Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0075200 |
Transcript ID | LotjaGi4g1v0075200.3 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TAIR: AT4G34030.1 3-methylcrotonyl-CoA carboxylase; Swiss-Prot: sp|Q9LDD8|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; TrEMBL-Plants: tr|I1KM07|I1KM07_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9652497..9656623) extracted from Lotus japonicus Gifu genome v1.2.
GCAAAACCACATAGGATAAACAATGATCGGGTTAATCGGAAGAAAAGCAAGCTGGGCATCCTCCAATTTGGTAGGAAGAA GAGGCTTTTGCTTGGGAATCCTTCCTCATAGCAATGGTGGTGCCACTGCCATGGAAGATTTGCTTTCCCAGCTCCAATCT CACGTCCATAAAGCTCTTGCTGGTGGAGGAGCTGAAGCAGTGAAGAGGAACACAAGTAGGAATAAACTTCTACCGAGAGA AAGAATCGATCGCCTTCTTGATCCTGGTTCTTCCTTCCTCGAGCTTTCACAGGTTTGCATATAAATATATAGGTGCCCAT GTGGTTTAATTTACTTTTTGTGTTCAGGATTGATTTGGGTTTGTGGAAAGTTTGTGACTTTAGTGTGTTTGGTTACACAT TGGGAGCTTCAGAATCAACTCTCATAGAGTGAAATCAATTCTGGATGACAATATTGTGGAAGTGATTTCGTTCAGAATTG ATTTCAGCTCCAAAATAGAAGCTAGAGAGAGTGACTTTTGCATTAGACATAATCAATTCTGAGATTTTACAACTGAATTT TATAAGATTACCCTACAAAAATCATTTTTTTCACAAATGTATTGAAATATAAATCACAACATTTTAGCTCATTTATCCTG TGCAATTTTTCTAGAATCAATTTTGCTGACACTGATCCAAACAAACACACATAATAGCTTCTGCGTTGAACATAGTCAAC TACGAGATTTCATAACCGGATTGCACAACATTAAAATAACCACTTTTTTCAAAGATGTATCCAAACATAAATCATTTCAC TTTTAACTCACTTTACCTATAGTCAAGTTTGCCAAAATCAATTGTGATATCCCTGATTCTAACACGTACTTAGTCATGTG AAGTGACTACTTGCAATGAGTAATGGTTTAAGGGTTGGAAATGGGAATTATGAGAAATGGGTTATGTGTTTTACCAAAGA AAGGTTTTAACTTTAGATTGGTAAAGCTTGCAGGACATGAGTTGTATGAAGAACCCTTGCCTTCTGGTGGAGTTGTCACT GGGATAGGTCCTGTGCATGGGCGACTTTGTATGTTTGTGGCCAATGATCCCACTGTTAAGGGAGGGACCTATTATCCTAT TACTGTTAAGAAGCATCTCAGAGCACAGGAGATTGCTTCTCAGTGCAAATTGCCCTGCGTGTATCTTGTTGACAGTGGAG GTGCTTTCCTTCCCAAGCAGGCTGATGTCTTTCCAGACAGGGAGAACTTCGGTAGAATATTCTATAATCAAGCTCTAATG TCTGCTGAAGGGATTCCGCAGATTGCGTTGGTTTTAGGTTCTTGCACGGCTGGGGGTGCATACATACCTGCTATGGCTGA TGAAAGTGTGATGGTCAAGGGAAATGGCACCATTTTTTTAGCAGGACCTCCTCTTGTTAAGGTCAGCTCCAGCCACTCTG ATATTCCAAAATGCTATTGTGTGTGATAGTCTCTGTCTATTTGTTTGTTCTTCTTTGTTTTTTTACGTTGAGAAGTTCCA CATTGACTAGAGATATGGCCAAAATAGTCCTTATAAAGGGTAGAACAACTTTCACTTCTAAGGTAGCTTTTGGGATAGTG TTAGGCCTGACCCAAATTTTAAGTTGTATATCTTTTAACCATAGTTCACATTAATCAAATGATTTTATAGGCTGCTACTG GAGAAGAAGTCTCTGCAGAGGATTTGGGAGGTGCTACTGTGCACTGCAAGACATCAGGTGTTTCAGACTATTTTGCTCAA GGTATTTTCTCCACCACTTATCTGAATGGATAGAGCATGTGATAGCTGCTGTAGTCTTATTGGTTTCTATTATTGATATT ATACATTTTTTGCTTCTCTGTAGATGAATTTCATGCACTTGCACTTGGGAGGAACATCATTAAGAATTTGCACATGGCTG