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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0458000 |
| Transcript ID | LotjaGi3g1v0458000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor jumonji (JmjC) domain protein; TAIR: AT3G07610.1 Transcription factor jumonji (jmjC) domain-containing protein; Swiss-Prot: sp|Q9SSE9|JMJ25_ARATH Lysine-specific demethylase JMJ25; TrEMBL-Plants: tr|V7BAD8|V7BAD8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0458000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87213339..87220685) extracted from Lotus japonicus Gifu genome v1.2.
TTAACCTTTTACTCAGATTCTGGTTTCAATCTCTTTGTTTTCTGCTAACTTGTTCAGGAAGCTACAAAAAGTTCCTTCCT TTCTACATGGCGCGTGGAAGGAAGAAGGGGCAAGAAACACCACAAGTTCTGGGTGATGATCAGAATGGTGGTGGGAGGGT AACGGAGCAGCAGAGACGCTCAGGCAGACCAAAGAGTAAGATAATTGAGATGGATGATAGCGATAGCGGCAGTGGCGGGG ATCAAAAATTGAATAAGCGAGGTCCTAAGAGAAGAAGAAAGGTCATTAAAGAAGATGGTTCTAGTTCTAAGGCAAAGGTT GAAGAAACTGATGATCAGAACCCTATAAGTCCTGAAGGAATCAGCATTCCAGGGGGTTCCTATCAGTTTCGGAAGCGTCG TATAGTCAACAAACCAGAAGTGCACAAAATCAACAAGAGAGATTCTAAGGTGACACCATCTATCTGATCATTTATTGTAT TGTATTGTATATGGATCAGTGTTGTTAATGGCGGATAGCGTAGCGTAGTGGCAAGCCCAAAAAAGGTTATTTCGAGCGCA ATTGCGACAAATAGCGAATAATAACCGCAATAGCAGTGAATAGTGGACTAGCGGTGAACTCCCAAGGCGCTATTGCGGAA GCTATTAACAAGCCTGATATGGATATGGATGTGAATATGATGAGGCCATTTGGAAATGGGCTTATTAGAGCTTATTAGAG CTTATTGGAGCTTATCTACTAGAAAATGTGGTAAATAAGCTCCAATGAGTGCTCTTTGATTTTGCATTGAAACAGGTAAA TAGCTTCTAATTTCTTTAATGTTACTGTTTGGCAACAGGAGTCCTTAATGTGCCATCAATGTCAGAGAAATGATAAGGGC CCGGTTGTGAGGTGCACGAAATGTAACCGGAAAAGATTTTGCTACCCCTGCTTGGAACATTGGTATAACTTAATATGCCT GATCTCTTTTACTTTATTTTTCTTCATTGGATGATCTAGATTAATGTTGTCTGTTTTTAATAATTTTTGTTAGGTATCCT CACTTGAAAGAGGAGGATGTTGCTGAGAAATGTCCTGTATGCCGTGGTAATTGCAATTGCAAAACATGCATGCGGTCCGA TGAACTTCTTCAAGTCAGTTTCTCCCTCCCTTTTATATATATGATGATTTTATATATGTATTGTAAATATTGTAAATTTG AATGAGATAATTTGGTTTGTGTAGAAACTGAAGAGTAAAGAAAATACCAACGAAGAAGAAGGTGACAAGGTTGAGCTCAG TAAGTATATGCTGAAATGTCTTCTGCCGTATTTAAAACAGCTGGATGAAGAACAAATTATAGAGAAGAAGATAGAAGCTA AGAGACAAGGTATTTTTTCCTTAATAAGTTTCAGCAGAGTTATTCACGGATCGATCCATGTTGTTTGTAGATTAGTCATG AAAATGATACTGATGCACAAGTTTAAGATTAGTGGATTTGTATTCCAGTACTTCTCAATCATGCTACAAATAAGAAAAAG