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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0071200 |
Transcript ID | LotjaGi4g1v0071200.4 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | protein kinase family protein; TAIR: AT3G50530.1 CDPK-related kinase; Swiss-Prot: sp|P53681|CRK_DAUCA CDPK-related protein kinase; TrEMBL-Plants: tr|A0A0S3R3B2|A0A0S3R3B2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0071200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9047949..9051434) extracted from Lotus japonicus Gifu genome v1.2.
ATGACTACAGCAATTGCAATTGAAGATGTGAGAAGGGAGGTGAAAATATTGCGAGCTTTGAATGGGCATAGCAATCTGGT AAAATTCTATGATGCATTTGAAGACCAAGAGAATGTCTACATTGTAATGGAGTAAGTTTAGTACATTTGTTTTCCTTGTC CATTTATATTTTAGTGGCAGTGAAGTTATAAGGCTTAAATGTACTTTTGGACCCCCAAGTTTACATTTTTTGCGATTTTT GACCCTGATCTTATTTTTCTACGAAATGAGACCCTCTCTAGGCAATTTGCATGCAGAAGATGGCTGGTCTTTTTGCCTTG AGAGGGTCTCGATTCGTAGAAAAATAAGATCAGGGTCAACAATCGCAAAAAATGTAAACTTGGGGGTCTAAAAGTGCATT TAAGTCAAGTTATAAATACTCACATACTTGCATAGACAATTAGACATATGTGCCCTCACACACACACACTTGGATACTCC AAAGTAACATATTAGGTTTTAAAAACTTCTGTCGATTTGAATGGCCATTGCCCGTGATAAGATTTTTTGCTTTTTCCTTT AATAACTGGTTTCATACTGACATTTCAGGTTATGTGAAGGGGGTGAGCTTTTAGATATGATACTATCAAGGTAATTCATA AAACAGCAGCCCTATCCTTTGTTTTTTATTTGCACTGCACCTTGCCACTCACTAACTACATGGTTTATTTCTTCTTTAGA GGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAGATACTAAATGTTGTAGCATTTTGCCATCTTCAGGG TGTGGTGCACCGAGATCTTAAGCCCGAGGTGAGCATAAGCTTTTCTTTTATAATTTTCACCAACACATCTATATCGTTCG CTAGGGAGGGAAATTGTAAGCCGAGCATGGATGGGTTAATTACACCCTCTTTCAAAAAAAATCATCCATTAATCATGTGT CACATGGACATGTTAATGTAGAATTGTTATAAACCCGTGCGGCACTTCTATGTTTTCCTTTTTTGGCTTGCAGGCGTTGT AAAACGTTTGATCAAGCTTACCTACTTTTCTGCATGATGAGTCCTAGCTAGTCAGTCAGCTTCTCCTCAGCTGAATGGAT TTTAGAATTCCTCAATCACCTTTAATTTAGTCTTTCTCTTGAACAACTGCTCTTTTTCAAATATCATTCAAAATAGGTAA AATATAATCCATCAGTATCATCCGACATTTTGCAGTTTCATTGAGGACACTAGTCACTTTGATCTGGCTCAAACGTTGAA CTAACTTATTCAGAATAGGTATTAGAATACAAAAATGAAAGTTAATAATAGAAAAGATCATGGAAAAACTGGTTTTGCCT GATAAACCCCTTTTTTGTGTTATATAGAGAACTACTACATTCAATATTAAATTGAATTATTGGATGTGGATTTCGATTTG GACATTTTTGCTTATTATTGTCTAACCCATTACATTTTTACATTCAGAATTTTTTGTATACGTCAAAGGATGAAAGTTCT GAGTTAAAAGCTATAGACTTTGGATTATCAGATTTTGTCAGACCAGGTTTTCCTTCACTAGTCCTTATTCGGTATTTGGT AGTAGTATCTTTTGCCTCGGAGTTTGGCAACAATCTTAATTACTATATCATGTCATACAGATGAAAGGCTTAATGACATC