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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0501000 |
| Transcript ID | LotjaGi3g1v0501000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant regulator RWP-RK family protein; TAIR: AT2G43500.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp|O22864|NLP8_ARATH Protein NLP8; TrEMBL-Plants: tr|I1LQB5|I1LQB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:91958196..91964561) extracted from Lotus japonicus Gifu genome v1.2.
GTGGTTTGGTGGTTCCATGACAATAAATTTATACAAATCCAAGTGCAGCCTCTAGTTTGATTTAATTTAAATATTCCCAA AATCATTACTATATTAGTACTAATTTTATTATAATTATTGTGTCCATACACCAGAGAGGATGATTAAACAACAAGCACTA GAGCCTTGTTGTGGAGGCTGTGTGTGTGGCGAGTCGACCATGGTGATGACTGGTTTCTATTTTTAGCTACCATTTTTCTG TAAATCACCCAGTTTCATCTCTGTTATCTTTCCTTTTATAGAAACCACCTCTTCCTTTGTTACTGTTTGCTAACAATTTT TGACTTCACAGTTAAAAAACCTGTTGCTGTTGTTGTTGTTGACTTGTTGTGTTGTTGTAGTTCACTGCACCACACAGAAT CTTTCCCTCTTGTTTGGAGTTTGAGGATTCCGAGGTCGGTGCCTCGTAGGTTGTGTGGTCTGCGTGGAAAGAGAATTCTT AGGGTTTTGTGTAAAGTTTTGATTTTGACTGTCAAGTTTCAAGCTTTTGGAGATTGGAGAGCGGTTTGGGCAACTGGGTC TTTCTCATTTGCCTCAATTTGTTACATTGTTTCACTGACTGGGCATGCCATGGTTCTTCTATGGAGGTTGGGTTCAAGCA TTCAGGTATTTAGGGAAACCTAATTTTGTTTTACTTTTTTTATTTTATTTAAATCTGTTGGTTTGTTGTTTGTTTTACTT GGTATGATGTTTTAAACTTCTGTTGAGCTGAATTGTTGCAACACTTGTGCCTGTTTGAAGATTAAAATTGATTTTAGGCT TTAATTAGTAGCTTTGGGTTGGGGATAGTTGTTGGTTTCTCAGGAGTTGGTTTGGGGGTTTTCATTTTTAGGATGTGATG GCTTCTCTGCTCATTTTTACTTTCATGAAGACTTTAAAATTGGAAAATTGAAAAGTTGAAAAGAGATGGGAGTTGAACTA GTAATTCTTCAATTCTGAATCCTGATATTCATAAGTTTCGAAGACAGAATTTTAACTGAGATTATTGGTTTTTCAATGGT GAGGATGGTTAAAAGTGAGTTAAGGAAGTGAATTTTAGGTTGACGTGTACAAGGATTTAAAATCAGCTCAGCATAGTACT CAGTGAGTTGGCATATTCAAAATATACATCCTATAATTCAATTTGTTTCCCTGTAGAACTTTCTCATGCTATTTTCCTCT AGGGAGGAGCAATTTTAAAGTTCCTATTTTGCTTGAGGGGTTGAGATCAGGGTTTTAAATTGAGGTTGAGGAAGCGTTGC AGAATTGCAGACAAATTCTGGTTGATGAGGTCCCGTTGCGGAGACTCCAAAACCTTTTACGTTGCGGTTGCGGACCACAA TTTAAAACCTTGGTTGAGATTATTATTTTTCTTTCTGTAATCCAAATAATTTTAATTGAGTTTTGATGAATTTTCTGTCA