AGTTGTTTGTTTATTATAAGTGATTCCATGAATCCCTTTGCATCATCCTGAATGAAGACTGCAACAGGGAAACAATTGAC TGTCTTATAAGTTTTGATAAACTATTGGCTTTTTCACAGCATGACTGTTGCAACCCATTTCTTATAGTTTTTTGTTCTCT TATTAATGTGGTTTTGTTTTGCAATTAATTGGTGGGTTTTGATTCTTTATTTCAGACATTAGTGCTCTATTTCTCTTCTT GGGTTTTGGATTACTTACCTACTTGCTATCCTGCTTTATACTACTATTATTGCATGCGCTGTTGCAGTATATAGTTGAGT TTGTATCTCATTTACTACAGGGCTCTCAAGCTCAGAGCTAAAAGTAAAAGAGGCAGAATACTCTAAAAAAGAGCGCATTT TCTGGTTGGGATTCGTCTGTTTTCTTTTTGTTTTTTCAGTATCCTTATATTATTTAGTTGTTGACTCAACATTCTTTTGT AGTGATAACTGCAAGACGTCAATATTTGATTACCACAGAAGCTGTACGAAATGCTCGTTTGATCTTTGTCTTATTTGCTG CCGTGAGCTTCGTAATGGGCAGCTTCTTGGTGGTGCAGATCCGGTTGAGTTGGAGTTTGTCCTCCGAGGTCAAGGTTATT TGCATGGTATAAAAGAAAATAAAGAGGTAATAGAAAATATATCAGTTGCGGATGCCAACACAAAAATTCGTCAATGGTCA AGATCTGGTTGGCATGCTCACAAGGATGGTAGCATTCCCTGTCCACAATCCAATCATGAGAGTAACCATGGTTTTCTTGA ACTGAGAAGCATACGTTTTCTGTGTTCCATCTCTGAACTAGTATGTAAAGCTGAAGAACTAGCGGAAGCATATAAGGTTG CTGGAGAGACTTTTGATAACTGCTGTTCTTGCTTGAAACTTGATAGAAACACAGATGATGAATATACTTATATGAGGAAG GCAGCTTCTCGTGAAGATTCCATTGACAACTTTTTATACACTCCTAGGGCTGTAGATCTACAGAAGGAGGATTTAAGACA TTTTCAATCTCATTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTGCTAGAACGTTCATCTGGTTTAAGCTGGGAAC CATTTGTCATGTGGCGTGCATTTCGTCAGAAAACTAATACTAAGCTCAGTCAACAACATTTGGATGTGGTTGCAATTGAT TGCTTAGATTTGTGTCAGGTTTGTTCAATTTCTAAATCTTGATCTTGGAGGGATTTTTCCAGAAATTCTATTGTTTACCT TCATTCTCATGAAGCTCGTTTCTAACAGGACAAATCCTATTGTGAGAAGTGAAAAAATTTATTGTTTTACATCCAAGTAA TTTTGTTCATTGTTAGGAACAGGACAAATTCCAGAAATTCTATTTGTTCAATAGCTTAACAACATGAATGTTAGGATCCA ATTATTACATATAATAATTAGATCCTAACAATGAACAAATTACTTGGATGTAAAACAACTAGAAAGTGATGCAGCTGTAC AAAATCAAAGATTCCAAATAAACCTAAAATATTTCCTAATCAAGATTCAGGTCATGCACATTAACCCAGTAGAGTTCCAT TGACAATAGTCACACTAATTCTCAGCTGAGATCAAGGAAAATGGGCACCCAGACTTTTACTTGATATGTGAATTTTTTTA ACGGTATTTCTGCATTTTATTGAGTTGTTGAATAATTGCAGGTAGAGATTAATATCCACCAATTCTTTACTGGGTATAAA GACGGTCGTGAAGATTGGCTTGATTGGCCTCAAATATTGAAATTAAAAGATTGGCCTCCTAGTAACTTATTTGAGGAGCG TTTACCCCGCCATTGTGCTGAATTTATATCTTCTTTGCCATTTAAAGAATATGCAGATCCTTACATAGGTGCTCTTAACC TGGCTGTGAAGTTGCCCCAGGATTTTATAAAGCCTGACATGGGACCTAAAACATATATTGCGTATGGATTTGCTCAGGAG CTTGGGCGTGGTGATTCCGTGACTAAGCTTCATTGCGATATGTCTGATGCTGTATGTTTCCATTTCTTATTTGATTTTTG TTATTTTTTAAGAGAGTATCATAAAATGCATATTGCATAGTTTGGTAGGATGTATAATTTGTAGTCTGTGCTAGCTATGG