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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0224600 |
| Transcript ID | LotjaGi4g1v0224600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2H2-like zinc finger protein; TAIR: AT5G63280.1 C2H2-like zinc finger protein; Swiss-Prot: sp|Q8SUH6|ZA15_ENCCU Zinc finger C2H2 protein ECU10_0150; TrEMBL-Plants: tr|I1LW13|I1LW13_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0224600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:53035622..53043590) extracted from Lotus japonicus Gifu genome v1.2.
GAAAATCATATTTCACATAAAGACTTATTAATAATGATAATTTTTAAATTATATATAAACTATTTTCCTAATGATAAAAA ATAAAAAATTTAACAGGTTTACGAAGGTTCTCTTGTTTCCCGAGTGCGACTTTCCAAGCCCAGAAATTCCAGAAACTTTT CGCGTTTTTGTCTTCGTTTTTACCGAAAAAGAGCCCAAAGTTTCAACAGAGAGTAACGGATGAAGAAGCTCACTGCAATT GTTTCAACTTTCTCGATCTTAATACTTTGTTTTCAAATGCTCCTCCATGTTCATTCGATACCTCTCTTATTAGGAAACCA GGTAATGGCGTGTGCCTTCAAATCAACGAAAACTGCATTATTTGTATTTGAGATTAGCATGGGATTGTGTTTCTTAGCTT CAATATATGAAGAATCGAGGTTTAGTTTTTGGTTGCTGAATGAATTTGCAATAAACAAATAGCTTCACAACTAAGAATAT TGAGTTTGCGATTTGGAAAATGGAATAGTGAAACTTTTAGGGTTCAAGTTCAGTGTTAGGTTATAAATTGCTGACCTTAC ATTTCACTTAAGCTTGATTTCTATTGCCGAAAATTCCCATGTTAACGCTTGTTTTCTTCCATTTCTCTCTTGAACTGTTT GTCCAGGTTGATGAGGAATCTTCTGGTCGAAGGTACCGGAATGGATGCACAATTTGTTCATTGTGAATTAAATTAATCCT TCATTCAAATATCGAAATGGCTTTCTATGATGATATCTAGCTTTTATTTCTTGTTGTTATAAGCTAGGAATATAACTTAG CTGTCTTTCTTGTTGTAGGAATCTTAAACAGGAACCGGAGCATACTCGTGAAGTGCATTGCTCTAGAGAGAGAAGTAGGG TAGCATCGAAAGTAATAGAGGAGGTATTGTAAATTTATGACATTTGCAGTATGAAATGTAAAATTTGAATCACATCATCG AAGAACATTTTTTGAAATATTTTAGTGTCTTGGATCAGTGTTATTGGATAGGTCTAGTCTCTAGTGTGTCATGTAAACAC AGTAGTTAGGAAATGATATCTCTGTATTTACATTCATTACATAAATATTGAGTTTGAGATGTAGTTATATTTCAGCACAT GCGTCTCGTTTCTCTTTCTCATCAAATACTTTTCTTATTTATGTTTCTGTAGTATTTGACACCATTTGTGGAAAAAGAAA ACTATCAGCTTTCAAGAAAGTGCAGACTTCACCCTGAGAATGATATGTTCAGGGATCAAGAAGAGAATAAAATTTACATA GACTATCATGAGTGGCGATGTGGATATTGTAAGAAAAGCTTCCGTGAGGAAAAATTTCTTGATCAGCATTTTGATAACAG ACACTACAATCTTCTGAATGCAGTAAGTTAGTTCTCATTCATTTCTCACTCTGTAGTGTATGGAGTACACATAATCTGCA GTCCAAGCTTTAGTTTCATCAGTGATGAGTTTAAAGTTCTAAAATGCTCTTGTCACCCCTTTTCCAATTTTGTATGTTCA