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LotjaGi3g1v0457700.4

Overview

Field Value
Gene ID LotjaGi3g1v0457700
Transcript ID LotjaGi3g1v0457700.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase, putative; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q6WUC2|7OMT_PAPSO (R,S)-reticuline 7-O-methyltransferase; TrEMBL-Plants: tr|I3SGC9|I3SGC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0457700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:87181471..87182714) extracted from Lotus japonicus Gifu genome v1.2.

TTCGTTCCAATATCAATTTTATTCTCAGGGTGTGAGCAAGGAGGAGGAAGAATCATTGCTTGGACAAGTTGAAATATGGA GGTACATGTGTGCATTCACAGACTCTGTTGCTCTGAAAAGTATTATAGAGCTGCGCGTAGCTGACATCATAGACCGTTTT GGCAAACCACTTTCCCTGTCCCAAATTGCTGCCAACATTGAAGATGCACCCTCCCCAGATGTCAAATTGCTAGAAAGATT GATGAGAGTGATGGTGAGAAGAAAGATCTTCAGTGCAGAGAAGTCAGAGAGTGGAGAGACGCTCTATGGCTTAACACGGG CTTCAAAATGGATCCTAAGGGACACAAAATTGACCTTAGCACCCATGTTGCTGCTAGAGAACCACCCTATTCACTTGAAC CCTGCTCACTACATTAGTGACACTGTCAGGGAAGGCAAGGAAAATGGCACTCCCTTTTTTAGGTGCCATGGCCATGATCA ATTTGAGATGACAGGTTTAGATGAAGAGTACAACAGGTTATTCAATGAGGGTATGGTCTGCACGGCTAGGATTGTGTCCA GGGCTGTTATCTCTGGGTACAAGGATGGGTTCAACCAGATTGAATCATTGGTTGATGTTGGAGGTGGTATTGGAGGATCT CTCTCTGAGATTGTCAGAGCCTACCCTCACATCAAAGCCATTAACTTTGACTTGCCTCATGTGGTCGCCACAGCACCACC CTACGATGGAATCACCCATGTTGGAGGAGACATGTTCGTCTCTGTTCCTAATGCTGATGCTATTTACATGAAGGTATCCA AAACTATTTCATTGCTGGTACTTAAGATTCTGGGATATTGGCTGATAACATTTTGCTTGTAAACATTATGAAAATGATCT TTGATAAATTTAGAATATCGGTGGGCATCTAACACTTTCAAATATTTCTTTTGGTGAATTGCAGTGGATTCTTCATGACT GGAGCGATGAGCATTGCATCAAGATTTTGAAGAACTGCAGAGAGGCAATACCAGAGAAGACTGGAAAGGTCATCATTGTG GATCATGTTTTGCAGCCTGAAGGGAATGAACCATTTTCTGACACTGGCCATGCATTTGACATGATGCTGCTCGCACACAA CTCTGGTGGGAAAGAAAGGACTGAAGAGAACTGGCAATATCTATTTAAAGAAACAGGATTCCCTCGTTACAACATCATCA AGATCAATGCCCTGCCATCCATCATTGAGGCATTTCCAATCTGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0457700.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGTGCATTCACAGACTCTGTTGCTCTGAAAAGTATTATAGAGCTGCGCGTAGCTGACATCATAGACCGTTTTGGCAA ACCACTTTCCCTGTCCCAAATTGCTGCCAACATTGAAGATGCACCCTCCCCAGATGTCAAATTGCTAGAAAGATTGATGA GAGTGATGGTGAGAAGAAAGATCTTCAGTGCAGAGAAGTCAGAGAGTGGAGAGACGCTCTATGGCTTAACACGGGCTTCA AAATGGATCCTAAGGGACACAAAATTGACCTTAGCACCCATGTTGCTGCTAGAGAACCACCCTATTCACTTGAACCCTGC TCACTACATTAGTGACACTGTCAGGGAAGGCAAGGAAAATGGCACTCCCTTTTTTAGGTGCCATGGCCATGATCAATTTG AGATGACAGGTTTAGATGAAGAGTACAACAGGTTATTCAATGAGGGTATGGTCTGCACGGCTAGGATTGTGTCCAGGGCT GTTATCTCTGGGTACAAGGATGGGTTCAACCAGATTGAATCATTGGTTGATGTTGGAGGTGGTATTGGAGGATCTCTCTC TGAGATTGTCAGAGCCTACCCTCACATCAAAGCCATTAACTTTGACTTGCCTCATGTGGTCGCCACAGCACCACCCTACG ATGGAATCACCCATGTTGGAGGAGACATGTTCGTCTCTGTTCCTAATGCTGATGCTATTTACATGAAGTGGATTCTTCAT GACTGGAGCGATGAGCATTGCATCAAGATTTTGAAGAACTGCAGAGAGGCAATACCAGAGAAGACTGGAAAGGTCATCAT TGTGGATCATGTTTTGCAGCCTGAAGGGAATGAACCATTTTCTGACACTGGCCATGCATTTGACATGATGCTGCTCGCAC ACAACTCTGGTGGGAAAGAAAGGACTGAAGAGAACTGGCAATATCTATTTAAAGAAACAGGATTCCCTCGTTACAACATC ATCAAGATCAATGCCCTGCCATCCATCATTGAGGCATTTCCAATCTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0457700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MCAFTDSVALKSIIELRVADIIDRFGKPLSLSQIAANIEDAPSPDVKLLERLMRVMVRRKIFSAEKSESGETLYGLTRAS KWILRDTKLTLAPMLLLENHPIHLNPAHYISDTVREGKENGTPFFRCHGHDQFEMTGLDEEYNRLFNEGMVCTARIVSRA VISGYKDGFNQIESLVDVGGGIGGSLSEIVRAYPHIKAINFDLPHVVATAPPYDGITHVGGDMFVSVPNADAIYMKWILH DWSDEHCIKILKNCREAIPEKTGKVIIVDHVLQPEGNEPFSDTGHAFDMMLLAHNSGGKERTEENWQYLFKETGFPRYNI IKINALPSIIEAFPI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.10.10
1 83 83 4.2E-22
IPR036388
PIRSF
PIRSF005739
1 335 335 1.3E-118
IPR016461
ProSiteProfiles
PS51683
1 334 334 76.941
IPR016461
SUPERFAMILY
SSF46785
2 86 85 1.47E-16
IPR036390
PANTHER
PTHR11746
2 333 332 2.9E-135 –
PANTHER
PTHR11746:SF196
2 333 332 2.9E-135 –
Pfam
PF08100
9 57 49 8.4E-10
IPR012967
Gene3D
G3DSA:3.40.50.150
85 335 251 1.1E-76 –
SUPERFAMILY
SSF53335
90 332 243 4.8E-57
IPR029063
Pfam
PF00891
109 315 207 2.7E-64
IPR001077
CDD
cd02440
175 272 98 0.00192683 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0457700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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