GGAAAGATGTCTTGGCAAATGGATTGCAAAATTTAAGCTATGAATATAAAGAGCCTCTATATGATGTCAACGAACTTCGT TCTATAGCCCCCACTGATCTTAAGAAGCAGTTTGATGTCCGATCAGTTATTGCTCGTATTGTGGATGGAAGTGAATTTGA TGAATTCAAGAAATTGTATGGCACTGTGAGGGCATATTCACCTTACTGTCTACATGCTTAATCATTATATTTATATCTAT GTGTTGCTATGAAACTTCACTTTTGCTTTTCTCTCTAGGTGCTAGTACCCTTGATGAGTTGTCACACATTTATTGGTTGT TAGTTTTCACAATAAATATTTGGAGTCCACCAAGTATATGCAGCAACCAAGAAATGTTTGACAAGTTCTAAATGTACTGG TAGCCTGGAAAAGAAGTACTTTAATGATTACATGCGTGTATGATATATCCTTATTCAACATATATGCAGACTCTCGTAAC AGGTTTTGCTAGAATTTATGGACAGCCTGTAGGAATTATTGGAAACAATGGGATTTTATTCAACGAATCTGCTCTGAAAG GGGCCCATTTCATTGAAATATGTACTCAACGTAACATTCCCTTGGTCTTCCTTCAGAACATCACTGGATTCATGGTATGA ATTTAAACTTTTTCTTCAGTTACTGTGATTATGATAGTTTGTTTTATTATTCTGAGTAGAATGGTTCCCTTCTCCTTCAG AACATCACTGGGTTCGCAGTATGAATAATATCATTATATTTTAGTGTTTATTAGTTGCGAGATGCTGAATTGTCTAGTAT TGTCCATGATGAGTGATGACATGAATAAATGATCTACATGATTGATGGGGGGAATCAGGAAATAGTAACGAGAGTTTGAG AATCATCATCTGTAATTTGATAAAACCATAATGATGTGTAGATTTAGACAATCCAGCTGGATTATTGACACTGTAAGACA AGTCAATGCACATGAGATCTCAAACTTCAGTTTGATCTATCTCCTTGACCTTTTTTAGCCATGATCCATATTCTTATATT AATTATAGAAGCTGAAGAGATACATTTGCTATTAGCTTGTCTCTCATTTTTTCCAGGTCAAGAATGGTTAAATTATTCAA ATATGACACTGAAAAACTATCCCATTAGTAGTTTGCTGAAGAATGAGACTGTAATTTGTGTCTATTTGGTAGGTGGGCTC AAGATCTGAGGCAAATGGCATAGCAAAATCTGGTGCGAAAATGGTGATGGCAGTTTCTTGCGCAAAGGTTTGTCAATTCT CACCTATTTATAAAACTGTTTACAATTGTGCTTATATGGCGTCTGCACCATGTCTTTTTGGGGGGTGGGGGGTTGGAGCT GTTAAGTCAATTTAAACGAAAGAAAATAGAAGGTATAGTAGAATGAAAGAGGTTGTAATATGTTTATAAAGGTGAATCTC AACTCATGCAAGATATTCTCGAAAATAAATTTTTTTGCTTCAAATAAATATCTGCAGGTACCTAAAATCACCATAATTGT CGGCGGAAGCTTCGGTGCAGGAAACTATGCAATGTGTGGCCGTGCCTACAGTCCCAATTTCATGTTCCTTTGGCCTAATG CCAGAATATCTGTGATGGGTGGTGCTCAGGTAAGTGTATCTCTCTACAAATTATTGCCATTTCTGAACAGCTCTCGACAC CGTCATTGTTCTGAACTTTTTGAGATGCATATCATGTTTTATGCGTGTGTCCTCCATTTGAAATCAAACTTGATTTTTGA ATATTTGATTGATCATTAGTTGAAATTCATCTGGGTTTTGTGGATTTTACATATATTCCTGTGGAATGTGATCATCAGGC TGCTGGGGTACTGTCTCAAATAGAGAAAACCAACAAGAAAAAGCAAGGAATTCAGGTAAAATATGATTGAGGAAATATTG TTTAGTTTACTTGCTTATAACAAATTCATGGCTTTCTCATTTGCCTTTTTTGTGTCTTGATGTGCATTATACTTGTAATG CAGTGGAGCAAGGAAGAAGAAGAAAAGTTCAAAACAAAAGTAGTGGAGGCTTATGAGGTAGAAGGAAGTCCTTATTACTC AACAGCGAGGCTTTGGGATGATGGAATCATAGATCCAGCGGATACAAGAAAAGTGATTGGTCTGAGCATATCTGCTTCCT TGAACCGCGCCATAGAAGATACCAAATTTGGTGTGTTTAGAATGTGA
