Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0055300 |
Transcript ID | LotjaGi4g1v0055300.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Monothiol glutaredoxin-related; TAIR: AT4G04950.1 thioredoxin family protein; Swiss-Prot: sp|Q9ZPH2|GRS17_ARATH Monothiol glutaredoxin-S17; TrEMBL-Plants: tr|G7ZZ90|G7ZZ90_MEDTR Monothiol glutaredoxin-S17 protein; Found in the gene: LotjaGi4g1v0055300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:6664034..6667789) extracted from Lotus japonicus Gifu genome v1.2.
CTTCGACGTATGAGGATGTGAGAGTTAAACTCGAAACCTTAAGCTAGTCGTGTCAACCTAGTTTAATATTTTATATCATA TAATAATATTCTATTCTTTTTACTATATTTTGGATCAGGGTTAGGGTTTGTTTGTTTGCATTATTATTTCATTCATTCAT CGATTTCGACAGTGTGTGAGACTCCGAAGCAGAATGGGTGGTTCAGTGAGAGACGTGAAGTCAAAGGCGGAGCTCGATGA GGTGGTGCACGGTGGCGCCGCCGTGGCGCTTCACTTCTGGGCATCATGGTGTGAAGCTTCCAAACACATGGATAAAATCT TCTCTCACTTGTCAACTGATTTCCCTCATGCTCACTTCCTTAGGGTAACGCTTCGCTTCCCTTAATTGATTACCCTCCTT TTCGTTTTTGATGTTTTGCTTCAATTTTTCATGATTTTGCAGGTTGAAGCTGAAGAACAGCCTGAGATTTCTGAGGCTTA TTCGGTTTCTGCTGTTCCTTTCTTTGTCTTCTGCAAGGTATGCTTCCTTATTTCTATTTTCTTTTTCAATTTTTAATCTT TTGCTGTAAAGTTTAATTTGCAAAACAAGTATTTGATGTTGTTTATGTGCATAAGAATGAAAATTATATAGATATATGTT GTATTTTACAATTTTTGTTTACCTATAGTTTATTGAACTTTAATTCTATTAAGGTTGAAGAGGCAGCAATAATTAGATAA TGATAGTATTTAATTATATCTATAACCAATCGTCTGTTGAAGTTGTTCAGCACTTCGTCCCTTAAGCAAGTGGTTTGGGG TTCGATTCCCAACTCTTGTGAATGGAAAAAAAACTTTGGCCAGCCCCCTACCGGTTAGTGTGCTGACCGTGGGGCGAGGG ATTTGTCTCACAGCTATTGGCTGTGGGGATACCTTGGCTAAGACAAATTTTTTTTATAGAATATAGATTCTCTATTTTGA TTTGAGATTTGTGTAGTTTATACTAATAATTGTAGCCATCTTGTGTCCTTCAATTTTTAAAAATTTTGTATCCCTGTGTT CATCTAATGTCGTGTCTGTGCCAATAGTTTACTGTTCCTTGTATCATCATCTACTGTTTAGTGTTTGCTGTTGTAGTAAA TTTTAGTGGTTAATCAGTGTCAATTCCAAATTAAATGGCAGAATGACTTAGTAGTTAATAAAACCATGTCCTGGGGGAAG TATATGTCGTGTATATTTCAAGGTGTTAAGGCTCTCCTGCCTGCCTGGTACCTCTGCCAAGAAAATGCTGGATTGTTTTT AAGTTTGTTCCACCATTGCTTGTTCTGTGTATGTATTAGGTTCATTTTTACATACCGCCAATGACAGCAGTTCTGTTATT ATATCTGGTGAGCAATAGAGTACAGTTTGTGGGTCTTGTATCTGGTTGACAATAGAGTATATTGTTTGTACGTAGTTCTT GTATCTGGCTGGACAACAGAGAATAATTTGTGGTAGCGTGGTTGATGTTTTGTTTTTGGTTGAGTTATATGGGGTTTGGG