GTTGGAAGTGCATACTATGTGGCCCCTGAAGTGCTCCACAGATCTTACAGTACTGAGGCTGATGTGTGGAGTATAGGCGT GATAGCATATATTCTACTATGTGGTAGTCGCCCATTTTGGGCTCGAACAGAGTCTGGTATTTTTAAGGCAGTTTTGAAAG CTGATCCAAGCTTTGACGAAGCTCCCTGGCCAACTTTGTCTTCAGAGGCAAAAGATTTTGTCAAACGCCTATTGAATAAG GACCCACGGAAGCGAATTTCTGCTGCTCAGGCGCTTAGTGAGTTTTTATTGTTACCCTAACATCAGTGAGGTTATAGTGA GACTTTTTTTCAGCTTACAACAATAATCTTTTCTTTGCAGGTCATCCTTGGATACAGAGTTACAATAGTATAAAAGTTCC TCTTGATATTTTAATATTTAAGCTCATGAAGTCTTATATGAGATCGTCATCCTTGCGTAAAGCAGCCTTAAGGGTGAGTA TCTTTATTGGTGAAAGAAAAGTTGATCCAATTTTGTATGGTTGCTTTTCTTCCTGTTGGAATGAAATATTTCAACTTCAT TTCAAGTCTCATGTATGAAAAGGATATGTAACCTTCACACGACAGATACTTTTTATTCTTTTCCTGAACTTGTGGTTATC TTTTATTTTAAAAGGATTTTTTCTATTTGGTATGAAATGACTGGGTCATATGTGTGAGAACTGAGAAGATAGAGAGTATA CGTGAGAAGAGAGAGAAAAACCGAAATCATGGGGGAGAAATAAGACGGAAAAAAAAGGAAAAAAAAAAGACTCTTTCACA ATTACACCTTTTGTGGAAAAAGCATGACTTGCTTTTTGCACCTTCAATATTTTCCTTAAACATTACAAGACAGACAGTGG TATATGTTAGTATTGAAGTTTTAGTTTTGATTGTATTAGTTAATTTATATTCATCTGTTTTGCAGGCTTTGTCAAAGACA TTGACTGCTGATGAACTTTATTATTTGAGGGAGCAATTTGCATTGTTGGAACCGAGCAAAAATGGCAGCATATCTATAGA GAACATTAACAAGGTTAACCGTCACTTCAACCGGTCAGAAATTTAGTATTTGTTGGATTCTATAAGTTTTTCTCATTCTT CTTTTCTGGGCAGGCCTTGATGAAATATGCAACAGATGCCATGAAAGAGTCTCGAGTCACTGACTTTCTTTCCTCGGTAA TAATACATTTTTGTGTATGTAGATAACCCTTAATCTTACTAGTTACAGTCTCATGTTTCTTCTATGCCCCCTTTTCATGG CAGCTGAATTCATTACAATATAGAAGGATGGATTTTGAAGAATTTTGTGCAGCTGCACTAAGTGTGCATCAACTTGAAGC TCTTGATCGTTGGGAACAACATGCCCGCTGTGCATACGAACTTTTTGAGAAAGATGGAAACAGGGCTATTGTCATTGAAG AACTTGCTTCAGTAAGTTTAAAACCCTTCAGTCATAGTAACTGTTCTTAATGCCACATTTACAATTATTTCCTTTAGAAC TGAGATTGATTCTAGGGTTCTTTTTTCCTCCTTTTTCAAGATTTTATGTTGGATGTGATCCTTGTTAATAATCTTAGGAA CATGAACATTGGTAACTATTAATCACAAGTATATGGCTAATCACTATCATGTTTGAATGTTTTAGGAACTTGGACTTGGT CCTTCTATCCCTGTTCATGTTGTTCTTCATGACTGGATACGCCACACTGATGGGAAATTAAGCTTTCTAGGGTTTGTCAA ATTATTACATGGTGTATCTAGCCGAAGCCTAGCAAAGGCTCAATGA
CDS sequence (LotjaGi4g1v0071200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTACAGCAATTGCAATTGAAGATGTGAGAAGGGAGGTGAAAATATTGCGAGCTTTGAATGGGCATAGCAATCTGGT AAAATTCTATGATGCATTTGAAGACCAAGAGAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGTGAGCTTTTAGATA TGATACTATCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAGATACTAAATGTTGTAGCATTT TGCCATCTTCAGGGTGTGGTGCACCGAGATCTTAAGCCCGAGAATTTTTTGTATACGTCAAAGGATGAAAGTTCTGAGTT AAAAGCTATAGACTTTGGATTATCAGATTTTGTCAGACCAGATGAAAGGCTTAATGACATCGTTGGAAGTGCATACTATG TGGCCCCTGAAGTGCTCCACAGATCTTACAGTACTGAGGCTGATGTGTGGAGTATAGGCGTGATAGCATATATTCTACTA TGTGGTAGTCGCCCATTTTGGGCTCGAACAGAGTCTGGTATTTTTAAGGCAGTTTTGAAAGCTGATCCAAGCTTTGACGA AGCTCCCTGGCCAACTTTGTCTTCAGAGGCAAAAGATTTTGTCAAACGCCTATTGAATAAGGACCCACGGAAGCGAATTT CTGCTGCTCAGGCGCTTAGTCATCCTTGGATACAGAGTTACAATAGTATAAAAGTTCCTCTTGATATTTTAATATTTAAG CTCATGAAGTCTTATATGAGATCGTCATCCTTGCGTAAAGCAGCCTTAAGGGCTTTGTCAAAGACATTGACTGCTGATGA ACTTTATTATTTGAGGGAGCAATTTGCATTGTTGGAACCGAGCAAAAATGGCAGCATATCTATAGAGAACATTAACAAGG CCTTGATGAAATATGCAACAGATGCCATGAAAGAGTCTCGAGTCACTGACTTTCTTTCCTCGCTGAATTCATTACAATAT AGAAGGATGGATTTTGAAGAATTTTGTGCAGCTGCACTAAGTGTGCATCAACTTGAAGCTCTTGATCGTTGGGAACAACA TGCCCGCTGTGCATACGAACTTTTTGAGAAAGATGGAAACAGGGCTATTGTCATTGAAGAACTTGCTTCAGAACTTGGAC TTGGTCCTTCTATCCCTGTTCATGTTGTTCTTCATGACTGGATACGCCACACTGATGGGAAATTAAGCTTTCTAGGGTTT GTCAAATTATTACATGGTGTATCTAGCCGAAGCCTAGCAAAGGCTCAATGA
Protein sequence (LotjaGi4g1v0071200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTAIAIEDVRREVKILRALNGHSNLVKFYDAFEDQENVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAF CHLQGVVHRDLKPENFLYTSKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILL CGSRPFWARTESGIFKAVLKADPSFDEAPWPTLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIQSYNSIKVPLDILIFK LMKSYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISIENINKALMKYATDAMKESRVTDFLSSLNSLQY RRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGF VKLLHGVSSRSLAKAQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
ProSiteProfiles | 1 | 224 | 224 | 46.011 | ||
PANTHER | 1 | 413 | 413 | 3.6E-265 | – | |
PANTHER | 1 | 413 | 413 | 3.6E-265 | – | |
SMART | 3 | 224 | 222 | 1.1E-75 | ||
SUPERFAMILY | 6 | 250 | 245 | 5.93E-74 | ||
CDD | 6 | 223 | 218 | 3.15632E-118 | – | |
Pfam | 8 | 224 | 217 | 1.9E-65 | ||
Gene3D | 8 | 48 | 41 | 1.6E-118 | – | |
Gene3D | 49 | 230 | 182 | 1.6E-118 | – | |
ProSitePatterns | 86 | 98 | 13 | - | ||
Gene3D | 231 | 402 | 172 | 1.6E-118 | – | |
SUPERFAMILY | 252 | 406 | 155 | 1.73E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0071200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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