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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0138900 |
Transcript ID | LotjaGi4g1v0138900.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Monosaccharide-sensing protein 2; TAIR: AT3G51490.2 tonoplast monosaccharide transporter3; Swiss-Prot: sp|Q9SD00|MSSP3_ARATH Monosaccharide-sensing protein 3; TrEMBL-Plants: tr|G7L8N7|G7L8N7_MEDTR Tonoplast monosaccharide transporter 2; Found in the gene: LotjaGi4g1v0138900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:20665476..20670604) extracted from Lotus japonicus Gifu genome v1.2.
AGAGACTCCGTTTTCAACAACTAGTCACGAACACACAAGCACCATGCAACCATGAATTTTGAGTTGTCATTATTCTTTTG ACCTTGAACTAATTAACTGAACAAAGTCTCACTTTAACAGCTTCATTGGAAACACTTTGATGAAAGCCTTACGTACACAT AACAAAAATTAACTAAAACGTGCACACTTTAGAAGGGTGTTCAAAGCTAGGTATTTGCGTAAGGTACCTTTGAACTCTAC TATCTTGGTTTGATCTTTGCACATTTGAAGATATTGATCGATCTAAAAATAATTAAAGTTTTTTATTTGATTGCAACTTG CAAGTGATCCAAATTGTGTTCTGAGTTTGGTTGTTTGGCTAAATTCTTAGCCAAGAACAACAATGAGGGAGGTTGTGATC ATTTCAATTGCTGCTACTCTTGGGAGTCTGCTTGTTGGATGGGATAGTTCAACCATTGCAGGTGGGTATTGTCTATATTA CATTACAACATCCTATTTATCACACAATTATATGGTGTTTATTGTCTGTCATTGCTAAGTTATACATCTAATCACTCAAA TATGAAAAATCTTTAAGATCATACTTATATTCATTTGACTTCATGAATATTAGTTTTATTTTTCGTTTATGATATTTATA AGTGATTCAAATGACACCCACACCAAATGTAGTTGGCTCATGAGGTACAAGCCAAATTCACCCTAAGCAATGTATTAGGT CTAAGTCTTGTCAATAGAAAGAAAAAACATGAGAGAGTTAGCTCGTTATGATTTATGCTGTGAATGTTTTCAGCTCGAAC AGAACGTTGTGTTAAATAAATTGAACTGGCATTATTTGATCTCATTGATAAAATTGAACAAACATGTTACTGCTACATCA TTGCAGGGGGCATGAGTTACATAAAAAAAGAATTTAACTTGGGGACATATCCCACACTTGAGGGGCTAATTGTGTCCATG TCCTTTCTCACCGGCACCTTTGTGACAATATTCTCCGGGACAGTTTCCGACATGTTCGGAAGGCGACCAATGTTGATAAC ATCATCGGTTATGTTTTTCCTCAGTGGTTTGGTGATGATGTGGGCTCCTAATGTCTCTGTAGTTCTGTTCTCAAGGCTGT TGGATGGAGTTGCCATTGCACTAGCCATAACTCTCACTCCTCTCTACATATCTGAGATAGCGCCGCCGGATATCCGAGGC ACGCTGAACACGCTGCCGCAATTTTCGTGCTCTGGGGGAATGTTTGTTGCATACATCATGGTGTTCTCCATGTCCTTGAT GGACTCACCAAGTTGGAGGGCCATGCTTGGTGTTGTTTCGGTTCCTTCCATTGCATACTTTCTTCTCGCCGTGTTTTATC TTCCGGAATCTCCTCCATGGCTTGTAAGTAAAGGAAGACTTACTGAGGCTACCAAAGTTCTTCAAAGGATTCGCGGCGTG GAAGATGTTTCAGGTTATGCTAATTAAACTAGTTGCATCTGTTAGTTTATGTTTTGATCACCAATTGCTTGAGTATATGC CAATAAGGATACTTATTTGTAGTTTGTTTTGATCAACAGGTGAAATGGCTTTGCTGGCTGAAGGTATGTGTCCCGGGGGT