CDS sequence (LotjaGi4g1v0075200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTGGCCAATGATCCCACTGTTAAGGGAGGGACCTATTATCCTATTACTGTTAAGAAGCATCTCAGAGCACAGGA GATTGCTTCTCAGTGCAAATTGCCCTGCGTGTATCTTGTTGACAGTGGAGGTGCTTTCCTTCCCAAGCAGGCTGATGTCT TTCCAGACAGGGAGAACTTCGGTAGAATATTCTATAATCAAGCTCTAATGTCTGCTGAAGGGATTCCGCAGATTGCGTTG GTTTTAGGTTCTTGCACGGCTGGGGGTGCATACATACCTGCTATGGCTGATGAAAGTGTGATGGTCAAGGGAAATGGCAC CATTTTTTTAGCAGGACCTCCTCTTGTTAAGGCTGCTACTGGAGAAGAAGTCTCTGCAGAGGATTTGGGAGGTGCTACTG TGCACTGCAAGACATCAGGTGTTTCAGACTATTTTGCTCAAGATGAATTTCATGCACTTGCACTTGGGAGGAACATCATT AAGAATTTGCACATGGCTGGGAAAGATGTCTTGGCAAATGGATTGCAAAATTTAAGCTATGAATATAAAGAGCCTCTATA TGATGTCAACGAACTTCGTTCTATAGCCCCCACTGATCTTAAGAAGCAGTTTGATGTCCGATCAGTTATTGCTCGTATTG TGGATGGAAGTGAATTTGATGAATTCAAGAAATTGTATGGCACTGTGAGGGCATATTCACCTTACTGTCTACATACTCTC GTAACAGGTTTTGCTAGAATTTATGGACAGCCTGTAGGAATTATTGGAAACAATGGGATTTTATTCAACGAATCTGCTCT GAAAGGGGCCCATTTCATTGAAATATGTACTCAACGTAACATTCCCTTGGTCTTCCTTCAGAACATCACTGGATTCATGG TGGGCTCAAGATCTGAGGCAAATGGCATAGCAAAATCTGGTGCGAAAATGGTGATGGCAGTTTCTTGCGCAAAGGTACCT AAAATCACCATAATTGTCGGCGGAAGCTTCGGTGCAGGAAACTATGCAATGTGTGGCCGTGCCTACAGTCCCAATTTCAT GTTCCTTTGGCCTAATGCCAGAATATCTGTGATGGGTGGTGCTCAGGCTGCTGGGGTACTGTCTCAAATAGAGAAAACCA ACAAGAAAAAGCAAGGAATTCAGTGGAGCAAGGAAGAAGAAGAAAAGTTCAAAACAAAAGTAGTGGAGGCTTATGAGGTA GAAGGAAGTCCTTATTACTCAACAGCGAGGCTTTGGGATGATGGAATCATAGATCCAGCGGATACAAGAAAAGTGATTGG TCTGAGCATATCTGCTTCCTTGAACCGCGCCATAGAAGATACCAAATTTGGTGTGTTTAGAATGTGA
Protein sequence (LotjaGi4g1v0075200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIAL VLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGRNII KNLHMAGKDVLANGLQNLSYEYKEPLYDVNELRSIAPTDLKKQFDVRSVIARIVDGSEFDEFKKLYGTVRAYSPYCLHTL VTGFARIYGQPVGIIGNNGILFNESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVP KITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKVVEAYEV EGSPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIEDTKFGVFRM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 167 | 167 | 7.6E-62 | – | |
PANTHER | 1 | 448 | 448 | 2.8E-248 | – | |
PANTHER | 1 | 448 | 448 | 2.8E-248 | – | |
ProSiteProfiles | 1 | 175 | 175 | 44.81 | ||
SUPERFAMILY | 1 | 161 | 161 | 1.99E-48 | ||
Pfam | 2 | 439 | 438 | 7.6E-137 | ||
SUPERFAMILY | 134 | 429 | 296 | 8.54E-80 | ||
Gene3D | 177 | 448 | 272 | 2.6E-101 | – | |
ProSiteProfiles | 184 | 440 | 257 | 49.635 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Ligase activity | Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. |
Expression pattern of LotjaGi4g1v0075200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…