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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0176800 |
| Transcript ID | LotjaGi4g1v0176800.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT1G10430.1 protein phosphatase 2A-2; Swiss-Prot: sp|Q9ZSE4|PP2A_HEVBR Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|Q9MB06|Q9MB06_VICFA Serine/threonine-protein phosphatase; Found in the gene: LotjaGi4g1v0176800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:35937078..35941832) extracted from Lotus japonicus Gifu genome v1.2.
TTGAGTTTCATTTCTATTTAGTTTCTGTGAGGCTGGCAGGCTTTCTACCCTAATCATTCGAGTAATCCACAAATAAGGTA ATTTTTTATGTCTTACATTTTTATTTTTATTTTTTTCTTAAATATTTGATTGTCTTGTTGTTGTTGTTCCCGTCTCACTG AGAAACACAAAACTGTAGAGACGAAAGAGAAAACTGGGGGAATGATTGGGAGACCTAAACCATCAACGCCATCTCCTAAA CGGTGCGTTTCGCTCTCTTCGCTTTGCCTCTGAACCTAACCCTAACCCTACATTTTTCCGGTCGCCGTCAACGACGAAAC CAGTAACCGTTCGATTTCATAGATTCGGCGATTCGAGATCAGATCGGTCTGGGTGGTGGAAACGATGCCGTCTCACGCGG ATCTGGACCGTCAAATCGAGCACCTGATGGAGTGCAAGCCTCTGCCGGAGCAAGAGGTGAAGGCGCTGTGCGATCAGGCG AGGGCGATTCTTGTTGAGGAGTGGAACGTGCAACCGGTCAAGTGCCCCGTCACGGTTTGCGGCGATATTCACGGCCAGTT CTACGATCTCATCGAGTTGTTTCGGATAGGAGGGAGCGCCCCTGATACCAATTACCTATTTATGGGTGATTATGTAGGTG AGTTTTTTTCTATTAGTGCTCAAAGATTGGATTTTTATTCGCTCTTTAGGTTAACCTTATTTGTAATTTGTAATTGAAAT TGAATTTTTATTAGCTAGATCTTGGTATGAGTGCGTAGTTATTAATGGAGAAATGCTGAGATATGAATGTTAGTGTTGTA AATGGAGTTAATTTGATTGTTGTAGTTTTCTATGTAATTTTTTTTCTGTATATATCTGAAGAAGTGAAGCATTGTTCCTC AAACTGCTGATGGACAAATGAAAATTTAAATTTGTATATTTTTAGGACATGTATCAGTGAGGAGTGAAACTCTCTGATGC CCACGGACAGTTCTTTGATATTTTGATGAGAACATACAAAAGTAGCACATTTGGTCGTTCTGTTTGAGCTTACATTTAAG CATCCAAACTGGGTGTGATATTAATTCCCCTCCTCCACAAAAAAAAAAGAGAAACTTGGTACTTTTTGAGTTTTGAAAGA TACAATTCTTTTGGCTTTTCTAATTTCTTATGGAAACTAAATTACGCCTCTAAGGAAAAGTTGTTTAGCTTTATTCTCCT ATCCTCTAAAATTTCATAGAAGGACGTCAGGCTTACAAACTCTTATGGTATGGAGACATTAAAAAATTCATATATAATAA GGTGCTGCCCTCTGAATCGCCAATACACGATTTTCTTTGACACTTTCTACGTTGGATACGTGTCTGATACCAGTATATGC TTGGATACATAACCAAAGCATATTTGTGACGTTCCAAAGCCAGTTTCTTAAAAGAATATTGTCTAAATTCTGTACGGCCT GGATACTTCTACGATATTTATTCTAAAACATGACTCTTCTAATCTTTTCTCCTTTGCCTATATCTTTGAACCAAACCAGC ATTCCAGCATAACGTGTAGCAAAATCTCATCTATAACATCTTTACAGATGGTGCTCAAGAAGTGGATGGGATTTATATTG TTCCTGTCTGTAGGCAATAGTAATGATTTCTGCTGATATTGGTTTATAATTTCTCCTTTGTATTTTGTAATGTTTGCAAA GTATATAAATAGTTAGATTTTATTGAATTGTATTTATGTATTTATTATGTTTTATAATTTTTAATGCATATCTATATATT TATCCTTGATGTATGCTATATTTTTTCAAGAAGTATCCCATACCATTTGACGGATTTGTATTTTTATCTGCCGCATCGTT ATTCACGCATAATTATTATCTTTGGTTTTTATCATCTCTCCTTTGTGATACGGCTTTTAATGATTTTCAAATTATTAAGG