GAAGACACAACCATAGAAGAGTACATAGTTTCCCCTGCTATTGAGAGCATTTCAATCAAGGAAGCAGGGAAGGATTGCAT AAAGCTCTATGGAGCTAACCAAGGAGTTTCAATGATTGCTCAGCCAGTGAGTGGACAAGGTAGCATGATATCACGAAGTA TGTTAACTTTGTCGCGCCAGGGAAGCGTTCTTGCCCAGGCAGCTTCTAATCTCAAGGACCCTATGGTCAATCTCTTTGGG AGCATGCATGATGCTAACCTTCCTCCTGAGTTGTTTGGAAGTTCAAGAGGTAGCATGATAATTCCCAAAGTGCCTAGTGT TTCCAGCATGGGAGCAGATCATGATCAGAGCCCTTTTGGTACTAGTGACAATCTCCATGCGCCATTGCTCAATGCTATTG ATAAGGCTTTTGAATCTAAGGACATGTCAGGCATGAGTAGCAATAGCAACTTGAGAGGTAACATGGGGTTGGCTCAGGGT AGTGCTGGAGAAATACCTAAAAACACAAATATTGGTGGAGGTTGGCAATTGGTTTATAAATCAGTTGATCAAACAACAGG GGGTGGGAAAAAAGAAGGAGGAGGAGGGCTACAAAGGGTTTATCTACATGCAGATCCTACCACAATGTCTCGGGAGCAAA GTTCACTTGCTTCAATTTCGGGTTATGACTTGCATGAAGAAGGTGGTGGTGAAGCTTTTCAGGCGTCTGCACTCGTCAGT CGTTCAATTCTCTATACTAAGGATATGACAACCAAACCACAAGCTCCTCCAAAGCGTGTAGGTTGGGGAGCTTTGCTAGA ACCAGGAGTGAAACGTGCATTGATTGTGGGAGTAGGACTTCAAATTCTCCAGCAGGTACACCTAGATGTACTAATTGGCT TGTAGAGAACTAGATTCGGTTTCCCTGCCATAAGGAATTCCTTGCATACACACATTCATGAAATTTAGGCCGATCGATCA AGATCAGCCGATTCATATATAATTTAAGCTGGCCAATCTTGATCAGACAGTCCACATTGTGTGCTTTTGTAAATGTGGCT TTTCCTTGATTGCAAGGAATCCATTTCCCAATTTGTAACTATGCGTAATAAGGTTTGTAACTTACACTGAAGTTTGTAAC GAGACATGTTACAAATTATGTGATAAGCTGCAGTATTTTTTACACGTAGTTATGAACTAAACTCAATAAGTTAAAAGCAG TGTGCCAATAGGTGGTGTATGGCACCATGCCCCTTACTAACTAGTATTTCAATACCAGTGTAATTTCCTGTTTTTCTATT GATGAACTTGATATCTTTATGGTGTAAACTTGATCATTGTGCACTCTATATTGAATAAGGAGTTAACTCAATAGACTTTG GAATGGGGCAACCTCATATGCCTCTAAACTTTCTTCACCAAAAATAAAATAAATAATCTAAATTCTTCTTATTTTAAAAT ATTAGGCCCTGTAATTACTCTATACAACAATGCTCCTAGGACTTAAGTTCTTGGCCATATGATGAGTATGAGGACATATT GTTTATTGCAGGTGTTAGTTTCGTCACATTTTAAACATGCAATATCTAAGGATATATATATATATATATATATATATATA TATATATATATATATATATATATATATTGTTAGGAAATTTGAAATTGCATAATTTTTGCGGTTGTATTTCTTGAACACAA TTACTTCTAATCTTCGATTCTAAAAATGTAATTTATGTTGCAGGCTTCTGGCATAAATGGATTTCTATACTATGCTCCCC AGATTCTTGAGGAAGCAGGAGTAGGGGCACTTTTGTCAAATTTGGGCATTAGTTCAACATCCGCTACACTACTCGTAAAT GTCATCACAACATTCTCCATGCTTCCTTGTATAGCTATTTCCATGAGGCTAATGGATGTTGCAGGAAGGAGGTATATATG TTTATACTGAGACATAGCTTGAATTTCCTTTAGTCTTGTATCCGTTCCCTGCATAAAATGTGTAGACTTTATACAAAGCT ACAACTTCCACAAGGTTCACTAATATATCCATTTCTTTTTAGAATCTAAATATTCTCCTCCTATTGCAACATGGATCAAG ATCTTCTGTGCTAAAATGATATCCTAATTTTCTGTCCCACCAATGAAATCTTGTCATGTCAATTTAAGTGAGGCAGTTAG