Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0071200.4

Overview

Field Value
Gene ID LotjaGi4g1v0071200
Transcript ID LotjaGi4g1v0071200.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description protein kinase family protein; TAIR: AT3G50530.1 CDPK-related kinase; Swiss-Prot: sp|P53681|CRK_DAUCA CDPK-related protein kinase; TrEMBL-Plants: tr|A0A0S3R3B2|A0A0S3R3B2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0071200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:9047949..9051434) extracted from Lotus japonicus Gifu genome v1.2.

ATGACTACAGCAATTGCAATTGAAGATGTGAGAAGGGAGGTGAAAATATTGCGAGCTTTGAATGGGCATAGCAATCTGGT AAAATTCTATGATGCATTTGAAGACCAAGAGAATGTCTACATTGTAATGGAGTAAGTTTAGTACATTTGTTTTCCTTGTC CATTTATATTTTAGTGGCAGTGAAGTTATAAGGCTTAAATGTACTTTTGGACCCCCAAGTTTACATTTTTTGCGATTTTT GACCCTGATCTTATTTTTCTACGAAATGAGACCCTCTCTAGGCAATTTGCATGCAGAAGATGGCTGGTCTTTTTGCCTTG AGAGGGTCTCGATTCGTAGAAAAATAAGATCAGGGTCAACAATCGCAAAAAATGTAAACTTGGGGGTCTAAAAGTGCATT TAAGTCAAGTTATAAATACTCACATACTTGCATAGACAATTAGACATATGTGCCCTCACACACACACACTTGGATACTCC AAAGTAACATATTAGGTTTTAAAAACTTCTGTCGATTTGAATGGCCATTGCCCGTGATAAGATTTTTTGCTTTTTCCTTT AATAACTGGTTTCATACTGACATTTCAGGTTATGTGAAGGGGGTGAGCTTTTAGATATGATACTATCAAGGTAATTCATA AAACAGCAGCCCTATCCTTTGTTTTTTATTTGCACTGCACCTTGCCACTCACTAACTACATGGTTTATTTCTTCTTTAGA GGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAGATACTAAATGTTGTAGCATTTTGCCATCTTCAGGG TGTGGTGCACCGAGATCTTAAGCCCGAGGTGAGCATAAGCTTTTCTTTTATAATTTTCACCAACACATCTATATCGTTCG CTAGGGAGGGAAATTGTAAGCCGAGCATGGATGGGTTAATTACACCCTCTTTCAAAAAAAATCATCCATTAATCATGTGT CACATGGACATGTTAATGTAGAATTGTTATAAACCCGTGCGGCACTTCTATGTTTTCCTTTTTTGGCTTGCAGGCGTTGT AAAACGTTTGATCAAGCTTACCTACTTTTCTGCATGATGAGTCCTAGCTAGTCAGTCAGCTTCTCCTCAGCTGAATGGAT TTTAGAATTCCTCAATCACCTTTAATTTAGTCTTTCTCTTGAACAACTGCTCTTTTTCAAATATCATTCAAAATAGGTAA AATATAATCCATCAGTATCATCCGACATTTTGCAGTTTCATTGAGGACACTAGTCACTTTGATCTGGCTCAAACGTTGAA CTAACTTATTCAGAATAGGTATTAGAATACAAAAATGAAAGTTAATAATAGAAAAGATCATGGAAAAACTGGTTTTGCCT GATAAACCCCTTTTTTGTGTTATATAGAGAACTACTACATTCAATATTAAATTGAATTATTGGATGTGGATTTCGATTTG GACATTTTTGCTTATTATTGTCTAACCCATTACATTTTTACATTCAGAATTTTTTGTATACGTCAAAGGATGAAAGTTCT GAGTTAAAAGCTATAGACTTTGGATTATCAGATTTTGTCAGACCAGGTTTTCCTTCACTAGTCCTTATTCGGTATTTGGT AGTAGTATCTTTTGCCTCGGAGTTTGGCAACAATCTTAATTACTATATCATGTCATACAGATGAAAGGCTTAATGACATC