GGAGGGCTATTACTTCAAACTTGCCTCATCACTAATGGTGAGTTAGCCCAAAGGCCTATCTCTTAAATGTATGAGGTTGT TGTTGACTGCATAGTGGAGTCCATTCAGCATCTGAAATGAATGGTATTTTCATAAATAGGCATTTGGAGGAGTAAGCCCC ATATTCTGTCTTGGTTACCTGGAGTGAAGTGGCTGTGGCTTTGATGTTTGACCGCTTACAGAAAAAAAATCATAAAATAA AAAGGGTGTGACAGGTCTATTATTCTATTGGTCTTTAGTCTTCACTCAATTTTAGGGAAAATATCTTATCTGCACAAAGA TTGAGCCTTTTTTATGTTGTAAAGTATCCACATACATTCTCATATTGTACTTTGGTAATGTCTCCAATCATTTCTTTTAA TGAGACTATTTATTCATTGCATGATCATTTGCTGCATTGGAATAGCGAGACTTCCTTTGTCTGCAGTCAAGACAACTGGA TATAAACACTAAACTAAACTGGATTTATAACTTATCGGAGTTATTTGTTCTTTATCTAAGCTTTTGCAGGTTTATTATTC AGACTCGGTTTCGATATTTTTCTTCCTTTTTATTATCAAAATTTCTCCATTGCACAAAAGAGTATCTTTGTTGTATTGCC TATGATGATGATTCAACCTGTCATTTGGGGTTAAAATGTCACTTTTTACCTTATTTTCTTGATTTTATAGTTGATTAGTA GTCATTATTTTTCAGGATGGCAAGACCGTTGATACCTTGGAGGGAGCTGATCCTTCAAGTTTAGCAAATAAGGTTGCTAA AGTAGCAGGCTCAGTTAACCCTGGTGAAGCTGCATCTCCTGCCAGTCTTGGAATGGCTGCAGGATCTGCTGTTCTTGAAA CAGTGAAAGAATTTGCAAAAGATTCGAAGGAAAAAAGTCAAGTTCAAGTTGGTCAAAGTACTCCTCTAAAAAAGCGATTG CAGCAGCTTATTGACTCCCATCCTATCATGCTTTTCATGAAAGGAAGTCCTGAAGAGCCACAATGCGGATTTAGCAGAAA AGTTGTTGATGTTTTGAAGAAAGAAAAGGTCAAATTTGGAAGTTTCGATATCCTGTCAGATTTAGAGGTTCGTGATGGCA TAAAGAAGTTTTCTAACTGGCCTACGTTCCCTCAGCTTTACTGCAAAGGAGAACTTCTTGGTGGGTGTGACATAGCAATT GCTATGCATGAGAGTGGAGAATTACATGAGGTTTTCAAAGATCATGGGATTGATACCGTTGATGAAACACAAGTATCAGA TTCAGGAAATGCCAAGGGTGGCATTTCTAAATCTACTGATCTGAGTACAACCTTAACCTCTCGGCTGGAGAGCCTGGTAA ACTCAAGCCCGGTGATGCTGTTTATGAAGGGAAAACCAGATGAACCGAAGTGTGGTTTCAGTAGGAAGGTAGTTGAAATT CTTCAGCAAGAGAGCGTTCCTTTTAACAGTTTCGACATTCTTACTGATGAAGAAGTTCGTCAAGGACTCAAGGTTTATTC AAACTGGTCTAGTTATCCTCAACTATATATCAAGGGGGAGCTTATTGGCGGATCAGACATTGTGTTGGAGATGCAAAAAA GCGGAGAACTTCAGAAGATTTTACATGAGAAAGGGATACTTCCAAAGGAGACCATTCAAGATCGTCTGAAGAAATTGATT GCCTCTTCCCCTGTGATGCTCTTCATGAAGGGTACCCCAGATGCTCCAAGATGTGGTTTTAGTTCCAGAGTTGTAGGTGC CCTTCAAGAGGAGGGTGTGGATTTTGGCCACTTTGATATACTGACTGATGACGAGGTGAGACAGGGATTGAAGACATTCT CAAACTGGCCTACCTTTCCTCAGCTCTATTACAAAAGTGAGCTGATAGGTGGTTGCGATATTGTGATGGAGCTGCGAAAT AACGGGGAGCTGAAGTCGACTTTATCTGAGTAGTTTTGTTATTATTCCATAAAATAACTGGGGTTGTATCTTTGAAGCCA TTTTGGCTGTGTGTATTGGAATTTGGAAAGAGTCTGATGATACTATACATGACCATTTTCGACCTGGTGTCAGGGAGGTT GTGTTGTTCGACATTATGATGTTCTATTTATATATCACCTGATTAGAGGCTAGTTTTCAGTGTTTGCAAATTTTTATCCC CTTTTGCACCTATCTGTGGCAGTGTGATAGCATATTTGAATAAGCTTTTATTTTTTTAGAATAAGTTCTGTCTAAA