TCTGCTGAGAATGTTCAGACAGTGTTAAACCTTTGCAGGCCTACATAAACTGGAAAGGAATGTCTTGTGCAAATTCATGT TCGAAGGGATAACATTGGTTGAATTTCAATTTCAAAATTTCTCTGCAACCTTATAATGGAAGACCACCTTTCCCCTAAGG GAAAAGGAATTGGTTATTCGGCATCGTTCGATGGTGGAATGAAAAATTCAGCTTCGGAGGACATGTTTAACAACATCTCC GAGCTCATGAACTTCGATACTTATGCTGGTTGGTGCAATAGCCCATCCATGACTGATCCGAATTTGGCTAACGGTCTTAC GCCATTTGTTTCGGTACCATACCCACCACCTGATGGATTGAATTTAGTGGAGCAGAGCAGTGGTCCCTTCTTTATGACAG AAGCCACTGGAAATTACAATGATATGCAAAGCTCGCCCAGTTATGGCGACAGAGTTGTATTACAGCAAATGGAAAACCAA TTTGAGTTCTTTGATGTTCTAAATGATACAAATAACTTAGATGCTAAACAAAAACAAAGTGTCCCATTTCAGCAACTTAA TACCTCAGATATGGGCAATCATATAATGTCCTGGTCATCTAGTTGGTCACTTGATGAGAGAATGCTGAAGGCTTTGTCCT TCTTTAAGGAATCAGCTGGTGGGGGAATATTGGCACAAGTCTGGGTACCCGTAAAGCATGGTGATGAATTCATCTTAAGC ACAAGTGAGCAACCCTATTTGCTAGATCATAAGCTTGCAGGGTATCGTGAAGTGTCAAGGACGTTTACATTTTCTGCAGA AGGAAAAGCAGGCTCTTGTCCTGGGCTTCCTGGTCGCGTGTTCACCTCCCATGTTCCTGAATGGACATCCAATGTTGGTT ACTACAATAAAACTGAGTACTCGCGGTTGGAGCATGCGATTAATCATGAGGTTCGGGGATCAATTGCTCTTCCTATATCC GATCCGGACTCTAAAGTGCCATGTAGTGCTGTCCTTGAACTTGTCACTACAAAGGAAAAGTCTAATTTTGACAGAGAATT GGAAATCGTTTCTCAGGCGCTCCAGGTTGGGTTTCCTTTAGCCACTTCCAACATATACTTCAATTTCTTGCATTTACCTG TCTTAGTGCTGCTTATTTCAAGTTTGTTGGCATATCTGTGTTACTCTATTTGAGACTCAGTTGTCATCTTGTGTCTCCAT TTGATGTCTTGTTACAAGGTTGTCATGGAGAAATTTCTATCTTGGATGACAAAGTATCTTATCAATGTATTTGATGTTGA TCTCAGTGTAGTTGAGGAGTAGTTATGCAAGCAGAAGATTTTGTGCATGGTGTAGTCATATTTCTTGTGATCAAACTAGG GTACTTTCCACAAATTGGAACAATAAGAATGGCATATACTGATCTGTTTCTAGTCAATAGTCATTCTGTATAGGCCCATT CTATACTCAATAGGATACAGTTATTTCAAAGGGCATCTTTATTCTTCAATTTATTTGATTCAAGAACCTCTTGATTTGCA TTATAATGTTTCAAAGACTAAATGCGTCTCAGTCAGTTATGGCTTTACTCTCCAATTACATATAAAAGTAACCTTTCTGT GTTATAGATATTTCCAGATTGTGTTATAATTAAAGTTAGTAATGATAAATGTATTATCATGATTTTCTGCAGCATGTACA TTTAAGGACTATTACGCCGCCACGACTTCTTCCTCAGGTACTTGCTGAATCCTGAATTTGCATTCTTCCTATTGATTTTC CTGATATTTGTTTCTATCTGGATTTCGGAACTTCTTACTAGGTTGATTCTTTTTCTGCAGTCTCTATCAAATAACAAAAG AGCTGCTTTATCTGAGATAATTGATGTGTTACGAGCTGTATGTCATGCCCATAGATTGCCACTGGCACTTACATGGATTC CCTGTTGTTACAGTGAGGGAATAGGAGATGAAACCGAGAGAATCCGAATTAAAGAAGGCCATATAAGTTCTAATGAAAAA