TCATGCCAAACTGCTGGAATTTTCTCATGACATTGGTTAATTAATGCAGATCGTGGGTACTATTCAGTGGAGACTGTTTC ACTTCTGGTGGCCTTGAAAGTCCGTTACAGAGATAGAATTACATTAACCAGGGGAAATCATGAAAGCCGTCAAATTACTC AAGTGTATGAGTTCTTCTTATTCTAAGTTTTGTAAGGTCTATCATGTTTAAACTGAAGATTTAATATTCAGCGTAAAATT TTGAAAAGAGGTCATGGGTTTTGCAGCCCCAATGCCTCTAAATAGTGGGCTTTGCTTACGCTATAGAGTTCACTTGTCTG TGCACCATCTTTCCAGAGGGTAACATTGAAGGGCTTAAGAGCAACAATCTGGTTTTGTAATGGGACAGGCCATAATTCTC TTGGTTTGCCTTATCATTATGCTGACTTGATATTTAATTCTAGGGTATTGAATTAGAATTATAAGATTAAGATGATATAT ATACTTTGTCGCTTTGAGGCGCTGTCTATCATATGCTGAGGGTGCTATGTTACATATTTTCCGTAACTTTAAGAATGTTC CATATTGTTTCACAGTTATGTGTGACAGAATGATGTATTGTTTCACATTTTAAGAGGCGCATTTGAATGATGCCTGTTAA GAGTTAACTGTACTGATTCATCAATGGTTTGACAGAAATGTAAAATGACAAGAAACAAAATGTCTATGGACAAAAGATTT TTCTAATTTATAGATGTTTGTATGTATTTCCATGCAATTTCATCAATATCTTTCACCTTCTGCTTTCAGGTACGGCTTCT ATGATGAGTGCTTGAGAAAATACGGAAATGCGAATGTCTGGAAATACTTTACTGACTTGTTTGATTATTTACCTCTGACT GCCCTTATTGAGAGTCAGGTTTGAGTTCAATATATTGCAGAGTATTCATCTGAGTAATTTTATCCAAACCTTTAACTTCC TTGTATGTTTCAGATTTTCTGCTTGCATGGAGGTCTCTCACCTTCGTTGGATACACTGGATAACATCAGAGCATTGGATC GTATACAGGAGGTCTGTGTGTAATGGCTAGCATGAATGTTCTGCATGGTCTCATGATCCATTTGATATTAAGAACATTTT TCATGTGAAAAATTGTATCTTGAGCGAGATATACATCTATTGTTTAATATGGTTTGAGAAATATTTAATTTTATGATGCA TTTGTGCTTTGTAATACTCTTGTTTTGCTCTGGAATTTTTTTATTTCGGACCTACAATAAATAAAAGATTTTTCTTTCTT TTTAGTTTACTGAAATTTTAATACGTTGTTGGCCTTGACAGGTTTATTAGGCTTTTAGGCTGTCTCTTCTTTTAGACCAA AATTGAATGCCACTCCTTAACATTTGTACTGTCAATACAGTTTATGAGGTTAATTGGGTGCGAGGGATTTGTTGCACCTA TGTTGCCTAACAATCGTACTTGTGCATTACAGGTTCCGCATGAAGGACCGATGTGTGATCTCTTGTGGTCTGATCCTGAT GATCGGTGTGGGTGGGGAATATCTCCACGTGGTGCTGGATACACATTTGGACAGGATATAGCTGCTCAGTTCAATCATAC CAATGGTCTCTCTCTGATATCTAGAGCTCACCAGCTTGTTATGGAAGGATACAATTGGTGCCAGGTGACTGACAAATATA TTTAACGACTATAATTATCATTTTCTGCATTGGGAGTACCTTTGGATTATATATAATGTATTATGTATTGACTTATGCTG ATTACTCTATTAGGAGAAGAATGTGGTGACTGTATTTAGTGCTCCAAATTACTGTTACCGATGTGGGAATATGGCTGCCA TACTGGAAATTGGAGAGAATATGGATCAGAATTTTCTTCAGTTTGATCCTGCTCCCAGGCAAATTGAGCCTGACACTACG CGCAAGACCCCAGATTATTTTTTGTAACTTCATATATATGCCTATGTGTAGTTACTGCTTTCTGCCGTTACTGTAGATGT GTCTTCAAGGAAAAGGAGTTTCATTGTTTTAAGAGGAGGGTGGTCATCAACATAATTCTTTGTTTTTGGAGTTTATCTAA TGCTGCTGCCTTATTTGCACAAGAAACCAATAGGAGAACTGACACAAGCAACTAATTGGTGTTGTATATTTTTGAGAGGA GGAAGCGGCGATATAACATGGTATATCTTGTTTTGTGATTTTTTTCCCTTGAATTAAATCTCTAGTTAGAGAGCAGATTT TGTGTCCTGACAATGATGTGCTGAGACTTTTGAACGGTGCTGGTGTTCTTTTTACATTACTATATCTTGGTAAATGTTAA GTTGGGGTGATGAATTGAGACTCAGAAAATTAGGAACCTCGAAGACTTATAATTTGAACCAAAAGAGTTTGTCAAATCGT GGTTTAAGGTTAAGAAGATATGTTAGATTTAATATATTTTATATTTTAAAGCTGTCAGAAGTATTCAAAACCAGTAGTGT AAAATTCAGCTTGAACCAGCTGATTTATCTTAATTCGTGGATATTTTTCCTCTTGTAACAAAAAAAAATTTTAATTCGTG CAAACTGCTGAACTGGCCTGGATACTAGTCTGAGCAATCCAATCAATGCAAACCATCTCGATCTGTTACCAGATGGCCTT GGGTTTGAACCAACCGGAGTCATTCAACCAAAAAGATATGAACAATATGGGTTGAGTGCTTAAGAACTGGTATTGAATTA TGAATCTGAAATTTAGTTTTGTCGCTCAATTACACAGATCGGCTAGCTCCTTTCCGTTTGTCGCTTGCAGCTCGTCACTC ATGCTCCTATATCTTTCACGTCTGGTTAATTGCCC