GCTTATAAAGTGCATTTTTTCTATTTTTTCGAAGTTTTTGTTTTTGTAATTGCGTGATAAGGTCAATATCCAACATATAG ATAGCCCAAGAGTCTTGAGGCTATCTGATTTTGCACAGTGAACTCAGTTTACTGTCTTCATGTTGGCTGATAGAAGGGTC ACTAACAGGGCCCAACCTCAGAAGTTTCCTTAAATTTTTGTTTTTTGCAACAGACATAATTTTATAAGAAAGGGATTAGC CCTCGTAATGGTTGGAGACTCGGAGCTAGGTTGCCACTTTTATATATGTAATTTTATATTTGGCCTCCCAAAGTTAAATT AGTCCTTGGCTTCTGTCCCAATAGAATAAACAATCCAATCCTAGTATTTCTTACTGCATATCATCATTTTGGTGGTAATT TTAATATTGGAGGTGGAATCAATAGAATCAAAAGAGACCTGTTAGAAGATTGAATCAGTTTTTGAGTACTTCAAATATAC GGGCAGTTCTATTTAATTTTATAGTACTAATCAGAAAATGTTGGTTTCCATAATTCCGCTACTTGTTTGATGAATTTAAA TACAGAGTGATGGGAAGTGCTTGGCTGGTTTGTGTGGGGCATTGCATTGTGATGCTGTAATGAATTCCAAGTCCTCTAGA TGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCTTCACCTATGTGAGGTTGCTTTGACTATTTTTTTCTCTATTTGCTT TTACTTTCAATGTAACCCTATCGTTCTACCTAATCTGTACGCACTGATTTTTCAGAGTCTTGCTGACAGTTGTTTTCCTA TAAGCGAGGGTCCATCAGCAAGCCGCCTTCATGGTATACTTGAATTTTCTCTTGCAGTTAACTCAATCCTTATGGTGCAA CCACCGTGATTCTTGTCACTTTTTTTGTAAAACTTTTTTTAATTTTTTCTCTTTGTTGACTTATTTCTTATGATGATTTC CTGTTGCGTAGAATTGTTTCTGCACCAATTTTGTGATGCTCACACCTGCTCAGGGAAACATAAACCGTTCTCTAGAGGAG GCAAGGTACGACCTGATTATCTCACTGTGGTAATTTATTATCAACAATGTGCCTTATTAGAAGTCTGTGATTGCTTCAGC TATATAGGGATATGTATACTTTCGCTCCTAGATGATGTGTTTTGAGGTTTTAGGCCTTGTGCTATTCAGTATTCATGAAG ACTCTGGGAAAAAGCCTAATTGACATCACTTTAATCCTTGGTTGTAGCAGCCTAGCTTAAATTATCATCTAAGGTCAAAC ATGTAGTCATAGCACATTTCCCTTTCTATAGGAAGGTTTTAGAATTTTTTTAGCATTAGCTTTTTGTCTTTTCATCTAAG TTCAAACATGCAGTCACAGGCTCACAGTACCTTCCTTTTTTATAATTTTGTAGTCATTAGTTTTTTGTCTTTTCAATTAT TTATGTACCATTTCTTAAGATTTTAGTTTCATTATATTTAATTTATTACTACTATTTATCAATCCTGATATATTGCTTCT GCAGGTTCAAGTAAGTTTCTTCCGCCTAGCTGCTGGAGCATTGATCTTAGTGCTACTTCCTGTGTTCTATCTTTTTCTTT ATTTGGTTCAAAGGTGCAATTTTAGTATTTTTGAATGCTATTTAACAAATCAAGGTTTTACACCAATATCTCATAATGCT GTTATTGGGCAAGTTTCAGTGATATGAAGAGTCGAACTCAAGAGCTTCGTCGCATCCCAAAAAGAGGGAAAGCAAAGCCA TCATGATTGGTAACGTATGTCTCTTTTAAGTTGGAATTTCTTGTTACATGGCAGAACGAGCTGAAATAACCACAAAATTG CCATTAAATAACAATGGATTCATTTCATGTTGGTTGTATGTTTAATTTTATGATCCTATTGTCAAAGCTATTTTCATCAT TTGTTGCAAGTTTTAAATGTAATCTCACTTTCTGTCCCCTCTTGATTGGTTTTATATTCTTGCCTTTTCACATTGCTTTA TTCTAAGTCTATGTACGCTATCCAAGTTACATGACCATACGTGATTCAGTTGACATTACATTTTTCTCAAATGAGTGAGA