TGTGTTCTATGTATTGAAGAATCAGCTTGCTATATAAATGATAAAATGGTAGGAGGATTTGTTCATGCATGCACTGAACA TCATCTCGAGGAAGGGCAAGGTATAGCTGGGAAAGCTCTTCAATCAAATCATCCATTCTTCTATCCCGATGTCAAGTCTT ATGATATCAGTGAATATCCCCTTGTTCATCATGCACGCAAATATAATTTGAATGCGGCAGTTGCAATTAGGCTAAGGAGT ACATATACTAATGATGATGATTACATATTAGAATTCTTTCTGCCTGTCAATATGACAGGGAGTTTAGAACAGCAACTTCT ATTAGACAATCTCTCAGGTACTATGCAGAGAATTTGTAAGAGTTTGAGGACCGTTTCAGATGCTGAATTAACAGGGATAG AAAGCTCCCAAGTTGGGTTTCAAAAGGAAAAAGTCCAAGGTATTTTTCCTATATCCGGTAGAAACTCTCAGACGGCATCA ATAGGTTGTGACTATGATTTGGACCGGAAGATGTACTTGAAGGCAACTAACCTGAGAAATAATGGAATCGAAGCTGCTAG AAGCCAGGTATATCTTGACTGTATCTTCTTCTTACCCTCATCTAATTTTATGATATGATTGCTTCATTTGAGGAAGCAGT TCTTGCAAGTTATTATGCATCCTGGAATGGAACCTGTGGGGGAAATTACCGAATATCCATCACACTTCATTTATGTTATA AAGGAGCGAACCCGTGGAGTGAAACATCTGATATAATTTGCTCTTCAACTTTGTAACTTCTTGGTTTAGTTTTTTTTAAT GTCTTTTGGCACTATAGTTTAACATCATAGTAAATTTATTTTTCAGGCAATTAATGGATCAAGAAAGCAGGTTGAGAAAA AGAGAAGTACAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGCAGTCTGAAGGATGCTGCGAAA AGCATTGGTGGTGAGCTTCCACATTATTTTTCCAAATTTCTTTATATTTATTAACAAATGATTATTTTGGGTTATATGAT GGATGTTTCATTGAAGATATTAAATATTTTTGAAAGGTCATTCTTGTTAATGAAGACAAATTCATCTCATTAACTAACAT TTCATACTGGAACAGTTTGCCCAACAACTCTTAAGAGGATATGCAGGCAACATGGAATTTCAAGATGGCCGTCCCGCAAG ATTAATAAAGTGAATCGTTCATTAAAGAAAATACAGATTGTGCTTGACTCTGTCCAAGGAATGGAAGGAGGGCTGAAGTT CGATCCTTGTACTGGGGGTTTTGTAGCAGGAGGATCAATCATCCAAGACATTAGTGCACATAAAAGTATTCTGTTCCCTG AGAGAAGTGCTGTGAAAGACACTGAGCCTGTAGTACGAGAAGTGGTCTCAGGAGTACCTCTAGCACCTGGTAGCCCAGGT GAGAACTCAGCCATTGAGTTGGAGGATGATGGTGTTTGTTCGGTTGGGAACCAGCTTGTGCACTCAACAAGTGTACTTAT GTCTAATTCCTATGAGGGCGAGTTGAAGATAGACAATGCTTCTTCTGCTGATGGTAGTGAAGATTCAAAATCAATGGCTG TGGATGATGTGACCAAGGCTCAGGACTGTCCTGAACAAAACTCTCTAGGTTCTGTTCTTGAAAAAGAGGGGGACCAATGG AGTTTGAACAAGTACGGTATGGGAGTAGAAAATTCCATCCATGATATTGTTTGTAATACTAATAGTTCAATCTCCTTGAT TGAACTTAGCGGCGATGGAGGAAATGGTGCTGATGAACATAACCACCCCACTTCTTCAAGCATGACAGACTCTTCCAATG GCTCTGGCTCAATGACGCTTGGCTGTTCATCAGGCTCCCAGAGCTTTGAGAATCAGAAGAAATCGAAAGCCAAATCAGCT