CAGTTATCTATTCTGTTTATTGCTTTGTGTGGGTCTAAGTGTGTACTCTTGAATGAGAAAAATACATTATCTTTTTCTTT GATCTTCCTTTTCTAGGTAAATGTGTTGACTCATATTACTGAAGTCAAATTGAAACCTAAGTGCACTAGTGCTATTGAAA ATCTGATGCGAAGCCACCTTGAGCAAGACAAAAAGGAGCTACTTGGAGATGTTGAGGACGGAGAAACTAATGTTGACATG CCTGATAATACATCTTCTATCATAAATGCTTTAGACAAGGGAAATACAAGTGAACTAGGTGATGGGAAAGTGACAATGAA AGATGAATGTGGTATATTGGTTCAGGGGGATGCTTCAGAAGGTGCACTTTGGGACATTTTTAGGAGACAAGATGTACCTA AGTTGCAGGAGTATTTAAAAAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCAGTCCTGTAAACAAGGTAAAATTAGTA AGATGATTTTCCTTTATATATCTAGATGCTCCTTGTTAACTTGAGTCATTAATAAAGCTTGGTTCCTATTTAGTGGTTTT ACTTGTGGGAGCATACTGTTGTGTTCTATAGTCACTCACACATTATGCATGTATGATTTTACCTGAATGACATATTGTAT GTATGGTAATGTAGGTTATTCATCCCATCCATGATCAGACCTTTTATCTCACTGTGGAGCACAAGAAGAAGCTTAAGGAA GAGTATGGTTAGTAACTTAGTATTATTTTTTTGAAATTTCTACTTTGTTTGGGAGAGGTGTCGTTTGATACATTGACCTG TACCTTTGTATGATATCTTGTAGGAATTGAGCCCTGGACTTTTGTCCAGAAGCTAGGAGATGCTGTTTTTATTCCAGCTG GTTGTCCTCACCAAGTCAGAAATCTAAAGGTATTTACATTGTGAATTTATTTCATCTTTGATGTTTAAGTGTTTGCCAAG TAAGTGCGAGAGTACGTTGTCTACTATTATTGTATTGATTCTGACATACTATGATAGTATTGTGTCGTATCCCAATATCT TAAATTCAGCAGCACCCATTGAATCATCTTGTGCTCATTATTATTTTCTAACATGTGGACTAACTCCAAAGAAGGGGTCG GTGTCAGCTTCAAATTATATGTAGAGGATCAAGACCTTTGTCTTGTTTGGAGATCCTGTGGCATAAGATGTACTGTGTAT TTAAGTCCTCACTTAATCACCCACCTTAAGTTTTAGGGAGGAATATTAGAATATGTACTTGAGTTTATGTAATTGTACTG TGTATTTAATTGTAGTGAATGCACTAGTGATTGTTTGAATTGTGCAAATGAGTGTTTGAGCTGTGTGCAGCTCATACAGT GTGTGTAAACATATTTGTCGTCTATGGAAATCAGTGTAATAGATTAACGTAGCTGATTATGCTACTCCGCAGAATGTAGG TCTGGTAACTCTTAAGGTAGTTAGAGCTTAGCAGTCTATTAGGCCCTGCGCTGTGATTTGATACAAAAATGAAATTGTCT CTTTTTCTACTACAATCAGACTGAATTTTCTCACTTTCCTTGGCGTTGCTTTTATTTCAAGTAAGGATTGAAATGTTCTC CATGTAAGTGTCAATGATATGAATCTTCCTTTTGTAGTCATGCATCAAGGTAGCACTTGATTTTGTTTCTCCTGAAAATC TGGGGGAGTGCTTCCGTTTGACAGAAGAGTTTCGCACACTTCCGATAAATCACAGGTCGACCGAGGATAAATTGGAGGTA TGGCAGATTGCTTTATTGTTCTGTGAAATAGCATCTTCTGTCCTGATGACTGTTTTGTGCTACTTGTTATTAGATTTGAA TTATAAATCGATAGCTTTCCTAGGATTTGAACTAGACCTACTAAAAGAATATAGGTTTTTGAGGCTTTCAATGAGAGTAA TTGTTCCCAATCAGTATTAAACTGTTGAGTTGAACCTGTCTAACCATCTAGACCAAGGTGATTGATAGATATATGAATTG AACTAGGTGAGCAATTGAGGTGCAGAAGATGAAAGCAATTATGGTTGCTTTGGAAGGGAATACTCTATAACTAGGGATAT