CDS sequence (LotjaGi4g1v0176800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTCTCACGCGGATCTGGACCGTCAAATCGAGCACCTGATGGAGTGCAAGCCTCTGCCGGAGCAAGAGGTGAAGGC GCTGTGCGATCAGGCGAGGGCGATTCTTGTTGAGGAGTGGAACGTGCAACCGGTCAAGTGCCCCGTCACGGTTTGCGGCG ATATTCACGGCCAGTTCTACGATCTCATCGAGTTGTTTCGGATAGGAGGGAGCGCCCCTGATACCAATTACCTATTTATG GGTGATTATGTAGATCGTGGGTACTATTCAGTGGAGACTGTTTCACTTCTGGTGGCCTTGAAAGTCCGTTACAGAGATAG AATTACATTAACCAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTACGGCTTCTATGATGAGTGCTTGAGAAAAT ACGGAAATGCGAATGTCTGGAAATACTTTACTGACTTGTTTGATTATTTACCTCTGACTGCCCTTATTGAGAGTCAGATT TTCTGCTTGCATGGAGGTCTCTCACCTTCGTTGGATACACTGGATAACATCAGAGCATTGGATCGTATACAGGAGGTTCC GCATGAAGGACCGATGTGTGATCTCTTGTGGTCTGATCCTGATGATCGGTGTGGGTGGGGAATATCTCCACGTGGTGCTG GATACACATTTGGACAGGATATAGCTGCTCAGTTCAATCATACCAATGGTCTCTCTCTGATATCTAGAGCTCACCAGCTT GTTATGGAAGGATACAATTGGTGCCAGGAGAAGAATGTGGTGACTGTATTTAGTGCTCCAAATTACTGTTACCGATGTGG GAATATGGCTGCCATACTGGAAATTGGAGAGAATATGGATCAGAATTTTCTTCAGTTTGATCCTGCTCCCAGGCAAATTG AGCCTGACACTACGCGCAAGACCCCAGATTATTTTTTGTAA
Protein sequence (LotjaGi4g1v0176800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSHADLDRQIEHLMECKPLPEQEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFM GDYVDRGYYSVETVSLLVALKVRYRDRITLTRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQI FCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQL VMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 306 | 306 | 8.0E-220 | – | |
| PANTHER | 1 | 306 | 306 | 8.0E-220 | – | |
| Gene3D | 2 | 303 | 302 | 3.0E-130 | ||
| CDD | 6 | 290 | 285 | 0.0 | – | |
| SUPERFAMILY | 6 | 293 | 288 | 5.45E-117 | – | |
| SMART | 20 | 290 | 271 | 2.1E-151 | ||
| Pfam | 48 | 239 | 192 | 5.0E-36 | ||
| PRINTS | 48 | 75 | 28 | 7.8E-91 | ||
| PRINTS | 77 | 104 | 28 | 7.8E-91 | ||
| PRINTS | 110 | 134 | 25 | 7.8E-91 | ||
| PRINTS | 145 | 171 | 27 | 7.8E-91 | ||
| PRINTS | 174 | 201 | 28 | 7.8E-91 | ||
| PRINTS | 230 | 250 | 21 | 7.8E-91 | ||
| PRINTS | 252 | 268 | 17 | 7.8E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0176800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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