCAATTTG AGATGACAGGTTTAGATGAAGAGTACAACAGGTTATTCAATGAGGGTATGGTCTGCACGGCTAGGATTGTGTCCAGGGCT GTTATCTCTGGGTACAAGGATGGGTTCAACCAGATTGAATCATTGGTTGATGTTGGAGGTGGTATTGGAGGATCTCTCTC TGAGATTGTCAGAGCCTACCCTCACATCAAAGCCATTAACTTTGACTTGCCTCATGTGGTCGCCACAGCACCACCCTACG ATGGAATCACCCATGTTGGAGGAGACATGTTCGTCTCTGTTCCTAATGCTGATGCTATTTACATGAAGTGGATTCTTCAT GACTGGAGCGATGAGCATTGCATCAAGATTTTGAAGAACTGCAGAGAGGCAATACCAGAGAAGACTGGAAAGGTCATCAT TGTGGATCATGTTTTGCAGCCTGAAGGGAATGAACCATTTTCTGACACTGGCCATGCATTTGACATGATGCTGCTCGCAC ACAACTCTGGTGGGAAAGAAAGGACTGAAGAGAACTGGCAATATCTATTTAAAGAAACAGGATTCCCTCGTTACAACATC ATCAAGATCAATGCCCTGCCATCCATCATTGAGGCATTTCCAATCTGA
Protein sequence (LotjaGi3g1v0457700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCAFTDSVALKSIIELRVADIIDRFGKPLSLSQIAANIEDAPSPDVKLLERLMRVMVRRKIFSAEKSESGETLYGLTRAS KWILRDTKLTLAPMLLLENHPIHLNPAHYISDTVREGKENGTPFFRCHGHDQFEMTGLDEEYNRLFNEGMVCTARIVSRA VISGYKDGFNQIESLVDVGGGIGGSLSEIVRAYPHIKAINFDLPHVVATAPPYDGITHVGGDMFVSVPNADAIYMKWILH DWSDEHCIKILKNCREAIPEKTGKVIIVDHVLQPEGNEPFSDTGHAFDMMLLAHNSGGKERTEENWQYLFKETGFPRYNI IKINALPSIIEAFPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 83 | 83 | 4.2E-22 | ||
PIRSF | 1 | 335 | 335 | 1.3E-118 | ||
ProSiteProfiles | 1 | 334 | 334 | 76.941 | ||
SUPERFAMILY | 2 | 86 | 85 | 1.47E-16 | ||
PANTHER | 2 | 333 | 332 | 2.9E-135 | – | |
PANTHER | 2 | 333 | 332 | 2.9E-135 | – | |
Pfam | 9 | 57 | 49 | 8.4E-10 | ||
Gene3D | 85 | 335 | 251 | 1.1E-76 | – | |
SUPERFAMILY | 90 | 332 | 243 | 4.8E-57 | ||
Pfam | 109 | 315 | 207 | 2.7E-64 | ||
CDD | 175 | 272 | 98 | 0.00192683 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. | ||
Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi3g1v0457700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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