CDS sequence (LotjaGi4g1v0055300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGTTCAGTGAGAGACGTGAAGTCAAAGGCGGAGCTCGATGAGGTGGTGCACGGTGGCGCCGCCGTGGCGCTTCA CTTCTGGGCATCATGGTGTGAAGCTTCCAAACACATGGATAAAATCTTCTCTCACTTGTCAACTGATTTCCCTCATGCTC ACTTCCTTAGGGTTGAAGCTGAAGAACAGCCTGAGATTTCTGAGGCTTATTCGGTTTCTGCTGTTCCTTTCTTTGTCTTC TGCAAGGATGGCAAGACCGTTGATACCTTGGAGGGAGCTGATCCTTCAAGTTTAGCAAATAAGGTTGCTAAAGTAGCAGG CTCAGTTAACCCTGGTGAAGCTGCATCTCCTGCCAGTCTTGGAATGGCTGCAGGATCTGCTGTTCTTGAAACAGTGAAAG AATTTGCAAAAGATTCGAAGGAAAAAAGTCAAGTTCAAGTTGGTCAAAGTACTCCTCTAAAAAAGCGATTGCAGCAGCTT ATTGACTCCCATCCTATCATGCTTTTCATGAAAGGAAGTCCTGAAGAGCCACAATGCGGATTTAGCAGAAAAGTTGTTGA TGTTTTGAAGAAAGAAAAGGTCAAATTTGGAAGTTTCGATATCCTGTCAGATTTAGAGGTTCGTGATGGCATAAAGAAGT TTTCTAACTGGCCTACGTTCCCTCAGCTTTACTGCAAAGGAGAACTTCTTGGTGGGTGTGACATAGCAATTGCTATGCAT GAGAGTGGAGAATTACATGAGGTTTTCAAAGATCATGGGATTGATACCGTTGATGAAACACAAGTATCAGATTCAGGAAA TGCCAAGGGTGGCATTTCTAAATCTACTGATCTGAGTACAACCTTAACCTCTCGGCTGGAGAGCCTGGTAAACTCAAGCC CGGTGATGCTGTTTATGAAGGGAAAACCAGATGAACCGAAGTGTGGTTTCAGTAGGAAGGTAGTTGAAATTCTTCAGCAA GAGAGCGTTCCTTTTAACAGTTTCGACATTCTTACTGATGAAGAAGTTCGTCAAGGACTCAAGGTTTATTCAAACTGGTC TAGTTATCCTCAACTATATATCAAGGGGGAGCTTATTGGCGGATCAGACATTGTGTTGGAGATGCAAAAAAGCGGAGAAC TTCAGAAGATTTTACATGAGAAAGGGATACTTCCAAAGGAGACCATTCAAGATCGTCTGAAGAAATTGATTGCCTCTTCC CCTGTGATGCTCTTCATGAAGGGTACCCCAGATGCTCCAAGATGTGGTTTTAGTTCCAGAGTTGTAGGTGCCCTTCAAGA GGAGGGTGTGGATTTTGGCCACTTTGATATACTGACTGATGACGAGGTGAGACAGGGATTGAAGACATTCTCAAACTGGC CTACCTTTCCTCAGCTCTATTACAAAAGTGAGCTGATAGGTGGTTGCGATATTGTGATGGAGCTGCGAAATAACGGGGAG CTGAAGTCGACTTTATCTGAGTAG
