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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0061600 |
| Transcript ID | LotjaGi4g1v0061600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphate translocator; TAIR: AT5G46110.1 Glucose-6-phosphate/phosphate translocator-like protein; Swiss-Prot: sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic; TrEMBL-Plants: tr|I1M068|I1M068_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0061600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:7479344..7483976) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGTCGCGAGTGTTGTCACGCGCCACCGCCCTCCCTCACCTCCGCAGGCTACCGCGTGAGTCCGTCTCCAGTAATGC CTCCCTCGTCTCCGTCAGAGCGATCGGGTCCGTTGCCGACGGCGGGAACCTCATCTGGGGGAGGCAGCTGCGTCCAGAGC TTTGCTCACCGGCGCTAAAGAAGGATGCTGTTCTGCTCCGTCCTTGCCTCGCCGCCGCCTCCTCGCCGGCTGGTGGTAGC GATTCCGCCGGGTGAGGTCCGTTTCCTCCGTTCTGACTCGGTGAACTCGGAGGCGTCACTGTCATAACTAATGTTTTTGC TGTTGTTTTTTGTTTTCAGGGAAGCGAAGGTTGCTCCGGTTGGGTTCTTTGCGAAGTACCCGGCTCTTGTCACCGGATTT TTCTTCTTCACATGGTAGGTCACGTGATCTGTTACTGTTGATAACAACCTGTAACTGTGTTGTGTAGTGTTCTGTTGTGT GTCTTTCCATTCCTTTTCTTTGCTAAGCTAGTTACTAGTTACTACAACTTTGAATTAACTGAGTTGATGTACTGGTTCAA CACTTCGTTCCTTAACCAAGTAGTGAGTTGAGGTTCGAATCTCAACTGTTGCGAATAGAAAAAACTCATTGGTTAGTCTT CAATAGCTTAATCTGTTGACAGTGAAGCCATGTACTTGTCTCATGACTATCGATCGTGAGATACGTGATTAAAACCTAAA AAAAGTTACTACCCTTTTGCACGAGGATAAAGTGATCTTTGGTTTACTTTACTGCTGTGTGTGGTTGTGGCTTGTGAATT GTGATCGCTTTGAGTTTCTGAAATTACTTTTTTGCCCTTTTTATGCAGGTACTTCTTGAATGTGATTTTCAACATCCTCA ACAAGAAGATCTACAATTACTTTCCCTATCCTTAGTAAGTTTCTGCAGTTTTATATCTTCAACTTCGTGGACTTTGCCTG TGGATTTCATGCTTCAATTGGGGGTTTCCTCCTATTAAAATGTTGTCAATTACAATAACAACTTAACAAGTGAATAAGTT AGTATAGTATTGCATAATTGTGTAAACAAAAAAAATATTGCATAAATGAAGCATGATTCTAGACTTTTTTTTTTTATGAG AGAAGATTCTAGATTACTTTATTCTTACACATGTTGTACAGTTGTAGGAAAAGGACACAATGGAATAATAGATGAGGTCC TGTAACTTTTGTTATTGATTCGTTTATTCAGTTCTTTATTTATATATAAGTTTAAATGTAGAGTTTAATAATTAAATGTT GACATGTAAATAAGTTTAAAAAAGTGTTGGACTATGCTTGAATTTTAATTAAGCTATATTTAAATAATAATAAAATTCCG ATTTAATTAATAATTAATTTTTAGTCTTAATTTTGGTTAGTTGTGGTTTATTTTCAGCTTTGTGTCGGTTATCCATTTGT TTGTGGGTGTGGTGTACTGTTTGGTGAGCTGGACCGTGGGCCTCCCTAAGCGCGCGGTAAGTTAAATTCAACATCTCACA GCCCAGCCCAATTTCTAATTGCTCTTTGCCCAAAAAAAAATTAATTGATGCTTAACAACTTTTCTGATTGACCCTGGTTA ACAAATTACAATTTTACATGAATGAACATGTTGGGACACTATTCTAAAGATGAATTTGAACATTTTAATAAAAAAATGCT AATTACAAACTTTCTCATGAATGCTCGATATATGTGGTACATACATATACTGATTTGTTTATGCCATGTTGCTGTTGTCT CTGTAGCCTATAGACTCCAACCAGCTGAAATTGCTCATTCCTGTGGCTGTGTGTCATGCACTAGGCCATGTCACCAGCAA TGTCTCGTTTGCCGCAGTTGCTGTTTCTTTCACACATACTGTTAAAGGTGATACTTAAAGTTATGATTATGTGCATGTTT GAATACACAATGGAAAAATAGAATGAAGTCAAAATTATGGTGGACAATTACAAAAGTTAATGGACGTTGCTTTTGTCCAC CGTAACTTTTGCTTAGTGTGATTTTTCACGGTGTACTCGAAGGTGCACTATATATAGTTGAAAACTGTATCTACTATCTA ACATTGATAAAATTGTGTTTCAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGCCAATCAATTC CCATCACTTTATGGCTGTCACTTGCTCCTGTTGTTATTGGTAAAATCTTCTCTCTCGTTCAAGTTGAGATGTGTAAAGTA