Domain Predictions — View

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PF01039

Source: Pfam

Description

Carboxyl transferase domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0268829.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: acetyl-CoA carboxylase 1-like [Glycine max] gi\|356508126\|ref\|XP_003522811.1\|	Domains Coil G3DSA:2.40.50.100 G3DSA:3.90.226.10 IPR000022 IPR000089 IPR001882 IPR011053 IPR011762 IPR011763 IPR013537 IPR029045 PF00364 PF01039 PF08326 PS00188 PS50968 PS50980 PS50989 PTHR18866 PTHR18866:SF106 SSF51230 SSF52096 cd06850	23
Lj0g3v0268829.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: acetyl-CoA carboxylase 1-like [Cicer arietinum] gi\|502130304\|ref\|XP_004500605.1\|	Domains Coil G3DSA:3.90.226.10 IPR000022 IPR011762 IPR011763 IPR029045 PF01039 PS50980 PS50989 PTHR18866 PTHR18866:SF106 SSF52096	12
Lj4g3v0619950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-methylcrotonyl-CoA carboxylase [Medicago truncatula] gi\|357475341\|ref\|XP_003607956.1\|	Domains G3DSA:3.90.226.10 IPR000022 IPR011762 IPR011763 IPR029045 PF01039 PS50980 PS50989 PTHR22855 PTHR22855:SF13 SSF52096	11
Ljchlorog3v0000580.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carboxytransferase beta subunit [Lotus japonicus] gi\|13518447\|ref\|NP_084807.1\|	Domains G3DSA:3.90.226.10 IPR000022 IPR000438 IPR011762 IPR029045 MF_01395 PF01039 PR01070 PS50980 PTHR22855 PTHR22855:SF15 SSF52096 TIGR00515	13
LotjaGi1g1v0246300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp\|Q38970\|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr\|A0A0B2SKF5\|A0A0B2SKF5_GLYSO Acetyl-CoA carboxylase 1; Found in the gene: LotjaGi1g1v0246300	Domains Coil G3DSA:2.40.460.10 G3DSA:2.40.50.100 G3DSA:3.90.226.10 IPR011762 IPR011763 IPR013537 IPR029045 IPR034733 NON_CYTOPLASMIC_DOMAIN PF01039 PF08326 PS50980 PS50989 PTHR45728 PTHR45728:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52096	21
LotjaGi1g1v0246300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp\|Q38970\|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr\|A0A0R0K6S7\|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300	Domains Coil G3DSA:2.40.460.10 G3DSA:2.40.50.100 G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.12210 G3DSA:3.90.1770.10 G3DSA:3.90.226.10 IPR000089 IPR001882 IPR005479 IPR005481 IPR005482 IPR011053 IPR011054 IPR011761 IPR011762 IPR011763 IPR011764 IPR013537 IPR013815 IPR016185 IPR029045 IPR034733 PF00289 PF00364 PF01039 PF02785 PF02786 PF08326 PS00188 PS00867 PS50968 PS50975 PS50979 PS50980 PS50989 PTHR45728 PTHR45728:SF4 SM00878 SSF51230 SSF51246 SSF52096 SSF52440 SSF56059 cd06850	46
LotjaGi1g1v0246300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp\|Q38970\|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr\|A0A0R0K6S7\|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300	Domains Coil G3DSA:2.40.460.10 G3DSA:2.40.50.100 G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.12210 G3DSA:3.90.1770.10 G3DSA:3.90.226.10 IPR000089 IPR001882 IPR005479 IPR005481 IPR005482 IPR011053 IPR011054 IPR011761 IPR011762 IPR011763 IPR011764 IPR013537 IPR013815 IPR016185 IPR029045 IPR034733 PF00289 PF00364 PF01039 PF02785 PF02786 PF08326 PS00188 PS00867 PS50968 PS50975 PS50979 PS50980 PS50989 PTHR45728 PTHR45728:SF4 SM00878 SSF51230 SSF51246 SSF52096 SSF52440 SSF56059 cd06850	46
LotjaGi1g1v0246300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp\|Q38970\|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr\|I1JVH6\|I1JVH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300	Domains Coil G3DSA:2.40.460.10 G3DSA:2.40.50.100 G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.12210 G3DSA:3.90.1770.10 G3DSA:3.90.226.10 IPR000089 IPR001882 IPR005479 IPR005481 IPR005482 IPR011053 IPR011054 IPR011761 IPR011762 IPR011763 IPR011764 IPR013537 IPR013815 IPR016185 IPR029045 IPR034733 PF00289 PF00364 PF01039 PF02785 PF02786 PF08326 PS00188 PS00867 PS50968 PS50975 PS50979 PS50980 PS50989 PTHR45728 PTHR45728:SF4 SM00878 SSF51230 SSF51246 SSF52096 SSF52440 SSF56059 cd06850	46
