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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PF00085
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 128 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 0.028s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0049079.2
n.a. PREDICTED: NADPH-dependent thioredoxin reductase 3-like [Cicer arietinum] gi|502166343|ref|XP_004513864.1| chr0 16575249 16582924 +
2 domain predictions
1 GO term
Lj0g3v0095619.1
n.a. chloroplast thioredoxin M-type [Arachis hypogaea] gi|83776783|gb|ABC46707.1| chr0 40257156 40258577 -
2 domain predictions
1 GO term
Lj0g3v0106609.1
n.a. PREDICTED: thioredoxin-like protein CITRX, chloroplastic-like [Glycine max] gi|356508306|ref|XP_003522899.1| chr0 45857291 45858203 +
2 domain predictions
1 GO term
Lj0g3v0112529.1
n.a. PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Cicer arietinum] gi|502107053|ref|XP_004493141.1| chr0 49033783 49035300 -
2 domain predictions
1 GO term
Lj0g3v0115009.1
n.a. PREDICTED: 5'-adenylylsulfate reductase-like 5-like [Cicer arietinum] gi|502092034|ref|XP_004489697.1| chr0 50493419 50495779 -
2 domain predictions
1 GO term
Lj0g3v0123979.1
n.a. PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Glycine max] gi|356508541|ref|XP_003523014.1| chr0 55625284 55627349 +
2 domain predictions
1 GO term
Lj0g3v0128609.1
n.a. Thiol:disulfide interchange protein txlA-like protein [Medicago truncatula] gi|357440993|ref|XP_003590774.1| chr0 58103326 58106367 +
2 domain predictions
1 GO term
Lj0g3v0134189.1
n.a. Small glutamine-rich tetratricopeptide repeat-containing protein [Medicago truncatula] gi|357489549|ref|XP_003615062.1| chr0 61446624 61450396 -
2 domain predictions
1 GO term
Lj0g3v0168809.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357452667|ref|XP_003596610.1| chr0 80618605 80620096 -
2 domain predictions
1 GO term
Lj0g3v0208169.2
n.a. PREDICTED: 5'-adenylylsulfate reductase-like 4-like isoform X1 [Cicer arietinum] gi|502130376|ref|XP_004500630.1| chr0 104184636 104186512 +
2 domain predictions
1 GO term
Lj0g3v0282949.1
n.a. PREDICTED: thioredoxin M4, chloroplastic-like isoform X1 [Cicer arietinum] gi|502167294|ref|XP_004514101.1| chr0 146631933 146634156 +
2 domain predictions
1 GO term
Lj0g3v0283349.1
n.a. PREDICTED: protein disulfide-isomerase 5-1-like isoform 1 [Cucumis sativus] gi|449463657|ref|XP_004149548.1| chr0 146895992 146902258 -
2 domain predictions
1 GO term
Lj0g3v0283349.2
n.a. PREDICTED: protein disulfide-isomerase 5-1 [Vitis vinifera] gi|359479048|ref|XP_002264005.2| chr0 146896762 146898238 -
2 domain predictions
1 GO term
Lj0g3v0286769.1
n.a. PREDICTED: thioredoxin M4, chloroplastic-like [Glycine max] gi|356546877|ref|XP_003541848.1| chr0 149007895 149010722 -
2 domain predictions
1 GO term
Lj0g3v0354019.1
n.a. Os10g0485100 [Oryza sativa Japonica Group] gi|115482602|ref|NP_001064894.1| chr0 186424380 186430641 +
2 domain predictions
1 GO term
Lj1g3v0841310.1
n.a. protein disulfide isomerase-like protein precursor [Glycine max] gi|351722359|ref|NP_001238009.1| chr1 10855147 10858846 +
2 domain predictions
1 GO term
Lj1g3v1442770.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357443639|ref|XP_003592097.1| chr1 17359949 17362192 -
2 domain predictions
1 GO term
Lj1g3v1650140.1
n.a. PREDICTED: thioredoxin-like 4, chloroplastic-like isoform X1 [Cicer arietinum] gi|502132867|ref|XP_004501566.1| chr1 19781299 19783319 +
2 domain predictions
1 GO term
Lj1g3v2533790.1
n.a. Thioredoxin H-type 9 [Medicago truncatula] gi|357477627|ref|XP_003609099.1| chr1 29039310 29042998 -
2 domain predictions
1 GO term
Lj1g3v2534950.1
n.a. PREDICTED: thioredoxin H9-like isoform X1 [Cicer arietinum] gi|502155500|ref|XP_004510093.1| chr1 29093658 29097816 -
2 domain predictions
1 GO term
Lj1g3v2838090.1
n.a. Thioredoxin [Medicago truncatula] gi|357507807|ref|XP_003624192.1| chr1 32262431 32266583 +
2 domain predictions
1 GO term
Lj1g3v2941830.1
n.a. thioredoxin [Arabidopsis thaliana] gi|21595244|gb|AAM66084.1| chr1 33366005 33367039 -
2 domain predictions
1 GO term
Lj1g3v3975280.1
n.a. PREDICTED: 5'-adenylylsulfate reductase-like 5-like [Glycine max] gi|356571719|ref|XP_003554021.1| chr1 46792239 46796547 -
2 domain predictions
1 GO term
Lj1g3v4360080.1
n.a. PREDICTED: thioredoxin-like 3-1, chloroplastic-like isoform 2 [Glycine max] gi|356572122|ref|XP_003554219.1| chr1 51170004 51171708 +