CCAGAATCTTCATATTGCTTTTTTTAATGATTTACCTTTTCTTTTTATGGATTTTAATGATTTACCTTAAGCCTATTTTC ATTATTAAATCCTAGTAGACGTTTGCTTACCAAAAAAAAGGGAAAAAAAAAATCCTAGTAGACGTTTACTTCTTTCATGC ACATTATGGAGGCTTTTTTTTCATTACTGAGCAACATTCTATGACGTAATGTGGTGTTCACTTGGATTATATACCAAGTG AAACTTATGTGCACCATCTGTTTGGTTTCAGTTCTCTAGTTTATTCATTATTTAGTTCTATTCTATGGAACTTCTTTGAT CTGTCCTTTCAGAAGTGCCCTATTCCCTGCTGTCTTCAAAGTTATGCTCCATCTAATTGCTTTTGTATCTAGCAGAACTT TTGACCCTGTCATGTGAAACTCTTGTTACTGCAGACTATAAACTGTTGCTATCATCATCCAGGGTGAATCAGTGAATGGG TTGACAAAGATAGGAAGGTGCATTGCGTAATGTTGATCTTGGCCTTTCCTCCTGGTAGATTTCTTTGCATGTCCGTGTCA ACAAGGAGCAATGGAGAATTACTAGGAGCGCATGAAGGAAATTAAACTTCTCACTGGTCTAAAGTCTTTACACACTTCCC CTGAGGTAGTATGGTGCTTTGTTGTTGAAGGGCACAGAAACATTATTTGATGATCATACACCTTTCGTCCATTACGCCGT GAATGAGGTTATTATTACATGAGCAGTTTATTAGTCCATGTTCCAAGTTTTGCTCAAAATTGTGTAATTGCTCACCTTCT TCAGTTTAAAAACCTCAATCCACCAAGCTTAAGCAGATTCGAGGCCAAACCCATAGAAAGGCTTGTTCTCCTACAACTAT TATTGCAGCCTTGTTTTTTCTAATGGCTTAGAATATGTTTGCAGTTATAACCACTCTTACTGTATGCTGATTGCGTAATT TTTTAATTAGTTCAACTCAAGAGCTCATTGCATTAGGTATGATAGGGTAAGTTCATATAATGAATTAGGATTTTATTAGT TGTTCGGTTTGTATGATATAAGTTTATCCATGGGACTAGACAGCCTGTCCATTGTCGGGAACCAGGACTCTAGAGAAATT ATTTGTGAAATGGACTGTGTTGACTTACCCGCCTCCCTTAGAGGATTATAAAAGTGTGAGGTTACTCCCCGTACTTAATG ACATTAACAAATTGCTTGGGAAGAATTGGAATATAGTTCTTAAGCTTGTGCAAAGAGATTGCAATGCTCTTGCGGATATT TTAGGCAAATTGGGTGTTGCTCGCAATGGTTCATAAAAGTTCATCTGCCTGAGTTGGAGACTTTTGTTGAAAGACTTATT GTCTGTACCTTAGTTTTTTTTGGTATTATTTTCCGAAGTAACAAAAAAAATAATAATTTATCCATGAGATCTTCTATTCA TTAAAATAATGAGTACTTTAATGATGTTTTGACTGACGGAGATAGACTTAGGTTATGATGTGAAAGCTTTCTTTAAGTTT CTTAATGTTAAAAAAATATTTTATTAATTGAATTTAAGTTAATGAAAAATATCCAAAATTAAAAAAAAAATTAGACTATA ATTTTATAAATATATAACTAATGATGAGTTCTTTTTTTGTTGGAAACTAATTATGTGTTTCACAATTTTTAATTGTTTTA ATTTTAATACAAAAAGTCAAAAACACTTTCAAAAAAAAATTTAATACAATAACAAGAAAGGTGATTTATGCCCAACCCAG GTCCACCAGCCCGCTCAAAATCAAGAAGATTCTACTACATTGGACGACATTGACACTTTTATACTGTGGGACCCAAAGTC TGAGTCTACTCCCACAATGGCAGTCATTCCGTCGTGCCTCTGTACGGCATTGCCGTCACCACTTCTCCTCCGCCTCCTCC CGGAAAACTCATCACGGTCACGGTGGTTTCCGCCGGTAAAAGCATGTTTGGTTGCAAAGAGAGGTGGTGATATTCCTCCC ACTGCAGCAGCTTCAGCCATAGCGTACCCTGCTCTCACCTACTCAACCACACTTTACTTCAAATCAACTTACAACGTGAA