GGAATACGACACTAATATGATCCATCAATGCCACCAGTTATGAAGATTTTTCAATATTATATAAAAATAAGAATCTTAAT TAAATTATAAGAGACCATCAGTTAGCATACAAAATGCTATTGTTTATCTAACTATTGTGCGAATTCCTTTATTATTGGTT CAAAAATTCAAAATCTCCCAAAATAGCTAATATAAAGTACAACTTTAAATAGTCAAAGTGGCCTTAGAGAAACAACGGGT GGTTGGTTTAGGTGGTGCGTACACTTGTACCTAATTCTTCTTAAGCATAAAGCCTCAAATTTGAGTCATTGATTCCTTCT CATCAAGTGGTACCTACCTAATTCTTCTAAGCAAAACCTCAAATTTGAGTCTTGGTTGCCTTTTGTACATGATACATGTT GAACTATTATTTTCTCTGTATTAACTTTAAATTTAGAGTTTCAACTTGAAGCCTGAACAAGTTGTAAATGGAGAATGCTA AAATACAATTATAACTTGTACACATACGCAGAGAAATTTAGTCAGTACAAATTGGCATAATGTACTTGCATGTCATCTAC TGTATAGGTGTGTCAATGGCATCATTGACGGAGCTCTCATTCAACTGGCTCGGCTTCATAAGTGCTATGATTTCAAACAT TTCCTTCACATACCGGAGCATCTACTCAAAGAAAGCCATGGTTAGCTTCTATGCTACCATATAAACTCATTGTTTTACTA ACTAGACACATACACTGATACACATATGTATCAATTTCTGATTTCCTCTTTGTTGACTTGCTATTGTTGTTTCATATTAT TATTGAACAACTCTCTGTGCAGACTGATATGGATAGCACCAATCTCTATGCTTACATCTCCATCATTGCTCTAATTGTCT GCCTACCACCGGCCATAATTCTGGAAGGGCCTGTACTGTTGAAGCATGGCTTCAATGATGCAATTGCCAAAGTAGGTCTT GTCAAGTTCGTCACAGATCTCTTCTGGGTTGGGATGTTTTACCACCTCTACAACCAGGTAAATCCTTCTTTTCAATGTTA TAGACGAGAGTTTCAAATATCTTAATATTCAAGCCTGCTCAAGTACCCTAAAGAGATCAGTTTCGTAATTCAAGTATAAT GAAGCATTTGTATTGCATACGATGTATGAGTAAGAAGTCTTACATTTGATGAAATAGAAATTATTGCAATGAAAGGACTC ATACACCAGTATTAGGTTTTTAGTAAAAGATGTTGTGTTCAGCTCACTGTTGCGGTTTGCTGTTAGCCCAATGTTGAGGT TTACCAGAGATCTAAGCATCTCGCAACCCAACAGCTGTATCAGAACCAATGGTTGGTCTGGTGAAACCATAGTGTGAAGA CTCCTTGTTTTGGCATTGTGGTGACTGCCTTAAGGTTTTAGGTGAAAGATGTAGTGTCCAGTAATCCAATATGGAGATCT CTACGAATTTTAAACATTTCACGGCCCAACAGCATTTGCTTTACTAAATAATAATATGTTTGCATTAGCATGTTTTCTTC ACAATAACCTATGACACCTGGAAGTTACTCACAAAAGTTTCTTATCAGAATTGATTTTGACTTACAAATCAATTCTAAAA GAATTTCAAAACATGCTATAAGTTGTTTCAATTCATTTATGTTTTGCATATTCCTACCTGAGTGAGGGAGATTCATTTTG TTGTTAATCTACTTATCAAATTCTATTGGTCAAAGGCAATTCCATTTTATGAAATGGCAATGATATATACATGTTCATTT TTCATCACCAGGTGGCCACCAACACACTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGCAACGTACTGAAACGTGTA TTTGTGATTGGATTTTCAATTATTATCTTCGGTAAATATCATTAAGTTTCCTGAATGCTATTTTCTTTATTGATTTTGGG TTTCCTTGCTCTTCAAGAAAAAGTTACCCTCCTCATAATCTGACATTCTGAGTGGCTTTGGTTGGGAACTCACACAGGTA ACAGGATTTCCACCCAAACTGGTATTGGAACAGCAATTGCAATTGCTGGAGTGGCAATCTACTCGCTTATCAAAGCCAGG ATCGAGGAAGAGAAGCGAGTAAGTCTTAGTGTTTCTAATGAATTACACCAAAACTGCATATTAAGATGTTGTTCCCCTTA AGCATTTAGTCGATGGTTCGATCCCTCAGCAATGTGTAACTGTGTATAGAGAAAGATTTGCTGAGAAAGACCTACACACC TAATGTGATCTTAGAGTCTTGAGAGGATTAATACATAGCTGCTAGCTGTGGAGATATGTTGGTGAAAAGAAAACCTTGAA ACTAACATTTTATTGTTCATGGGCAAGTCATAAATAAACCACTTTTTGTGTGCTTTCTTAGTCACCACTATAG