AAACTAATATGATGGTTCTAATTTACATGTGAAGATTTCATTGGTCACAGAGTTGAGACACCATTTCACACAAAAGATTT TAATCTGTGCAACATATGCTTGTAAAAGGATCAAAATCCCCTGCCTCAAATATTGTCTCATTCATTTTCCCATCAATGAA AGTGTGCAATGTCAATTAAAAATTACATGTGTAAGGTTATAAATGTCATATCCATGTATTTTTAAATTGTCATAGCATAA TTTCATTAGTTCAGCCAAAAAATATGACATTATTTAGGGATAGAGGATCTCGATTCCTTGTTAAACTATTTCTCTCCACA ATTTGTTTCATGTGTGCCTCTCAAACAATAAAATGTGACAATAATGAGAGTGCAATTACTTATTTTCTCATGGCAGGTCA ATACTTCTATACACAGTACCAATTTTGATAGTGTCTCTCATGGTACTAGTACTCCGAGACTTGTTTCGCATGAGTCCTAT CCTCAATGCAGCTATCACTGCTGTAAGTGTTATGGTATACGAAAGCTGCTTCTGCATGGGCCTTGGTGTGATTCCAAACA TCTTATGTTCTGAAATCTTTCCAACAAGTGTTCGCGGAATCTGCATTTCTATATGTTCCCTTACATACTGGATCAGCACC TTGATCATCACTTCTATGTTCCCCTTTTTGCTCAATCTTCTGGGTCTTACTGGGGTCTTTGGTTTATTTGTTGTTGGGTG CATCGTGACATGGATTTTTGTCTACTTAAAAGTTCCTGAAACAAAAGGCATGCCTTTAGAGGTCATCATTGAGTTCTTTG CTATTGGTGCAAAGCCTGAAACATCTTGATCCAATAGCTACTATGGGAAGCATAAGATTGAATACAAATGTAAAGAAAAT TATCATCACCAGAAGCAAAAGAAGTAAAGGAAGCAGCAACATTTACATTTTACCATTGATGAATTTTGAGGTTTAGTTGG TTTTATTTTCCAATCCAGTTTGAGTTGAAATTTTGTTGTTGGTGGAATGATTGAAACCATGCGATGTTTGATTGGTTCCG AGATTTTAGAGATTAGAAGCGAGTCCAAATTTGAGGTTCTGCCTCATAAGTGAAAGTCTACACTACACATCCAAAAACAC ACTGAACACATATCAATAAGTTTCTAGTTTTGTCCTTTGAAAAGAAGAGAGTACAATCTAAAATTTAGCTTGACATAATG TAATTAGAGCTAGAGAATCAATGTTCCAAGTTGTGATATTTTTTAAGCACATTTTGAGTTCTGAACAGCATATCCCCACA GTGGTGTATTCTTCAATAAATGTATCATGGGGTGAGTAGTACATATTATAAAACTATTTGCATTCTGAAATATTTATGCA CTTATTCAA
CDS sequence (LotjaGi4g1v0138900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGAGGTTGTGATCATTTCAATTGCTGCTACTCTTGGGAGTCTGCTTGTTGGATGGGATAGTTCAACCATTGCAGG GGGCATGAGTTACATAAAAAAAGAATTTAACTTGGGGACATATCCCACACTTGAGGGGCTAATTGTGTCCATGTCCTTTC TCACCGGCACCTTTGTGACAATATTCTCCGGGACAGTTTCCGACATGTTCGGAAGGCGACCAATGTTGATAACATCATCG GTTATGTTTTTCCTCAGTGGTTTGGTGATGATGTGGGCTCCTAATGTCTCTGTAGTTCTGTTCTCAAGGCTGTTGGATGG AGTTGCCATTGCACTAGCCATAACTCTCACTCCTCTCTACATATCTGAGATAGCGCCGCCGGATATCCGAGGCACGCTGA ACACGCTGCCGCAATTTTCGTGCTCTGGGGGAATGTTTGTTGCATACATCATGGTGTTCTCCATGTCCTTGATGGACTCA CCAAGTTGGAGGGCCATGCTTGGTGTTGTTTCGGTTCCTTCCATTGCATACTTTCTTCTCGCCGTGTTTTATCTTCCGGA ATCTCCTCCATGGCTTGTAAGTAAAGGAAGACTTACTGAGGCTACCAAAGTTCTTCAAAGGATTCGCGGCGTGGAAGATG TTTCAGGTGAAATGGCTTTGCTGGCTGAAGGTATGTGTCCCGGGGGTGAAGACACAACCATAGAAGAGTACATAGTTTCC CCTGCTATTGAGAGCATTTCAATCAAGGAAGCAGGGAAGGATTGCATAAAGCTCTATGGAGCTAACCAAGGAGTTTCAAT