LotjaGi1g1v0246300.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp\|Q38970\|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr\|A0A0R0K6S7\|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300	Domains Coil G3DSA:2.40.460.10 G3DSA:2.40.50.100 G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.12210 G3DSA:3.90.1770.10 G3DSA:3.90.226.10 IPR000089 IPR001882 IPR005479 IPR005481 IPR005482 IPR011053 IPR011054 IPR011761 IPR011762 IPR011763 IPR011764 IPR013537 IPR013815 IPR016185 IPR029045 IPR034733 PF00289 PF00364 PF01039 PF02785 PF02786 PF08326 PS00188 PS00867 PS50968 PS50975 PS50979 PS50980 PS50989 PTHR45728 PTHR45728:SF4 SM00878 SSF51230 SSF51246 SSF52096 SSF52440 SSF56059 cd06850	46
LotjaGi1g1v0246300.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp\|Q38970\|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr\|A0A0R0K6S7\|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300	Domains Coil G3DSA:2.40.460.10 G3DSA:2.40.50.100 G3DSA:3.30.470.20 G3DSA:3.90.226.10 IPR000089 IPR001882 IPR005482 IPR011053 IPR011054 IPR011762 IPR011763 IPR011764 IPR013537 IPR029045 IPR034733 PF00364 PF01039 PF02785 PF08326 PS00188 PS50968 PS50979 PS50980 PS50989 PTHR45728 PTHR45728:SF4 SM00878 SSF51230 SSF51246 SSF52096 cd06850	32
LotjaGi4g1v0075200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TAIR: AT4G34030.1 3-methylcrotonyl-CoA carboxylase; Swiss-Prot: sp\|Q9LDD8\|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; TrEMBL-Plants: tr\|G7JL66\|G7JL66_MEDTR Methylcrotonyl-CoA carboxylase beta chain, putative; Found in the gene: LotjaGi4g1v0075200	Domains G3DSA:3.90.226.10 IPR011762 IPR011763 IPR029045 IPR034733 PF01039 PS50980 PS50989 PTHR22855 PTHR22855:SF13 SSF52096	11
LotjaGi4g1v0075200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TAIR: AT4G34030.1 3-methylcrotonyl-CoA carboxylase; Swiss-Prot: sp\|Q9LDD8\|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; TrEMBL-Plants: tr\|G7JL66\|G7JL66_MEDTR Methylcrotonyl-CoA carboxylase beta chain, putative; Found in the gene: LotjaGi4g1v0075200	Domains G3DSA:3.90.226.10 IPR011762 IPR011763 IPR029045 IPR034733 PF01039 PS50980 PS50989 PTHR22855 PTHR22855:SF13 SSF52096	11
LotjaGi4g1v0075200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TAIR: AT4G34030.1 3-methylcrotonyl-CoA carboxylase; Swiss-Prot: sp\|Q9LDD8\|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; TrEMBL-Plants: tr\|I1KM07\|I1KM07_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075200	Domains G3DSA:3.90.226.10 IPR011762 IPR011763 IPR029045 IPR034733 PF01039 PS50980 PS50989 PTHR22855 PTHR22855:SF13 SSF52096	11
LotjaGi4g1v0075200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TAIR: AT4G34030.1 3-methylcrotonyl-CoA carboxylase; Swiss-Prot: sp\|Q9LDD8\|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; TrEMBL-Plants: tr\|K7K832\|K7K832_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075200	Domains G3DSA:3.90.226.10 IPR011762 IPR011763 IPR029045 IPR034733 PF01039 PS50980 PS50989 PTHR22855 PTHR22855:SF13 SSF52096	11
LotjaGi4g1v0075200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TAIR: AT4G34030.1 3-methylcrotonyl-CoA carboxylase; Swiss-Prot: sp\|Q9LDD8\|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; TrEMBL-Plants: tr\|I1KM07\|I1KM07_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075200	Domains G3DSA:3.90.226.10 IPR011762 IPR011763 IPR029045 IPR034733 PF01039 PS50980 PS50989 PTHR22855 PTHR22855:SF13 SSF52096	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF52096	SUPERFAMILY	1	6.67