GATCACAGTGCACGACGACGAGCCTGAAGACAAGCTCATCAATCGCTTCCGGAGAGAGGTCCGGAAGGCCGGTGTGATTC AGGAGTACCGCCGGAGAATGTACTTCGAGAACAAACGGGATAAGATCAAGAGGAAAGCCCGAGAAGCTTCCAGAAGAAAC CGAAAGAGGTAGTTAGGGTTTGATCAATTTTGAATCTGCATTACTTTTTCTTCATTTGTTGTGTATATTCTCTAATGGAT TTCACTTTTCAGGAAACCATGGACAAAATTTCCAGAAGATAATAAAGATGAATCTGGTAAGAAGGGGGAGTTTGATGATG AAGATGATAATTGGGACCTTCCAGATGTAGATATTCCATATTGTTGAAGCTCAAAAGTAGAAGCATGTATATTGTATATA CATCTCTTCCATTAGTTCTGACTTCATTGCCAAATCTCATCACATGAAGCTGGTATTCTCACTTCACTGGTAATTCTCTG TTTCATATAGTAACTATTTACCCCAATTACATGCTTCAAGGAGAGATAGAAAGACATTGCTTAGTATAGGTCTCAAGACA GTGGCTGACTTATATGTGAATAAGTTGTTAATGTGTGTATAAATACTTCTTATTGTAAAGCCATTAGTGTTGCACTATCA GCTTCTATTTTCTCCTAGCTGGACTTCCTCTTGCAAATGGTGTCATGTGCTATAAATTTCACTTTGACCTTTATTGGTCC TGCTTATTGTGCCAGTCATTCAAATGTAGGGGTCAATAAGAGATAATAAACTCACTAGCTGTGCCACTTTGATTATTTTT GGTACTAAATCCTGGGTTAGTTATGGCTCGTGACCTCACCAATTTATTTAAGGGGGCTGGACTTAGCCCTTTGTCTTTGG AATCCCTAAAATTTGAAAAATAGGACTTTGGTTTGAAATAACCAATTGTCTTCTTAGACTATGCTAGTCTGTAATGAGAA GGGACCAGCAGCTATAGCTGCCAGCTGGACTTAGAAGCCGTTTGTATACGGACTTATTGGAGCTTATCTACTAGAAAAGA CACTAGATAAGCTCCAATACGTCCTCTTTGGTTTGCATCAAACGGGTTGTTAGTCCAGATTAAGAAGTGAAGCTGACTCA TGACTTTTTTAAGGTAGCAGAGTAGAAGAAGGGAACTCACAGGGGGTTGTAATGAGGGAGACTCAGAGAATGTTGCTGTT TGGGCTTTGGAAAAGAAGTTCACCAGGAAAATTAGTAGCTTTATTTTGTTGAATTCCTTCGAGGTGAAGAGGAAACTGAA AGCAGGGCTAATAACCTGGAACTTCCTAATGCTATTAATGTTGAATTATCTTTCAGTAAGTGAATTATCTTTCAAAATCA GCCAGCAATCAGGTTCTTGGTCAAAAGAACAAAAGTACAAAACTAATACCTGATAGTGGAGGAACAAAATCTCTTCACTT GGATTCTTGTTAAGCTATCTAGGGAGGCTCCAATACATGCCGCTCCTCTGTCATCTGTCACCCATGATTTTAATTAGCTA GAACTGTAGTGGAGTTTCGCCCCCGACAATTTGGGAGTATAAGCACTTATGTAAAGCTTGTAAACCTTTTTTACTTTTCC TGATTGAATCCAAAATAAATAAAACAGATCACCTCAAGGTTGATCTGAAGTTTGATTGTGCTTTTGGAGTTGATGCTGGT AGTTTGTCACTTTGTCTGGGCATTTGTCTACTTTAGAGGAAACAAATTATAAAAGTAACATATCTTTTAGCTTTGGATTT TGCAACTACAGTCTCAATACATTGTAAATGTAATGCATCTTGTTTTAACTACAGAACAATTACTCCAAAAGTTAAGAAAT AATAGGTGGGAGTCATTGTTTGACAATGTCACAACATTTTGTATTAGCAATGTTATTGATATTCCTAGTTTGAATAGTTA GCAATGTAAGAGCTCGAGCTCAAACTGGTGCAGGACATCCTGAACCTATCTACGAAGATTCACAGAGCTACCTTCCTTTT TACCCCTCGTGAGGCAAATGTCTGCGCTGACAAACTAGCTAAGTGGGGACATAGTGTCACTGATTTTGTCTTTGATTGTG AAAATGCCCTTCCTTGGCTCATTCCTTGCTTAAGGAAAGATGTAAGAGGTGTTAGTACCTCTAGGCTCCTTTAGTTCTCT TGGGCTTTTAGCCCTCCACATTAGCAAAAAAAAAAAAGAGAGCTCGAGGTGAGCCTTGTCATAAAATTGAGGACACTCAT GTAACATGGAGCACCATTTAGATATGGTATATTTACAGTTGAATTTTCA