GATTGCTCAGCCAGTGAGTGGACAAGGTAGCATGATATCACGAAGTATGTTAACTTTGTCGCGCCAGGGAAGCGTTCTTG CCCAGGCAGCTTCTAATCTCAAGGACCCTATGGTCAATCTCTTTGGGAGCATGCATGATGCTAACCTTCCTCCTGAGTTG TTTGGAAGTTCAAGAGGTAGCATGATAATTCCCAAAGTGCCTAGTGTTTCCAGCATGGGAGCAGATCATGATCAGAGCCC TTTTGGTACTAGTGACAATCTCCATGCGCCATTGCTCAATGCTATTGATAAGGCTTTTGAATCTAAGGACATGTCAGGCA TGAGTAGCAATAGCAACTTGAGAGGTAACATGGGGTTGGCTCAGGGTAGTGCTGGAGAAATACCTAAAAACACAAATATT GGTGGAGGTTGGCAATTGGTTTATAAATCAGTTGATCAAACAACAGGGGGTGGGAAAAAAGAAGGAGGAGGAGGGCTACA AAGGGTTTATCTACATGCAGATCCTACCACAATGTCTCGGGAGCAAAGTTCACTTGCTTCAATTTCGGGTTATGACTTGC ATGAAGAAGGTGGTGGTGAAGCTTTTCAGGCGTCTGCACTCGTCAGTCGTTCAATTCTCTATACTAAGGATATGACAACC AAACCACAAGCTCCTCCAAAGCGTGTAGGTTGGGGAGCTTTGCTAGAACCAGGAGTGAAACGTGCATTGATTGTGGGAGT AGGACTTCAAATTCTCCAGCAGGCTTCTGGCATAAATGGATTTCTATACTATGCTCCCCAGATTCTTGAGGAAGCAGGAG TAGGGGCACTTTTGTCAAATTTGGGCATTAGTTCAACATCCGCTACACTACTCGTAAATGTCATCACAACATTCTCCATG CTTCCTTGTATAGCTATTTCCATGAGGCTAATGGATGTTGCAGGAAGGAGGTCAATACTTCTATACACAGTACCAATTTT GATAGTGTCTCTCATGGTACTAGTACTCCGAGACTTGTTTCGCATGAGTCCTATCCTCAATGCAGCTATCACTGCTGTAA GTGTTATGGTATACGAAAGCTGCTTCTGCATGGGCCTTGGTGTGATTCCAAACATCTTATGTTCTGAAATCTTTCCAACA AGTGTTCGCGGAATCTGCATTTCTATATGTTCCCTTACATACTGGATCAGCACCTTGATCATCACTTCTATGTTCCCCTT TTTGCTCAATCTTCTGGGTCTTACTGGGGTCTTTGGTTTATTTGTTGTTGGGTGCATCGTGACATGGATTTTTGTCTACT TAAAAGTTCCTGAAACAAAAGGCATGCCTTTAGAGGTCATCATTGAGTTCTTTGCTATTGGTGCAAAGCCTGAAACATCT TGA
Protein sequence (LotjaGi4g1v0138900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MREVVIISIAATLGSLLVGWDSSTIAGGMSYIKKEFNLGTYPTLEGLIVSMSFLTGTFVTIFSGTVSDMFGRRPMLITSS VMFFLSGLVMMWAPNVSVVLFSRLLDGVAIALAITLTPLYISEIAPPDIRGTLNTLPQFSCSGGMFVAYIMVFSMSLMDS PSWRAMLGVVSVPSIAYFLLAVFYLPESPPWLVSKGRLTEATKVLQRIRGVEDVSGEMALLAEGMCPGGEDTTIEEYIVS PAIESISIKEAGKDCIKLYGANQGVSMIAQPVSGQGSMISRSMLTLSRQGSVLAQAASNLKDPMVNLFGSMHDANLPPEL FGSSRGSMIIPKVPSVSSMGADHDQSPFGTSDNLHAPLLNAIDKAFESKDMSGMSSNSNLRGNMGLAQGSAGEIPKNTNI GGGWQLVYKSVDQTTGGGKKEGGGGLQRVYLHADPTTMSREQSSLASISGYDLHEEGGGEAFQASALVSRSILYTKDMTT KPQAPPKRVGWGALLEPGVKRALIVGVGLQILQQASGINGFLYYAPQILEEAGVGALLSNLGISSTSATLLVNVITTFSM LPCIAISMRLMDVAGRRSILLYTVPILIVSLMVLVLRDLFRMSPILNAAITAVSVMVYESCFCMGLGVIPNILCSEIFPT SVRGICISICSLTYWISTLIITSMFPFLLNLLGLTGVFGLFVVGCIVTWIFVYLKVPETKGMPLEVIIEFFAIGAKPETS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 3 | 3 | - | – | |