TGTGTTGTTGATAGTGGGTCAAAAATGGTTGTCAAAGCTACCTATAGAGGAGACACTATCCGCTTCAAGTTTGATCCATC TGCAGGTTGTTTCCAGCTATATGAAGAAGTTGCAACAAGGTTCAAATTACAAAACGGGTCATTCCAGCTTCGATATCTAG ATGATGAAGAGGAATGGGTGATGATGGTGAATGACTCAGATTTGCAAGAATGTGTAGAAATTTTGGGTGATATTGGTGCA ACTTGTGTGAAGTTTCTTGTTCGCGACACGACCGGTGTTTTAAGGAGCCGTAGCAGTAATAGTTGCTTCTTGTCAGAGAG CTCATAGTAGATATCAGTATATGAGATGATGCATGGCTTCAATGCAACAGTTGAAGAGTTTCAACAATGTTTTGTTACTT ATACATTCGCGTGTGGGTTCTGCGTCACTCTGGATTCTAAAACCATGCTGGTTGGAGGAGGTGCCTTTTAGCCTACCTAT ACCAGATGCAAAACATCATTTCTATTGAAGATCTTGCAGGTGTTGTGTGGGGCCATTGAGTCAAATGTTGCTTGTAGTTC AATCTTCAAATAATAGAAGTTAAAGTATGGTCATGCTTCAAATAGGAGGTAGAATAGATAGTAGTAATAGCCTGTTAAAT ATATAGTTCTGTATATGGTAGATTAAAGCAGCATAGAAGCATATAGTTGCACAAAGGACTGGCCCAAATAGCTCTGGGTG CTTTAATCTCAGTTTGTATAGATTTCCCATCAGAAAATATGATCAAGTGTAAAAATTTCTGTAGAATTGAGTCCTTGGTT CTTTTTCCTTACAAAATAGTAGATAGTTAGAAACATGTACTGTGGAATTATAAGTTTCTCAAAAGGAAGATGTGATGTAA TTGGATAGATGAGTTTCAGCAACCATGGTTCTGTGTTTTCTAATGACCATGTTATGATAATGGTAAGGCTTAAAACAGTT AAATCAATTGTGTTTTGCAAATAATACTTAAGGCCTCATTTGGAAG
CDS sequence (LotjaGi3g1v0501000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGACCACCTTTCCCCTAAGGGAAAAGGAATTGGTTATTCGGCATCGTTCGATGGTGGAATGAAAAATTCAGCTTC GGAGGACATGTTTAACAACATCTCCGAGCTCATGAACTTCGATACTTATGCTGGTTGGTGCAATAGCCCATCCATGACTG ATCCGAATTTGGCTAACGGTCTTACGCCATTTGTTTCGGTACCATACCCACCACCTGATGGATTGAATTTAGTGGAGCAG AGCAGTGGTCCCTTCTTTATGACAGAAGCCACTGGAAATTACAATGATATGCAAAGCTCGCCCAGTTATGGCGACAGAGT TGTATTACAGCAAATGGAAAACCAATTTGAGTTCTTTGATGTTCTAAATGATACAAATAACTTAGATGCTAAACAAAAAC AAAGTGTCCCATTTCAGCAACTTAATACCTCAGATATGGGCAATCATATAATGTCCTGGTCATCTAGTTGGTCACTTGAT GAGAGAATGCTGAAGGCTTTGTCCTTCTTTAAGGAATCAGCTGGTGGGGGAATATTGGCACAAGTCTGGGTACCCGTAAA GCATGGTGATGAATTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCATAAGCTTGCAGGGTATCGTGAAGTGT CAAGGACGTTTACATTTTCTGCAGAAGGAAAAGCAGGCTCTTGTCCTGGGCTTCCTGGTCGCGTGTTCACCTCCCATGTT CCTGAATGGACATCCAATGTTGGTTACTACAATAAAACTGAGTACTCGCGGTTGGAGCATGCGATTAATCATGAGGTTCG GGGATCAATTGCTCTTCCTATATCCGATCCGGACTCTAAAGTGCCATGTAGTGCTGTCCTTGAACTTGTCACTACAAAGG