2 domain predictions
1 GO term
Lj1g3v4779530.1
n.a. PREDICTED: probable protein disulfide-isomerase A6-like isoform 1 [Glycine max] gi|356505777|ref|XP_003521666.1| chr1 57622391 57626321 -
2 domain predictions
1 GO term
Lj2g3v0912040.1
n.a. PREDICTED: thioredoxin-like 2, chloroplastic-like [Glycine max] gi|356497145|ref|XP_003517423.1| chr2 13989270 13994185 -
2 domain predictions
1 GO term
Lj2g3v0912040.2
n.a. PREDICTED: thioredoxin-like 2, chloroplastic-like [Glycine max] gi|356497145|ref|XP_003517423.1| chr2 13989270 13993138 -
2 domain predictions
1 GO term
Lj2g3v1349230.1
n.a. PREDICTED: thioredoxin H2-like [Cicer arietinum] gi|502093505|ref|XP_004489966.1| chr2 21203137 21203912 +
2 domain predictions
1 GO term
Lj2g3v1349340.1
n.a. PREDICTED: thioredoxin H7-like [Glycine max] gi|356498146|ref|XP_003517914.1| chr2 21225130 21226105 +
2 domain predictions
1 GO term
Lj2g3v1349350.1
n.a. PREDICTED: thioredoxin H2-like [Glycine max] gi|356567572|ref|XP_003551992.1| chr2 21229192 21230729 +
2 domain predictions
1 GO term
Lj2g3v1728790.1
n.a. PREDICTED: thioredoxin H-type-like [Cicer arietinum] gi|502161222|ref|XP_004512082.1| chr2 26540356 26542444 -
2 domain predictions
1 GO term
Lj2g3v1828810.1
n.a. PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like [Cicer arietinum] gi|502161022|ref|XP_004511987.1| chr2 27602539 27604319 +
2 domain predictions
1 GO term
Lj2g3v2866110.1
n.a. protein disulfide isomerse like protein precursor [Glycine max] gi|351725315|ref|NP_001236576.1| chr2 37330426 37335848 -
2 domain predictions
1 GO term
Lj3g3v0235110.1
n.a. protein disulfide isomerase L-3b [Glycine max] gi|255291798|dbj|BAH89252.1| chr3 1415030 1420698 -
2 domain predictions
1 GO term
Lj3g3v0428420.1
n.a. PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine max] gi|356544082|ref|XP_003540484.1| chr3 3919561 3923259 -
2 domain predictions
1 GO term
Lj3g3v1010870.1
n.a. PREDICTED: protein disulfide-isomerase 5-4-like [Glycine max] gi|356517290|ref|XP_003527321.1| chr3 13361277 13370404 +
2 domain predictions
1 GO term
Lj3g3v1012190.1
n.a. n.a. chr3 13527398 13530546 +
2 domain predictions
1 GO term
Lj3g3v1012200.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357474835|ref|XP_003607703.1| chr3 13527999 13530429 -
2 domain predictions
1 GO term
Lj3g3v1061300.1
n.a. PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cicer arietinum] gi|502089840|ref|XP_004489036.1| chr3 14154310 14158131 +
2 domain predictions
1 GO term
Lj3g3v1061300.2
n.a. PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cicer arietinum] gi|502089840|ref|XP_004489036.1| chr3 14155144 14158131 +
2 domain predictions
1 GO term
Lj3g3v1061300.3
n.a. PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cicer arietinum] gi|502089840|ref|XP_004489036.1| chr3 14155762 14158131 +
2 domain predictions
1 GO term
Lj3g3v2849010.1
n.a. PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Cicer arietinum] gi|502082429|ref|XP_004487164.1| chr3 35164313 35169883 +
2 domain predictions
1 GO term
Lj3g3v2849010.2
n.a. PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Cicer arietinum] gi|502082429|ref|XP_004487164.1| chr3 35164313 35169883 +
2 domain predictions
1 GO term
Lj3g3v2849010.3
n.a. PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Cicer arietinum] gi|502082429|ref|XP_004487164.1| chr3 35164313 35167845 +
2 domain predictions
1 GO term
Lj3g3v3085830.1
n.a. Protein disulfide isomerase L-2 [Medicago truncatula] gi|357472209|ref|XP_003606389.1| chr3 38703166 38709100 +
2 domain predictions
1 GO term
Lj3g3v3085830.2
n.a. Protein disulfide isomerase L-2 [Medicago truncatula] gi|357472209|ref|XP_003606389.1| chr3 38706296 38709100 +
2 domain predictions
1 GO term
Lj4g3v0149340.1
n.a. PREDICTED: 5'-adenylylsulfate reductase 3, chloroplastic-like [Glycine max] gi|356521997|ref|XP_003529636.1| chr4 1557709 1559903 -
2 domain predictions
1 GO term
Lj4g3v0230910.1
n.a. PREDICTED: thioredoxin O1, mitochondrial-like [Glycine max] gi|356512209|ref|XP_003524813.1| chr4 2840660 2843743 -
2 domain predictions
1 GO term
Lj4g3v0451090.1
n.a. PREDICTED: monothiol glutaredoxin-S17-like [Glycine max] gi|356548735|ref|XP_003542755.1| chr4 6588933 6591709 -
2 domain predictions
1 GO term
Lj4g3v0619960.1
n.a. PREDICTED: thioredoxin M3, chloroplastic-like [Cicer arietinum] gi|502143143|ref|XP_004505233.1| chr4 9377746 9380480 +
2 domain predictions
1 GO term