GTTGGAAGTGCATACTATGTGGCCCCTGAAGTGCTCCACAGATCTTACAGTACTGAGGCTGATGTGTGGAGTATAGGCGT GATAGCATATATTCTACTATGTGGTAGTCGCCCATTTTGGGCTCGAACAGAGTCTGGTATTTTTAAGGCAGTTTTGAAAG CTGATCCAAGCTTTGACGAAGCTCCCTGGCCAACTTTGTCTTCAGAGGCAAAAGATTTTGTCAAACGCCTATTGAATAAG GACCCACGGAAGCGAATTTCTGCTGCTCAGGCGCTTAGTGAGTTTTTATTGTTACCCTAACATCAGTGAGGTTATAGTGA GACTTTTTTTCAGCTTACAACAATAATCTTTTCTTTGCAGGTCATCCTTGGATACAGAGTTACAATAGTATAAAAGTTCC TCTTGATATTTTAATATTTAAGCTCATGAAGTCTTATATGAGATCGTCATCCTTGCGTAAAGCAGCCTTAAGGGTGAGTA TCTTTATTGGTGAAAGAAAAGTTGATCCAATTTTGTATGGTTGCTTTTCTTCCTGTTGGAATGAAATATTTCAACTTCAT TTCAAGTCTCATGTATGAAAAGGATATGTAACCTTCACACGACAGATACTTTTTATTCTTTTCCTGAACTTGTGGTTATC TTTTATTTTAAAAGGATTTTTTCTATTTGGTATGAAATGACTGGGTCATATGTGTGAGAACTGAGAAGATAGAGAGTATA CGTGAGAAGAGAGAGAAAAACCGAAATCATGGGGGAGAAATAAGACGGAAAAAAAAGGAAAAAAAAAAGACTCTTTCACA ATTACACCTTTTGTGGAAAAAGCATGACTTGCTTTTTGCACCTTCAATATTTTCCTTAAACATTACAAGACAGACAGTGG TATATGTTAGTATTGAAGTTTTAGTTTTGATTGTATTAGTTAATTTATATTCATCTGTTTTGCAGGCTTTGTCAAAGACA TTGACTGCTGATGAACTTTATTATTTGAGGGAGCAATTTGCATTGTTGGAACCGAGCAAAAATGGCAGCATATCTATAGA GAACATTAACAAGGTTAACCGTCACTTCAACCGGTCAGAAATTTAGTATTTGTTGGATTCTATAAGTTTTTCTCATTCTT CTTTTCTGGGCAGGCCTTGATGAAATATGCAACAGATGCCATGAAAGAGTCTCGAGTCACTGACTTTCTTTCCTCGGTAA TAATACATTTTTGTGTATGTAGATAACCCTTAATCTTACTAGTTACAGTCTCATGTTTCTTCTATGCCCCCTTTTCATGG CAGCTGAATTCATTACAATATAGAAGGATGGATTTTGAAGAATTTTGTGCAGCTGCACTAAGTGTGCATCAACTTGAAGC TCTTGATCGTTGGGAACAACATGCCCGCTGTGCATACGAACTTTTTGAGAAAGATGGAAACAGGGCTATTGTCATTGAAG AACTTGCTTCAGTAAGTTTAAAACCCTTCAGTCATAGTAACTGTTCTTAATGCCACATTTACAATTATTTCCTTTAGAAC TGAGATTGATTCTAGGGTTCTTTTTTCCTCCTTTTTCAAGATTTTATGTTGGATGTGATCCTTGTTAATAATCTTAGGAA CATGAACATTGGTAACTATTAATCACAAGTATATGGCTAATCACTATCATGTTTGAATGTTTTAGGAACTTGGACTTGGT CCTTCTATCCCTGTTCATGTTGTTCTTCATGACTGGATACGCCACACTGATGGGAAATTAAGCTTTCTAGGGTTTGTCAA ATTATTACATGGTGTATCTAGCCGAAGCCTAGCAAAGGCTCAATGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0071200.