AAAAGTCTAATTTTGACAGAGAATTGGAAATCGTTTCTCAGGCGCTCCAGCATGTACATTTAAGGACTATTACGCCGCCA CGACTTCTTCCTCAGTCTCTATCAAATAACAAAAGAGCTGCTTTATCTGAGATAATTGATGTGTTACGAGCTGTATGTCA TGCCCATAGATTGCCACTGGCACTTACATGGATTCCCTGTTGTTACAGTGAGGGAATAGGAGATGAAACCGAGAGAATCC GAATTAAAGAAGGCCATATAAGTTCTAATGAAAAATGTGTTCTATGTATTGAAGAATCAGCTTGCTATATAAATGATAAA ATGGTAGGAGGATTTGTTCATGCATGCACTGAACATCATCTCGAGGAAGGGCAAGGTATAGCTGGGAAAGCTCTTCAATC AAATCATCCATTCTTCTATCCCGATGTCAAGTCTTATGATATCAGTGAATATCCCCTTGTTCATCATGCACGCAAATATA ATTTGAATGCGGCAGTTGCAATTAGGCTAAGGAGTACATATACTAATGATGATGATTACATATTAGAATTCTTTCTGCCT GTCAATATGACAGGGAGTTTAGAACAGCAACTTCTATTAGACAATCTCTCAGGTACTATGCAGAGAATTTGTAAGAGTTT GAGGACCGTTTCAGATGCTGAATTAACAGGGATAGAAAGCTCCCAAGTTGGGTTTCAAAAGGAAAAAGTCCAAGGTATTT TTCCTATATCCGGTAGAAACTCTCAGACGGCATCAATAGGTTGTGACTATGATTTGGACCGGAAGATGTACTTGAAGGCA ACTAACCTGAGAAATAATGGAATCGAAGCTGCTAGAAGCCAGGCAATTAATGGATCAAGAAAGCAGGTTGAGAAAAAGAG AAGTACAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGCAGTCTGAAGGATGCTGCGAAAAGCA TTGGTGTTTGCCCAACAACTCTTAAGAGGATATGCAGGCAACATGGAATTTCAAGATGGCCGTCCCGCAAGATTAATAAA GTGAATCGTTCATTAAAGAAAATACAGATTGTGCTTGACTCTGTCCAAGGAATGGAAGGAGGGCTGAAGTTCGATCCTTG TACTGGGGGTTTTGTAGCAGGAGGATCAATCATCCAAGACATTAGTGCACATAAAAGTATTCTGTTCCCTGAGAGAAGTG CTGTGAAAGACACTGAGCCTGTAGTACGAGAAGTGGTCTCAGGAGTACCTCTAGCACCTGGTAGCCCAGGTGAGAACTCA GCCATTGAGTTGGAGGATGATGGTGTTTGTTCGGTTGGGAACCAGCTTGTGCACTCAACAAGTGTACTTATGTCTAATTC CTATGAGGGCGAGTTGAAGATAGACAATGCTTCTTCTGCTGATGGTAGTGAAGATTCAAAATCAATGGCTGTGGATGATG TGACCAAGGCTCAGGACTGTCCTGAACAAAACTCTCTAGGTTCTGTTCTTGAAAAAGAGGGGGACCAATGGAGTTTGAAC AAGTACGGTATGGGAGTAGAAAATTCCATCCATGATATTGTTTGTAATACTAATAGTTCAATCTCCTTGATTGAACTTAG CGGCGATGGAGGAAATGGTGCTGATGAACATAACCACCCCACTTCTTCAAGCATGACAGACTCTTCCAATGGCTCTGGCT CAATGACGCTTGGCTGTTCATCAGGCTCCCAGAGCTTTGAGAATCAGAAGAAATCGAAAGCCAAATCAGCTTGTGTTGTT GATAGTGGGTCAAAAATGGTTGTCAAAGCTACCTATAGAGGAGACACTATCCGCTTCAAGTTTGATCCATCTGCAGGTTG TTTCCAGCTATATGAAGAAGTTGCAACAAGGTTCAAATTACAAAACGGGTCATTCCAGCTTCGATATCTAGATGATGAAG AGGAATGGGTGATGATGGTGAATGACTCAGATTTGCAAGAATGTGTAGAAATTTTGGGTGATATTGGTGCAACTTGTGTG AAGTTTCTTGTTCGCGACACGACCGGTGTTTTAAGGAGCCGTAGCAGTAATAGTTGCTTCTTGTCAGAGAGCTCATAG