Protein sequence (LotjaGi4g1v0055300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGSVRDVKSKAELDEVVHGGAAVALHFWASWCEASKHMDKIFSHLSTDFPHAHFLRVEAEEQPEISEAYSVSAVPFFVF CKDGKTVDTLEGADPSSLANKVAKVAGSVNPGEAASPASLGMAAGSAVLETVKEFAKDSKEKSQVQVGQSTPLKKRLQQL IDSHPIMLFMKGSPEEPQCGFSRKVVDVLKKEKVKFGSFDILSDLEVRDGIKKFSNWPTFPQLYCKGELLGGCDIAIAMH ESGELHEVFKDHGIDTVDETQVSDSGNAKGGISKSTDLSTTLTSRLESLVNSSPVMLFMKGKPDEPKCGFSRKVVEILQQ ESVPFNSFDILTDEEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLEMQKSGELQKILHEKGILPKETIQDRLKKLIASS PVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNWPTFPQLYYKSELIGGCDIVMELRNNGE LKSTLSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
ProSiteProfiles | 1 | 107 | 107 | 9.332 | ||
SUPERFAMILY | 2 | 102 | 101 | 5.09E-24 | ||
Gene3D | 2 | 112 | 111 | 2.3E-25 | ||
PANTHER | 5 | 144 | 140 | 2.5E-210 | ||
PANTHER | 5 | 144 | 140 | 2.5E-210 | – | |
CDD | 10 | 103 | 94 | 1.11811E-34 | – | |
Pfam | 11 | 103 | 93 | 2.2E-13 | ||
PANTHER | 129 | 250 | 122 | 2.5E-210 | – | |
PANTHER | 129 | 250 | 122 | 2.5E-210 | ||
SUPERFAMILY | 153 | 254 | 102 | 2.83E-31 | ||
ProSiteProfiles | 154 | 256 | 103 | 25.015 | ||
TIGRFAM | 154 | 250 | 97 | 1.6E-38 | ||
Gene3D | 156 | 251 | 96 | 4.6E-35 | ||
CDD | 157 | 245 | 89 | 1.62474E-55 | ||
Pfam | 166 | 229 | 64 | 8.8E-16 | ||
PANTHER | 273 | 380 | 108 | 2.5E-210 | ||
PANTHER | 273 | 380 | 108 | 2.5E-210 | – | |
ProSiteProfiles | 283 | 385 | 103 | 25.423 | ||
SUPERFAMILY | 283 | 383 | 101 | 5.21E-31 | ||
TIGRFAM | 284 | 379 | 96 | 3.2E-37 | ||
Gene3D | 285 | 380 | 96 | 1.3E-36 | ||
CDD | 286 | 375 | 90 | 2.11902E-55 | ||
Pfam | 295 | 359 | 65 | 9.2E-16 | ||
PANTHER | 388 | 487 | 100 | 2.5E-210 | ||
PANTHER | 388 | 487 | 100 | 2.5E-210 | – | |
SUPERFAMILY | 389 | 486 | 98 | 9.74E-31 | ||
TIGRFAM | 390 | 486 | 97 | 6.0E-39 | ||
ProSiteProfiles | 390 | 487 | 98 | 24.939 | ||
Gene3D | 392 | 487 | 96 | 1.5E-34 | ||
CDD | 393 | 482 | 90 | 1.09165E-56 | ||
Pfam | 402 | 466 | 65 | 6.0E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
Molecular function | Protein disulfide oxidoreductase activity | Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds. | ||
Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi4g1v0055300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…