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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0227800 |
Transcript ID | LotjaGi4g1v0227800.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TAIR: AT4G24730.1 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like protein; Swiss-Prot: sp|Q8H5F8|ADPRM_ORYSJ Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TrEMBL-Plants: tr|A0A0B2PRR2|A0A0B2PRR2_GLYSO Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; Found in the gene: LotjaGi4g1v0227800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:53757631..53758611) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTTCTGCTAATGGACTCGAAATTGAGAAAGGGAAACAACCTCTCTTTTCGTTTGGATTGATATCTGATGTCCAATA CAGTGACATTCCTGATGGTCGTTCATTCCTCGGTGTTCCGCGGTACTATAGGCATAGCGTTTATGTGTTACAGAGAGCAG TCCAAAAATGGAACACTCATCATCATAGGCATAGATTTGTCATAAACTTTGGAGATATTGTTGATGGCTTTTGCCCAAAA GATCAATCTCTTAACACTGTCAAGAAAATTGTGGATGAATTTGAGGCTTTCAAGGGACCACTGTATCATTTGATTGGCAA TCACTGTCTGTACAATCTGCCTCGCAGAGAGTTACTTCCACTATTGAAGATCAAGAGTCTTAAAGGCCATGCTTACTATG ATTTTTCACCAGTGCCTCAATACAGATTTGTAGTTCTCGATGGATATGACATAAGTGCAATTGGTTGGCCTCAGGATCAT CCAAGAACATTGGTTGCTACGAAATTCCTCCAGGAGAAGAATCCAAATGAAGATAAGAACTGTCCAGCAGGTTTGGTGGG ACTTGAAAGAAGGTTTCTCAAGTTCAATGGAGCTGTTGGAAAGGAACAAATGGAATGGTTGAATGGTGTTCTTCAAGAAG CAACAAAATTGAAACAGAAAGTTGTGGTGTGTTGCCACTTGCCTCTGGATCCTGGTGCATCATCAAAGGAGGCATTGTTG TGGAATTATGATGAGGTGATGAGTTTGATACATAGATACAATTGTGTGAAGGTGTGTTTTTCTGGACATGATCACAAAGG TGGATACTCCATTGATTCACATGGTGTACACCATAGAGTTCTTGAAGCTGCTTTGGAATGTCCTCCTGGTACTGATGCAT TTGGTTATGTTGATGTTTATGATGACAGAATGTCACTTTATGGCACAGACAGAATGCGGAGTACAGACATGTATTTTAAT CCTAAAGTCGAATTGTCATGA
CDS sequence (LotjaGi4g1v0227800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTGCTAATGGACTCGAAATTGAGAAAGGGAAACAACCTCTCTTTTCGTTTGGATTGATATCTGATGTCCAATA CAGTGACATTCCTGATGGTCGTTCATTCCTCGGTGTTCCGCGGTACTATAGGCATAGCGTTTATGTGTTACAGAGAGCAG TCCAAAAATGGAACACTCATCATCATAGGCATAGATTTGTCATAAACTTTGGAGATATTGTTGATGGCTTTTGCCCAAAA GATCAATCTCTTAACACTGTCAAGAAAATTGTGGATGAATTTGAGGCTTTCAAGGGACCACTGTATCATTTGATTGGCAA TCACTGTCTGTACAATCTGCCTCGCAGAGAGTTACTTCCACTATTGAAGATCAAGAGTCTTAAAGGCCATGCTTACTATG ATTTTTCACCAGTGCCTCAATACAGATTTGTAGTTCTCGATGGATATGACATAAGTGCAATTGGTTGGCCTCAGGATCAT CCAAGAACATTGGTTGCTACGAAATTCCTCCAGGAGAAGAATCCAAATGAAGATAAGAACTGTCCAGCAGGTTTGGTGGG ACTTGAAAGAAGGTTTCTCAAGTTCAATGGAGCTGTTGGAAAGGAACAAATGGAATGGTTGAATGGTGTTCTTCAAGAAG CAACAAAATTGAAACAGAAAGTTGTGGTGTGTTGCCACTTGCCTCTGGATCCTGGTGCATCATCAAAGGAGGCATTGTTG TGGAATTATGATGAGGTGATGAGTTTGATACATAGATACAATTGTGTGAAGGTGTGTTTTTCTGGACATGATCACAAAGG TGGATACTCCATTGATTCACATGGTGTACACCATAGAGTTCTTGAAGCTGCTTTGGAATGTCCTCCTGGTACTGATGCAT TTGGTTATGTTGATGTTTATGATGACAGAATGTCACTTTATGGCACAGACAGAATGCGGAGTACAGACATGTATTTTAAT CCTAAAGTCGAATTGTCATGA
Protein sequence (LotjaGi4g1v0227800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSANGLEIEKGKQPLFSFGLISDVQYSDIPDGRSFLGVPRYYRHSVYVLQRAVQKWNTHHHRHRFVINFGDIVDGFCPK DQSLNTVKKIVDEFEAFKGPLYHLIGNHCLYNLPRRELLPLLKIKSLKGHAYYDFSPVPQYRFVVLDGYDISAIGWPQDH PRTLVATKFLQEKNPNEDKNCPAGLVGLERRFLKFNGAVGKEQMEWLNGVLQEATKLKQKVVVCCHLPLDPGASSKEALL WNYDEVMSLIHRYNCVKVCFSGHDHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRMSLYGTDRMRSTDMYFN PKVELS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 324 | 324 | 9.2E-208 | – | |
PANTHER | 1 | 324 | 324 | 9.2E-208 | – | |
Gene3D | 12 | 312 | 301 | 4.0E-112 | ||
SUPERFAMILY | 15 | 318 | 304 | 3.38E-69 | – | |
CDD | 17 | 306 | 290 | 4.20143E-108 | ||
Pfam | 18 | 266 | 249 | 4.4E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0227800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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