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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0026300 |
| Transcript ID | LotjaGi4g1v0026300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Stress up-regulated Nod 19 protein; TAIR: AT5G61820.1 stress up-regulated Nod 19 protein; Swiss-Prot: sp|P13952|CCNB_SPISO G2/mitotic-specific cyclin-B; TrEMBL-Plants: tr|Q64EX4|Q64EX4_PEA MtN19-like protein; Found in the gene: LotjaGi4g1v0026300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3206308..3211005) extracted from Lotus japonicus Gifu genome v1.2.
AATACAAAGAAATAATTTCATCTTTCTTTCCCTACTCCCTAGTGTGAAAAGCCAGAATGCATCGTTTTCCTTGAGTAAAG GTGTCACCGTCCTTTGGTCTATAAATTAATGCATTCACTTCTTTGTGACTGTCTGTCTCTCTATATCTCCAACCGTGTCA TTGTTCTCGCTTCGAGGTACACCATTGAAGCTATCTCCTTTTTTTTCATCATCATCATCATCATTCACAATTTTGAATAA CCCACATAGCATCCTTTGTGCATGCTTCTACCTCTCATGCTGGATTGAGTATTGGACTATATGTTGTTTCTGAATCAGTT TTTATTTATAGTCTTTGTCTGTTAAAGATGAGATGAGATGACCCAAATCTTCATTTGATGTTAAGACTTAAGTTTTTACT TTCCTCTTATGTTCATGTCCGTCCTTGCACAATACTCTATCCTTTTGCCTCACTTTTCCCCCTTTTTCCCATGCTAATTA TGAATATAAATATGATTAACAACAGATGCTGATTATAGCTTTTTTTCTTTATTTTTTTTGTTGGCCTTGAGTTTAGTATA AGATAATCATCTTCAAGGTTAAATTTTCATACTTTTTCATCCAGGATTTTCTAGTTTATTTGCCTAAATTCATACACAAA CATATATGCTATTGCCCTTGTTAACATTGTTCTGTAATCCTTGTTTGGCTAATCACTTTGTTGTCTTTATAGAGATTCTA GATTTCCATTTTTGGTCATTTCTGATTGCAGAATTTTCTCTTGTACTGTGTAGTTATATAGTGAATTTTAGGAAGATAGT GCCTTTTTTACAATCCAATAGCTCCTTTTTATCAGCTTCTCTTTTATCACAATCAATTTCATAAACCAGAAGCTATCCGC AGAAGTTTCTCTCCATAATTAATTTTGCCTGAATCAATGGTAGAATAATTTTCAAACATGCACGACATATGTTCCATGTA TTTTTTCAATCAATAGTTAGTTGATTACTGATAAAGAATTTGCTTACAGATCAACATGGGCTCGGTATCTAGAAATTTTG TACTTTCTTTGGCATTACTTCTGGCAACATGTTCAGGAATTTTGGGGAGAACTGAGAACAATATAAAAACAGCTGTTTTT CTGTCCCCAAAATTTGAACTTGGAGCAGGATCAGTTATCAATAGATATTACTATGGTATTGATTTTCCAAGAGGTCATAT AGCAATGAAGAGTTTCAATGCTGAAGTGATTGATGAAGCTGGGAACCCTGTGCCTCTCCATGAAACTTACCTTCACCATT GGGTTGTTGCAAGATACCATCAAAGTAAAAAACATGTGACAACACACACAGACAAAAGCTATGATAATGGACATCGAATG CTTCACGAGTCTGATGATTTTGTTATGGTGAGGAACAATGGCATATGCCAGAGGAATGTTCTTGGTCAGTATTATGGGCT TGGTTCTGAAACTAGAGGAACAGCTACACATATTCCAGACCCTTTTGGCATAGAAGTAGGAAACCCTGAAGAAATTCCAG AAGGGTATGAGGAGAAATGGTTGCTGAATGTCCACGCCATTGATACCCGTGGTGTTGAGGATAAGTTGGGGTGCACTGAG TGCAGGTGTGACCTTTATAATGTCACAAAGGATGAATATGACAGACCTTTGAGGCCAGATTATGTTGGAGGTTTGTTATG TTGCTATGACTATACACAGTGTAAATTGAGGGAAGGCTTTGAGGTTGAGAGCACAAGGAGAAGCCTCTACTTAAGATACA CAGTGAAATGGGTTGAGTGGGACAAATTTGTTGTGCCTGTTAAGATATACATACTTGATGTAACTGATACTTTGAAAATA TCAGATGATTCCAAAGGAGTAACCAGCTCAGATCATAATTGTGTGGTAAGTGAACTCATCAAGAAACACGTAGATTATCT