GTTTAAGGAAGCAATTGTAGAAAGGTTTGGACCTACTTCTATTCACTATTCTTTTTCAGCTTTATTTAAGTTGAAACAAA ATCAATTTGGTGGTGGAGTATGTGGAAGAATTTGAAAAACATGCTGCTTCAATCAAAGGGTTGGATGAAGCGTATTTAAT GGATATTTTTCTAAATGGATTGAAGGAGGGTATAGAAGCTAAATTAAGGTTGTTTAAGCCTCTTATTGGCAATGACGAAG CAGTCCCAGTTAATTGAAGAAAAAAATCACTATTTGCGAGGAAAAATATTGTTCGACCCATGTTTGTGAGAATAAGCAAT ACCAAGTTATATTATTTGGTGAAGAGATGCAAGTGGAGAACTTAGCAGAAAAGGAGATATGAGGTAATGAAGATGAGGTT ATGGAGGCTCAATTGTAAAGTATAGTAGGTTTGACTACTAGAAGATCTTTTATGGCTTGGGGCACAATCAATGATGAAAG GTGGTGGTTTTGCTGGATTGTGGAACACCTCACAACCTTATTTCATTGGATTTGGTGCAACAATTGCAATTACTTACATC CATAACATCTTACTTTGTAGAAGTTGGAGATGGGCATAAAATTAAGTGCCAAGGTGTATGCAGTGGTGTTATTGGTTCAA GGACTGAAAATTGAGTAGGATTTTTTCTTGTTTGGTTTGGGTGGGAGCTGATTTGGTTCTAGGGCTGGAACGTTGGCTTC TCTTAGTGAAGTTAGTGCAAACTTTTGTGATCTTATCATATGAAGATGGAAGTGGTAGGACAGAAAAGGTGGTTGAAAGG TGAAGCTAAGTTAACTAAACCTTCTGCTTATTTGAAGTCTATGAGTAAGTTCTTGGGTGAGGGTATGTAATTTGTCACTC TTTCTGCTGCTGATCACTAAAAGCTCTAATTGGGACATGAATTTTTAGTATTTTGAAGCTTTGATTGTGAGCCTTTAACA ATTGTGTTGTGTACTTGTGTTGTCATGTCAATAGTCTCTTATTGGGAATTTATGTAAAATTAGTTTTGCCTGATTGTTGC TGCTTCTGAAACAGGTGAAGAAAATGACTGTGCATGCTATGATTGATGTGGTCGAAAAGTTGAAGAATGCAAGGTTAGTG ACTGCAAACTTCAGGTTCTTGGAGTATGAACATTGATAATATCATTAGGTAGTAGTAGCATGCTTGTTTCTGAATAAACG TGAAAATTGTGAAACCAAAACATTATAAATACATTATACCTTGGCTACAATAGCACTGTTGAATTATGCTTATACACAAA CATTTTATTATGTTCTTTGGGCTGCTGATTTAAGATTTGTCTTGATTTTATGTTTATTTTACAGATCGTGTCTTGGGATC AAAGAGACGCCTGCTTTGAAGGTTTATTCTCGGAGGACGAGGCCCTTGGGGCATGAAGATGAAGAGAAGCCTGCTTTGAA GGTTTATTCTCGGAGGATGAGGCCCTTGGGTCATGGAGATGAAGAGAATGCAACATAGGTTAATTTAAGTTTAATGTTAG ATGACGTTACTAACATTGTACATTTTGTAACTTCTGAATGTATAAACGATGAAATTCTATGCATTGC
CDS sequence (LotjaGi3g1v0458000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGAAGGCAGCTTCTCGTGAAGATTCCATTGACAACTTTTTATACACTCCTAGGGCTGTAGATCTACAGAAGGAGGA TTTAAGACATTTTCAATCTCATTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTGCTAGAACGTTCATCTGGTTTAA GCTGGGAACCATTTGTCATGTGGCGTGCATTTCGTCAGAAAACTAATACTAAGCTCAGTCAACAACATTTGGATGTGGTT GCAATTGATTGCTTAGATTTGTGTCAGGTAGAGATTAATATCCACCAATTCTTTACTGGGTATAAAGACGGTCGTGAAGA TTGGCTTGATTGGCCTCAAATATTGAAATTAAAAGATTGGCCTCCTAGTAACTTATTTGAGGAGCGTTTACCCCGCCATT GTGCTGAATTTATATCTTCTTTGCCATTTAAAGAATATGCAGATCCTTACATAGGTGCTCTTAACCTGGCTGTGAAGTTG