CDS sequence (LotjaGi4g1v0061600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGTTCTGCTCCGTCCTTGCCTCGCCGCCGCCTCCTCGCCGGCTGGTGGTAGCGATTCCGGAAGCGAAGGTTGCTCC GGTTGGGTTCTTTGCGAAGTACCCGGCTCTTGTCACCGGATTTTTCTTCTTCACATGGTACTTCTTGAATGTGATTTTCA ACATCCTCAACAAGAAGATCTACAATTACTTTCCCTATCCTTACTTTGTGTCGGTTATCCATTTGTTTGTGGGTGTGGTG TACTGTTTGGTGAGCTGGACCGTGGGCCTCCCTAAGCGCGCGCCTATAGACTCCAACCAGCTGAAATTGCTCATTCCTGT GGCTGTGTGTCATGCACTAGGCCATGTCACCAGCAATGTCTCGTTTGCCGCAGTTGCTGTTTCTTTCACACATACTGTTA AAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGCCAATCAATTCCCATCACTTTATGGCTGTCA CTTGCTCCTGTTGTTATTGGTGTGTCAATGGCATCATTGACGGAGCTCTCATTCAACTGGCTCGGCTTCATAAGTGCTAT GATTTCAAACATTTCCTTCACATACCGGAGCATCTACTCAAAGAAAGCCATGACTGATATGGATAGCACCAATCTCTATG CTTACATCTCCATCATTGCTCTAATTGTCTGCCTACCACCGGCCATAATTCTGGAAGGGCCTGTACTGTTGAAGCATGGC TTCAATGATGCAATTGCCAAAGTAGGTCTTGTCAAGTTCGTCACAGATCTCTTCTGGGTTGGGATGTTTTACCACCTCTA CAACCAGGTGGCCACCAACACACTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGCAACGTACTGAAACGTGTATTTG TGATTGGATTTTCAATTATTATCTTCGGTAACAGGATTTCCACCCAAACTGGTATTGGAACAGCAATTGCAATTGCTGGA GTGGCAATCTACTCGCTTATCAAAGCCAGGATCGAGGAAGAGAAGCGATCACCACTATAG
Protein sequence (LotjaGi4g1v0061600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLFCSVLASPPPPRRLVVAIPEAKVAPVGFFAKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVV YCLVSWTVGLPKRAPIDSNQLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLS LAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCLPPAIILEGPVLLKHG FNDAIAKVGLVKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNRISTQTGIGTAIAIAG VAIYSLIKARIEEEKRSPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| Phobius | 10 | 19 | 10 | - | – | |
| Phobius | 20 | 34 | 15 | - | – | |
| PANTHER | 26 | 336 | 311 | 1.0E-198 | – | |
| PANTHER | 26 | 336 | 311 | 1.0E-198 | – | |
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 35 | 56 | 22 | - | – | |
| TIGRFAM | 37 | 335 | 299 | 1.7E-131 | ||
| Pfam | 38 | 325 | 288 | 1.5E-111 | ||
| Phobius | 57 | 67 | 11 | - | – | |
| Phobius | 68 | 88 | 21 | - | – | |
| TMHMM | 68 | 90 | 23 | - | – | |
| SUPERFAMILY | 80 | 174 | 95 | 1.2E-6 | – | |
| Phobius | 89 | 102 | 14 | - | – | |
| Phobius | 103 | 127 | 25 | - | – | |
| TMHMM | 105 | 127 | 23 | - | – | |
| Phobius | 128 | 138 | 11 | - | – | |
| Phobius | 139 | 166 | 28 | - | – | |
| TMHMM | 148 | 170 | 23 | - | – | |
| Phobius | 167 | 177 | 11 | - | – | |
| Phobius | 178 | 198 | 21 | - | – | |
| TMHMM | 180 | 199 | 20 | - | – | |
| Phobius | 199 | 209 | 11 | - | – | |
| Phobius | 210 | 230 | 21 | - | – | |
| TMHMM | 211 | 230 | 20 | - | – | |
| Phobius | 231 | 249 | 19 | - | – | |
| TMHMM | 245 | 267 | 23 | - | – | |
| Phobius | 250 | 267 | 18 | - | – | |
| SUPERFAMILY | 255 | 326 | 72 | 2.09E-5 | – | |
| Phobius | 268 | 287 | 20 | - | – | |
| TMHMM | 279 | 301 | 23 | - | – | |
| Phobius | 288 | 304 | 17 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| Phobius | 305 | 309 | 5 | - | – | |
| Phobius | 310 | 327 | 18 | - | – | |
| Phobius | 328 | 339 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0061600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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