CDS sequence (LotjaGi4g1v0224600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAGCTCACTGCAATTGTTTCAACTTTCTCGATCTTAATACTTTGTTTTCAAATGCTCCTCCATGTTCATTCGAT ACCTCTCTTATTAGGAAACCAGGTTGATGAGGAATCTTCTGGTCGAAGGAATCTTAAACAGGAACCGGAGCATACTCGTG AAGTGCATTGCTCTAGAGAGAGAAGTAGGGTAGCATCGAAAGTAATAGAGGAGTATTTGACACCATTTGTGGAAAAAGAA AACTATCAGCTTTCAAGAAAGTGCAGACTTCACCCTGAGAATGATATGTTCAGGGATCAAGAAGAGAATAAAATTTACAT AGACTATCATGAGTGGCGATGTGGATATTGTAAGAAAAGCTTCCGTGAGGAAAAATTTCTTGATCAGCATTTTGATAACA GACACTACAATCTTCTGAATGCAAGTGATGGGAAGTGCTTGGCTGGTTTGTGTGGGGCATTGCATTGTGATGCTGTAATG AATTCCAAGTCCTCTAGATGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCTTCACCTATGTGAGAGTCTTGCTGACAG TTGTTTTCCTATAAGCGAGGGTCCATCAGCAAGCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACCT GCTCAGGGAAACATAAACCGTTCTCTAGAGGAGGCAAGGTTCAAGTAAGTTTCTTCCGCCTAGCTGCTGGAGCATTGATC TTAGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGGTTCAAAGTGATATGAAGAGTCGAACTCAAGAGCTTCGTCG CATCCCAAAAAGAGGGAAAGCAAAGCCATCATGA
Protein sequence (LotjaGi4g1v0224600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKLTAIVSTFSILILCFQMLLHVHSIPLLLGNQVDEESSGRRNLKQEPEHTREVHCSRERSRVASKVIEEYLTPFVEKE NYQLSRKCRLHPENDMFRDQEENKIYIDYHEWRCGYCKKSFREEKFLDQHFDNRHYNLLNASDGKCLAGLCGALHCDAVM NSKSSRCKCNPAAAARNLHLCESLADSCFPISEGPSASRLHELFLHQFCDAHTCSGKHKPFSRGGKVQVSFFRLAAGALI LVLLPVFYLFLYLVQSDMKSRTQELRRIPKRGKAKPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 3 | 275 | 273 | 5.2E-123 | – | |
| PANTHER | 3 | 275 | 273 | 5.2E-123 | – | |
| Phobius | 4 | 22 | 19 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 23 | 26 | 4 | - | – | |
| Phobius | 27 | 230 | 204 | - | – | |
| ProSiteProfiles | 112 | 135 | 24 | 8.517 | ||
| ProSitePatterns | 114 | 135 | 22 | - | ||
| Phobius | 231 | 254 | 24 | - | – | |
| TMHMM | 231 | 253 | 23 | - | – | |
| Phobius | 255 | 277 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi4g1v0224600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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