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTACAGCAATTGCAATTGAAGATGTGAGAAGGGAGGTGAAAATATTGCGAGCTTTGAATGGGCATAGCAATCTGGT AAAATTCTATGATGCATTTGAAGACCAAGAGAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGTGAGCTTTTAGATA TGATACTATCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAGATACTAAATGTTGTAGCATTT TGCCATCTTCAGGGTGTGGTGCACCGAGATCTTAAGCCCGAGAATTTTTTGTATACGTCAAAGGATGAAAGTTCTGAGTT AAAAGCTATAGACTTTGGATTATCAGATTTTGTCAGACCAGATGAAAGGCTTAATGACATCGTTGGAAGTGCATACTATG TGGCCCCTGAAGTGCTCCACAGATCTTACAGTACTGAGGCTGATGTGTGGAGTATAGGCGTGATAGCATATATTCTACTA TGTGGTAGTCGCCCATTTTGGGCTCGAACAGAGTCTGGTATTTTTAAGGCAGTTTTGAAAGCTGATCCAAGCTTTGACGA AGCTCCCTGGCCAACTTTGTCTTCAGAGGCAAAAGATTTTGTCAAACGCCTATTGAATAAGGACCCACGGAAGCGAATTT CTGCTGCTCAGGCGCTTAGTCATCCTTGGATACAGAGTTACAATAGTATAAAAGTTCCTCTTGATATTTTAATATTTAAG CTCATGAAGTCTTATATGAGATCGTCATCCTTGCGTAAAGCAGCCTTAAGGGCTTTGTCAAAGACATTGACTGCTGATGA ACTTTATTATTTGAGGGAGCAATTTGCATTGTTGGAACCGAGCAAAAATGGCAGCATATCTATAGAGAACATTAACAAGG CCTTGATGAAATATGCAACAGATGCCATGAAAGAGTCTCGAGTCACTGACTTTCTTTCCTCGCTGAATTCATTACAATAT AGAAGGATGGATTTTGAAGAATTTTGTGCAGCTGCACTAAGTGTGCATCAACTTGAAGCTCTTGATCGTTGGGAACAACA TGCCCGCTGTGCATACGAACTTTTTGAGAAAGATGGAAACAGGGCTATTGTCATTGAAGAACTTGCTTCAGAACTTGGAC TTGGTCCTTCTATCCCTGTTCATGTTGTTCTTCATGACTGGATACGCCACACTGATGGGAAATTAAGCTTTCTAGGGTTT GTCAAATTATTACATGGTGTATCTAGCCGAAGCCTAGCAAAGGCTCAATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0071200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTTAIAIEDVRREVKILRALNGHSNLVKFYDAFEDQENVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAF CHLQGVVHRDLKPENFLYTSKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILL CGSRPFWARTESGIFKAVLKADPSFDEAPWPTLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIQSYNSIKVPLDILIFK LMKSYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISIENINKALMKYATDAMKESRVTDFLSSLNSLQY RRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGF VKLLHGVSSRSLAKAQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50011
1 224 224 46.011
IPR000719
PANTHER
PTHR24349:SF249
1 413 413 3.6E-265 –
PANTHER
PTHR24349
1 413 413 3.6E-265 –
SMART
SM00220
3 224 222 1.1E-75
IPR000719
SUPERFAMILY
SSF56112
6 250 245 5.93E-74
IPR011009
CDD
cd05117
6 223 218 3.15632E-118 –
Pfam
PF00069
8 224 217 1.9E-65
IPR000719
Gene3D
G3DSA:3.30.200.20
8 48 41 1.6E-118 –
Gene3D
G3DSA:1.10.510.10
49 230 182 1.6E-118 –
ProSitePatterns
PS00108
86 98 13 -
IPR008271
Gene3D
G3DSA:1.10.238.10
231 402 172 1.6E-118 –
SUPERFAMILY
SSF47473
252 406 155 1.73E-16
IPR011992

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0071200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…