Protein sequence (LotjaGi3g1v0501000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDHLSPKGKGIGYSASFDGGMKNSASEDMFNNISELMNFDTYAGWCNSPSMTDPNLANGLTPFVSVPYPPPDGLNLVEQ SSGPFFMTEATGNYNDMQSSPSYGDRVVLQQMENQFEFFDVLNDTNNLDAKQKQSVPFQQLNTSDMGNHIMSWSSSWSLD ERMLKALSFFKESAGGGILAQVWVPVKHGDEFILSTSEQPYLLDHKLAGYREVSRTFTFSAEGKAGSCPGLPGRVFTSHV PEWTSNVGYYNKTEYSRLEHAINHEVRGSIALPISDPDSKVPCSAVLELVTTKEKSNFDRELEIVSQALQHVHLRTITPP RLLPQSLSNNKRAALSEIIDVLRAVCHAHRLPLALTWIPCCYSEGIGDETERIRIKEGHISSNEKCVLCIEESACYINDK MVGGFVHACTEHHLEEGQGIAGKALQSNHPFFYPDVKSYDISEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYILEFFLP VNMTGSLEQQLLLDNLSGTMQRICKSLRTVSDAELTGIESSQVGFQKEKVQGIFPISGRNSQTASIGCDYDLDRKMYLKA TNLRNNGIEAARSQAINGSRKQVEKKRSTVEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINK VNRSLKKIQIVLDSVQGMEGGLKFDPCTGGFVAGGSIIQDISAHKSILFPERSAVKDTEPVVREVVSGVPLAPGSPGENS AIELEDDGVCSVGNQLVHSTSVLMSNSYEGELKIDNASSADGSEDSKSMAVDDVTKAQDCPEQNSLGSVLEKEGDQWSLN KYGMGVENSIHDIVCNTNSSISLIELSGDGGNGADEHNHPTSSSMTDSSNGSGSMTLGCSSGSQSFENQKKSKAKSACVV DSGSKMVVKATYRGDTIRFKFDPSAGCFQLYEEVATRFKLQNGSFQLRYLDDEEEWVMMVNDSDLQECVEILGDIGATCV KFLVRDTTGVLRSRSSNSCFLSESS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 981 | 971 | 0.0 | – | |
| PANTHER | 11 | 981 | 971 | 0.0 | – | |
| ProSiteProfiles | 573 | 661 | 89 | 17.154 | ||
| Pfam | 593 | 641 | 49 | 2.8E-26 | ||
| MobiDBLite | 756 | 791 | 36 | - | – | |
| MobiDBLite | 827 | 862 | 36 | - | – | |
| MobiDBLite | 836 | 862 | 27 | - | – | |
| SUPERFAMILY | 879 | 969 | 91 | 3.11E-21 | – | |
| Gene3D | 883 | 964 | 82 | 8.5E-12 | – | |
| ProSiteProfiles | 885 | 967 | 83 | 19.389 | ||
| SMART | 885 | 967 | 83 | 1.3E-18 | ||
| Pfam | 887 | 966 | 80 | 2.2E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0501000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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