CAATTTTTATTTAACTCCAAAACATAATAGTAGTAGTTCATTACTTTATTGGGTATAAGCAAGCAACAGAGATTTATTTG TTAATTGTTACAGGTTGAGTATGAAGTTGAACCTTGCAGCACAGACCATAAGGGTGGTAATGGTTGTCATCATGTAAAGA GGACAAGCCTCCCAATGCAAACTGGTGGTTATGTAATCTATGGTGTTGCACACCAGCATTCAGGGGGAATTGGCTCAACT CTTTATGGACAGGTGATGTTTATTCATTAGTTACATTCATTCTTAAATATTTGGCTAACTTCCCTTAGTTTTACACCTCG TTTTTCTTTAGTTTTTCTCTGTCATAGTTTCAACTGAGGATCACAAATGATTGTAGCTTCAACGTTTGCAAGTGTTAAAA TTGATTCTCCACTATCATAATCAAATTTTTGTGTTTGGATGTTTTCTTTCACAATTGATTCTACCTTCAAAACCAATTAT TGGATGAAGCTACAAATCCACAGTTCTGCAGTGGACTTAGTACATGTTTGTGTACACAGTGGAAAACCACGGTGAAGCCA AACTCAGGGTGAACAACCTCAAAAGCTAAGGCAACTAGGCAAGTTGCTTTTGTCCCCTGTGATTTTGGCTCACCGTGAAC AGGCACTTAATCAATTGCGGAAATATCACAGTTGGATCGCACAACATTACCCTACATAAATAAGTAAAATAACTGTTCTC GTAAATGTGTCCAACATAAATCAGTTCACTTTCAACTCATTTTGAGTACAATTAATTTTATAAAAATCAATTTTATCCAC AATCAATTCTGAGAACAATGATCTGAATGACACTTTAATTAGCAAGAAAATGATGAACTGATTGCTGGAAATTTATTACT AATTGCAACTTTTGCTTTCATTGCATACACTTTGAGCTTCTTACAAGCTGTTGAATGGTCACCCAAAAAGAAAACAAGGC AAAAGTTGTTGCCTTGTCTTGGAATTTGAAAGCTAATTGGTGGGGGTAGAAGCTATGTTGCTGTCTTCTTAAAGCTCAGC TTTTATGAAGACTATTACTTATTTTTCTTTATTTTTGGTACAGAGGGCAATAATTATAGACACTCCCCAAATCTATCTAT TAAACCCAATCCTAGTGGCTAAATATTGTAGTGCATCCTATGTTCTGAAATTTGTGCATGACATTTACAGGATGGGAGGG TTATATGTTCATCTATGCCAAGCTATGGAAGTGGAAAGGAAGCAGGAAATGAGGCAGGGTACATTGTAGGAATGTCCACT TGTTATCCTCAACCAGGTTCTGTCAAGGTATTTGATGGTGAAACTGTAACTCTGGAGTCTAACTACAGCAGCAGCCAGAG GCACAGTGGTGTTATGGGGCTATTCTACCTGTTGGTTGCAGAACAGCTACCACACCAACACTTCATACATTCCACTCGTT CTTCATTTTTTGTGGATGTAAAAAACATAATTTATTGATAGGTATGGTTAGTGTCATGCTAATATAAGCATAGTGTCATC GATGATATATATAAGCATAGTGTAATTGATGATATCTAAGTATAGAATCAAAAGAAATAAAGACAGGGCAGGGTAGGCAG TGGGCGCATACTAGTAGTCATATACAGTGGGCTCATACCGAAGGTATTCACAGAAGCTTATCCTCATATTTGATTCTGGA TTTAGAATCATTTGTGGAAGAATTTTCAAACATAATAGTAGTCATATGTAGTTTGTAATGTTTGCTTAAAATAGTCTTGT ATTTTGCTATTACACATAAGAGGCCAAGTTTTATTACATTCTTCTGAAAGAATTAACAAATGTGAGTTGCTAGTGTTACT GTTGTTGCTTCAAGCATCTTCTCTACTCGAACAAATTATTGTGTGGCGCTTGCCTAGCATGCAAAGGACCCTACCACCGG GGTGAAGAATGGTTGGTTTGGAAAAACACTTCATGGAAGGTTCCGTTTCTACTTTGGTCTTTCCATATATAACCGTAGTT TGTCCATAGCATGCATGTTTGGACAGGATCTTTTTCAAAAGTTTTTCCAATCTTTCAAAACCACTTTCTTTTTGGCCCTT GATGGGGACACTAAATAGCAATGTCAATCATACTCTTGGTGTAAACCTATTCTTTTTTTTAAATATATAGATAAATAAGA TTACTGAGCTATACATATGAATCGGATTTATATGTATGATCAGCTGCTAAAACTTACAAATTTCAGTTGCTTCCTTGTTG TGTATTTAATCATTGTAATCGATGACTGATATTAAATTAAGTTACAGTTCCTTTATCTCATTTTCTATCTTGGTATCATT ATCAAGAGTCCTAAGCTTTAATTTGAAGCCAATCATTCCATCCAACAAATTATGGATTTTGTAAGTTGCCAATTCAACAC AGAAAAACAACCTCACCTTCATGTGTTCTGTCAAGTTGGACAAAGAAGTGTAATGCCCTTAATCAGAGGAAGTAGACTTG ATGGATCCATTCATGGGACAAAGGTGTCTAGAGCAACAGAAGATTCCAATAAGGAAATGAACCCATCATATGAAGTGTCT AGAGCAATTCATCACACACTTCACAATCAAATTTGATGGTGTCTAGAGCAATTCATCACACACTTCACAATCAAATTTGA TGATCGACTTCCAATATTTATAACAAATTTCATGTTTTAGGGGAAAAAAAACAAATTATTCATTGAAGTTTGGGTCATGT GCGACTTAGCTCCTGATGTTTAAAAATGTGTATTTAACTCCTTAAAATTTTTAAAAGT