CCCCAGGATTTTATAAAGCCTGACATGGGACCTAAAACATATATTGCGTATGGATTTGCTCAGGAGCTTGGGCGTGGTGA TTCCGTGACTAAGCTTCATTGCGATATGTCTGATGCTGTAAATGTGTTGACTCATATTACTGAAGTCAAATTGAAACCTA AGTGCACTAGTGCTATTGAAAATCTGATGCGAAGCCACCTTGAGCAAGACAAAAAGGAGCTACTTGGAGATGTTGAGGAC GGAGAAACTAATGTTGACATGCCTGATAATACATCTTCTATCATAAATGCTTTAGACAAGGGAAATACAAGTGAACTAGG TGATGGGAAAGTGACAATGAAAGATGAATGTGGTATATTGGTTCAGGGGGATGCTTCAGAAGGTGCACTTTGGGACATTT TTAGGAGACAAGATGTACCTAAGTTGCAGGAGTATTTAAAAAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCAGTCCT GTAAACAAGGTTATTCATCCCATCCATGATCAGACCTTTTATCTCACTGTGGAGCACAAGAAGAAGCTTAAGGAAGAGTA TGGAATTGAGCCCTGGACTTTTGTCCAGAAGCTAGGAGATGCTGTTTTTATTCCAGCTGGTTGTCCTCACCAAGTCAGAA ATCTAAAGTCATGCATCAAGGTAGCACTTGATTTTGTTTCTCCTGAAAATCTGGGGGAGTGCTTCCGTTTGACAGAAGAG TTTCGCACACTTCCGATAAATCACAGGTCGACCGAGGATAAATTGGAGGTGAAGAAAATGACTGTGCATGCTATGATTGA TGTGGTCGAAAAGTTGAAGAATGCAAGATCGTGTCTTGGGATCAAAGAGACGCCTGCTTTGAAGGTTTATTCTCGGAGGA CGAGGCCCTTGGGGCATGAAGATGAAGAGAAGCCTGCTTTGAAGGTTTATTCTCGGAGGATGAGGCCCTTGGGTCATGGA GATGAAGAGAATGCAACATAG
Protein sequence (LotjaGi3g1v0458000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKAASREDSIDNFLYTPRAVDLQKEDLRHFQSHWSKGEPVIVSNVLERSSGLSWEPFVMWRAFRQKTNTKLSQQHLDVV AIDCLDLCQVEINIHQFFTGYKDGREDWLDWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYADPYIGALNLAVKL PQDFIKPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHITEVKLKPKCTSAIENLMRSHLEQDKKELLGDVED GETNVDMPDNTSSIINALDKGNTSELGDGKVTMKDECGILVQGDASEGALWDIFRRQDVPKLQEYLKKHFREFRHVHCSP VNKVIHPIHDQTFYLTVEHKKKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENLGECFRLTEE FRTLPINHRSTEDKLEVKKMTVHAMIDVVEKLKNARSCLGIKETPALKVYSRRTRPLGHEDEEKPALKVYSRRMRPLGHG DEENAT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 437 | 437 | 2.8E-232 | – | |
| PANTHER | 1 | 437 | 437 | 2.8E-232 | – | |
| SUPERFAMILY | 27 | 434 | 408 | 6.59E-36 | – | |
| SMART | 130 | 402 | 273 | 3.2E-73 | ||
| ProSiteProfiles | 149 | 402 | 254 | 27.298 | ||
| Pfam | 289 | 385 | 97 | 2.7E-16 | ||
| MobiDBLite | 455 | 486 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0458000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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