Gene3D | 1 | 252 | 252 | 1.5E-55 | – | |
Phobius | 1 | 19 | 19 | - | – | |
PANTHER | 2 | 717 | 716 | 3.9E-299 | – | |
PANTHER | 2 | 717 | 716 | 3.9E-299 | – | |
TMHMM | 4 | 26 | 23 | - | – | |
Phobius | 4 | 14 | 11 | - | – | |
SUPERFAMILY | 7 | 705 | 699 | 3.79E-56 | ||
ProSiteProfiles | 7 | 700 | 694 | 33.815 | ||
Pfam | 9 | 219 | 211 | 1.3E-48 | ||
CDD | 10 | 193 | 184 | 2.61259E-51 | – | |
PRINTS | 15 | 25 | 11 | 1.3E-11 | ||
Phobius | 15 | 19 | 5 | - | – | |
Phobius | 20 | 42 | 23 | - | – | |
TMHMM | 38 | 60 | 23 | - | – | |
Phobius | 43 | 63 | 21 | - | – | |
ProSitePatterns | 63 | 80 | 18 | - | ||
Phobius | 64 | 74 | 11 | - | – | |
TMHMM | 75 | 92 | 18 | - | – | |
Phobius | 75 | 94 | 20 | - | – | |
Phobius | 95 | 99 | 5 | - | – | |
TMHMM | 99 | 121 | 23 | - | – | |
Phobius | 100 | 121 | 22 | - | – | |
PRINTS | 100 | 119 | 20 | 1.3E-11 | ||
Phobius | 122 | 132 | 11 | - | – | |
Phobius | 133 | 153 | 21 | - | – | |
TMHMM | 136 | 158 | 23 | - | – | |
Phobius | 154 | 164 | 11 | - | – | |
TMHMM | 165 | 187 | 23 | - | – | |
Phobius | 165 | 185 | 21 | - | – | |
Phobius | 186 | 501 | 316 | - | – | |
Gene3D | 440 | 713 | 274 | 1.5E-48 | – | |
Pfam | 467 | 708 | 242 | 9.8E-38 | ||
CDD | 501 | 698 | 198 | 2.63898E-51 | – | |
Phobius | 502 | 525 | 24 | - | – | |
PRINTS | 513 | 523 | 11 | 1.3E-11 | ||
Phobius | 526 | 544 | 19 | - | – | |
TMHMM | 543 | 565 | 23 | - | – | |
Phobius | 545 | 567 | 23 | - | – | |
ProSitePatterns | 567 | 583 | 17 | - | ||
Phobius | 568 | 578 | 11 | - | – | |
TMHMM | 578 | 600 | 23 | - | – | |
Phobius | 579 | 596 | 18 | - | – | |
Phobius | 597 | 607 | 11 | - | – | |
Phobius | 608 | 633 | 26 | - | – | |
TMHMM | 610 | 632 | 23 | - | – | |
PRINTS | 612 | 633 | 22 | 1.3E-11 | ||
Phobius | 634 | 644 | 11 | - | – | |
PRINTS | 635 | 647 | 13 | 1.3E-11 | ||
TMHMM | 645 | 667 | 23 | - | – | |
Phobius | 645 | 665 | 21 | - | – | |
Phobius | 666 | 670 | 5 | - | – | |
Phobius | 671 | 694 | 24 | - | – | |
TMHMM | 671 | 693 | 23 | - | – | |
Phobius | 695 | 720 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0138900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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