CDS sequence (LotjaGi4g1v0026300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTCGGTATCTAGAAATTTTGTACTTTCTTTGGCATTACTTCTGGCAACATGTTCAGGAATTTTGGGGAGAACTGA GAACAATATAAAAACAGCTGTTTTTCTGTCCCCAAAATTTGAACTTGGAGCAGGATCAGTTATCAATAGATATTACTATG GTATTGATTTTCCAAGAGGTCATATAGCAATGAAGAGTTTCAATGCTGAAGTGATTGATGAAGCTGGGAACCCTGTGCCT CTCCATGAAACTTACCTTCACCATTGGGTTGTTGCAAGATACCATCAAAGTAAAAAACATGTGACAACACACACAGACAA AAGCTATGATAATGGACATCGAATGCTTCACGAGTCTGATGATTTTGTTATGGTGAGGAACAATGGCATATGCCAGAGGA ATGTTCTTGGTCAGTATTATGGGCTTGGTTCTGAAACTAGAGGAACAGCTACACATATTCCAGACCCTTTTGGCATAGAA GTAGGAAACCCTGAAGAAATTCCAGAAGGGTATGAGGAGAAATGGTTGCTGAATGTCCACGCCATTGATACCCGTGGTGT TGAGGATAAGTTGGGGTGCACTGAGTGCAGGTGTGACCTTTATAATGTCACAAAGGATGAATATGACAGACCTTTGAGGC CAGATTATGTTGGAGGTTTGTTATGTTGCTATGACTATACACAGTGTAAATTGAGGGAAGGCTTTGAGGTTGAGAGCACA AGGAGAAGCCTCTACTTAAGATACACAGTGAAATGGGTTGAGTGGGACAAATTTGTTGTGCCTGTTAAGATATACATACT TGATGTAACTGATACTTTGAAAATATCAGATGATTCCAAAGGAGTAACCAGCTCAGATCATAATTGTGTGGTTGAGTATG AAGTTGAACCTTGCAGCACAGACCATAAGGGTGGTAATGGTTGTCATCATGTAAAGAGGACAAGCCTCCCAATGCAAACT GGTGGTTATGTAATCTATGGTGTTGCACACCAGCATTCAGGGGGAATTGGCTCAACTCTTTATGGACAGGATGGGAGGGT TATATGTTCATCTATGCCAAGCTATGGAAGTGGAAAGGAAGCAGGAAATGAGGCAGGGTACATTGTAGGAATGTCCACTT GTTATCCTCAACCAGGTTCTGTCAAGGTATTTGATGGTGAAACTGTAACTCTGGAGTCTAACTACAGCAGCAGCCAGAGG CACAGTGGTGTTATGGGGCTATTCTACCTGTTGGTTGCAGAACAGCTACCACACCAACACTTCATACATTCCACTCGTTC TTCATTTTTTGTGGATGTAAAAAACATAATTTATTGA
Protein sequence (LotjaGi4g1v0026300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSVSRNFVLSLALLLATCSGILGRTENNIKTAVFLSPKFELGAGSVINRYYYGIDFPRGHIAMKSFNAEVIDEAGNPVP LHETYLHHWVVARYHQSKKHVTTHTDKSYDNGHRMLHESDDFVMVRNNGICQRNVLGQYYGLGSETRGTATHIPDPFGIE VGNPEEIPEGYEEKWLLNVHAIDTRGVEDKLGCTECRCDLYNVTKDEYDRPLRPDYVGGLLCCYDYTQCKLREGFEVEST RRSLYLRYTVKWVEWDKFVVPVKIYILDVTDTLKISDDSKGVTSSDHNCVVEYEVEPCSTDHKGGNGCHHVKRTSLPMQT GGYVIYGVAHQHSGGIGSTLYGQDGRVICSSMPSYGSGKEAGNEAGYIVGMSTCYPQPGSVKVFDGETVTLESNYSSSQR HSGVMGLFYLLVAEQLPHQHFIHSTRSSFFVDVKNIIY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 421 | 421 | 3.5E-208 | ||
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 438 | 414 | - | – | |
| Pfam | 28 | 415 | 388 | 5.4E-192 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0026300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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